prot_M-pyrifera_M_contig98749.22726.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig98749.22726.1
Unique Nameprot_M-pyrifera_M_contig98749.22726.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length85
Homology
BLAST of mRNA_M-pyrifera_M_contig98749.22726.1 vs. uniprot
Match: A0A5Q2RL16_9ACTN (Transcriptional regulator WhiB n=1 Tax=Actinomarinicola tropica TaxID=2789776 RepID=A0A5Q2RL16_9ACTN)

HSP 1 Score: 130 bits (328), Expect = 7.720e-38
Identity = 61/79 (77.22%), Postives = 66/79 (83.54%), Query Frame = 0
Query:    4 WRNVASCRDTDPDLFFPVGTTGLAITQIEEAKEVCLGCAAQLQCLEFALRSNQDSGVWGGTSEEERRHLRRTYLGRRRS 82
            WR VASCRDTDPDLFFPVGTTG AI QIE AK VC  C AQ+ CLEFAL +NQDSG+WGGTSEEERR LRR +L RRR+
Sbjct:   20 WRRVASCRDTDPDLFFPVGTTGPAIEQIESAKAVCRTCEAQVPCLEFALSTNQDSGIWGGTSEEERRKLRRQWLARRRA 98          
BLAST of mRNA_M-pyrifera_M_contig98749.22726.1 vs. uniprot
Match: A0A7Y2IE04_9ACTN (Transcriptional regulator WhiB n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2IE04_9ACTN)

HSP 1 Score: 129 bits (324), Expect = 3.340e-37
Identity = 55/80 (68.75%), Postives = 65/80 (81.25%), Query Frame = 0
Query:    1 DTSWRNVASCRDTDPDLFFPVGTTGLAITQIEEAKEVCLGCAAQLQCLEFALRSNQDSGVWGGTSEEERRHLRRTYLGRR 80
            DTSWR  A+C DTDP LFFP+G TG A+ QI +A+ VC+ C+ Q  CLEFALRSNQD+G+WGG SEEERRHLRRTY+ RR
Sbjct:   23 DTSWRRTAACLDTDPSLFFPIGVTGAALQQITDARSVCMSCSCQEACLEFALRSNQDTGIWGGASEEERRHLRRTYINRR 102          
BLAST of mRNA_M-pyrifera_M_contig98749.22726.1 vs. uniprot
Match: A0A7Y2DQG9_9ACTN (Transcriptional regulator WhiB n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2DQG9_9ACTN)

HSP 1 Score: 127 bits (319), Expect = 1.070e-36
Identity = 54/77 (70.13%), Postives = 65/77 (84.42%), Query Frame = 0
Query:    4 WRNVASCRDTDPDLFFPVGTTGLAITQIEEAKEVCLGCAAQLQCLEFALRSNQDSGVWGGTSEEERRHLRRTYLGRR 80
            WR  A+CRDTDP LFFPVG TG A+ QIE+A+EVC+ C+ Q  CLEFALRSNQD+G+WGG SEEERRHLRRT++ +R
Sbjct:    3 WRRNAACRDTDPSLFFPVGVTGSALVQIEDAREVCMSCSCQEACLEFALRSNQDTGIWGGASEEERRHLRRTFINKR 79          
BLAST of mRNA_M-pyrifera_M_contig98749.22726.1 vs. uniprot
Match: A0A6G0A5P0_9ACTN (Transcriptional regulator WhiB n=2 Tax=Bacteria TaxID=2 RepID=A0A6G0A5P0_9ACTN)

HSP 1 Score: 124 bits (312), Expect = 1.440e-35
Identity = 58/81 (71.60%), Postives = 65/81 (80.25%), Query Frame = 0
Query:    1 DTSWRNVASCRDTDPDLFFPVGTTGLAITQIEEAKEVCLGCAAQLQCLEFALRSNQDSGVWGGTSEEERRHLRRTYLGRRR 81
            D  WR+VA+CRDTDPDLFFPVGTTG AI QIE AK VC  C A+  CLEFAL +NQDSGVWGGTSEEERR +RR +  R+R
Sbjct:    6 DDDWRDVAACRDTDPDLFFPVGTTGPAIEQIESAKAVCDACDAKSPCLEFALITNQDSGVWGGTSEEERRQIRRAWTARKR 86          
BLAST of mRNA_M-pyrifera_M_contig98749.22726.1 vs. uniprot
Match: A0A8F4FZ85_9ACTN (Transcriptional regulator WhiB n=1 Tax=Aquihabitans sp. G128 TaxID=2849779 RepID=A0A8F4FZ85_9ACTN)

HSP 1 Score: 124 bits (310), Expect = 3.090e-35
Identity = 57/78 (73.08%), Postives = 62/78 (79.49%), Query Frame = 0
Query:    4 WRNVASCRDTDPDLFFPVGTTGLAITQIEEAKEVCLGCAAQLQCLEFALRSNQDSGVWGGTSEEERRHLRRTYLGRRR 81
            WR  A+CRDTDPDLFFPVGTTG AI QIE AK VC  C AQ  CLEFAL +NQDSG+WGGTSEEERR LR+ Y  R+R
Sbjct:   11 WRRTAACRDTDPDLFFPVGTTGPAIEQIENAKAVCRQCDAQTACLEFALATNQDSGIWGGTSEEERRKLRKQYAARQR 88          
BLAST of mRNA_M-pyrifera_M_contig98749.22726.1 vs. uniprot
Match: R4Z5T5_9ACTN (Transcriptional regulator WhiB n=2 Tax=Candidatus Microthrix parvicella TaxID=41950 RepID=R4Z5T5_9ACTN)

HSP 1 Score: 124 bits (310), Expect = 3.580e-35
Identity = 55/78 (70.51%), Postives = 65/78 (83.33%), Query Frame = 0
Query:    4 WRNVASCRDTDPDLFFPVGTTGLAITQIEEAKEVCLGCAAQLQCLEFALRSNQDSGVWGGTSEEERRHLRRTYLGRRR 81
            WR+ A+CRDTDPDLFFP+GTTG AI QI+ AKEVC  C ++ QCLEFAL +NQDSG+WGGTSEEERR LRR ++  RR
Sbjct:   16 WRSTAACRDTDPDLFFPIGTTGPAIEQIDSAKEVCDACDSKAQCLEFALATNQDSGIWGGTSEEERRKLRRQWVAARR 93          
BLAST of mRNA_M-pyrifera_M_contig98749.22726.1 vs. uniprot
Match: UPI001F20C4C0 (WhiB family transcriptional regulator n=2 Tax=Rhabdothermincola TaxID=2820403 RepID=UPI001F20C4C0)

HSP 1 Score: 123 bits (308), Expect = 5.710e-35
Identity = 57/78 (73.08%), Postives = 64/78 (82.05%), Query Frame = 0
Query:    4 WRNVASCRDTDPDLFFPVGTTGLAITQIEEAKEVCLGCAAQLQCLEFALRSNQDSGVWGGTSEEERRHLRRTYLGRRR 81
            WR +A+CRDTDPDLFFPVGTTG AI QIE AK VCL C A+  CLEFAL +NQDSG+WGGTSEEERR LRR +L  +R
Sbjct:    8 WRALAACRDTDPDLFFPVGTTGPAIEQIEAAKAVCLECEARQPCLEFALTTNQDSGIWGGTSEEERRKLRRQWLAAKR 85          
BLAST of mRNA_M-pyrifera_M_contig98749.22726.1 vs. uniprot
Match: A0A2N5JV04_9ACTN (Transcriptional regulator WhiB n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A2N5JV04_9ACTN)

HSP 1 Score: 122 bits (307), Expect = 9.670e-35
Identity = 55/78 (70.51%), Postives = 65/78 (83.33%), Query Frame = 0
Query:    4 WRNVASCRDTDPDLFFPVGTTGLAITQIEEAKEVCLGCAAQLQCLEFALRSNQDSGVWGGTSEEERRHLRRTYLGRRR 81
            WR+VA+CRDT+PDLFFPVGTTGLA+ QIE AK VC  C AQ  CLEFAL +NQ+SGVWGGT+EEERR +R+ +L R R
Sbjct:   13 WRDVAACRDTEPDLFFPVGTTGLAVDQIEAAKAVCRRCQAQSACLEFALATNQESGVWGGTAEEERRKVRKAWLARHR 90          
BLAST of mRNA_M-pyrifera_M_contig98749.22726.1 vs. uniprot
Match: A0A359F228_9ACTN (Transcriptional regulator WhiB n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A359F228_9ACTN)

HSP 1 Score: 122 bits (306), Expect = 1.090e-34
Identity = 56/78 (71.79%), Postives = 66/78 (84.62%), Query Frame = 0
Query:    4 WRNVASCRDTDPDLFFPVGTTGLAITQIEEAKEVCLGCAAQLQCLEFALRSNQDSGVWGGTSEEERRHLRRTYLGRRR 81
            WR+VA+C+DTDPDLFFPVGTTG AI QIE AK VC  CAA+  CLEFAL +NQDSGVWGGTSE+ERR LRR ++ ++R
Sbjct:    6 WRDVAACQDTDPDLFFPVGTTGPAIEQIENAKSVCDACAAKEPCLEFALVTNQDSGVWGGTSEDERRKLRRAWVAKQR 83          
BLAST of mRNA_M-pyrifera_M_contig98749.22726.1 vs. uniprot
Match: A0A3N5KKD3_9ACTN (Transcriptional regulator WhiB n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A3N5KKD3_9ACTN)

HSP 1 Score: 122 bits (306), Expect = 1.220e-34
Identity = 56/78 (71.79%), Postives = 63/78 (80.77%), Query Frame = 0
Query:    4 WRNVASCRDTDPDLFFPVGTTGLAITQIEEAKEVCLGCAAQLQCLEFALRSNQDSGVWGGTSEEERRHLRRTYLGRRR 81
            WR  ++CRDTDPDLFFPVGTTG AI QI+ AK VC  C  Q QCLEFAL +NQDSGVWGGTSE+ERR LRR +L R+R
Sbjct:   10 WRAESACRDTDPDLFFPVGTTGPAIEQIDAAKAVCAKCPVQTQCLEFALATNQDSGVWGGTSEDERRRLRRAWLARQR 87          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig98749.22726.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5Q2RL16_9ACTN7.720e-3877.22Transcriptional regulator WhiB n=1 Tax=Actinomarin... [more]
A0A7Y2IE04_9ACTN3.340e-3768.75Transcriptional regulator WhiB n=1 Tax=Acidimicrob... [more]
A0A7Y2DQG9_9ACTN1.070e-3670.13Transcriptional regulator WhiB n=1 Tax=Acidimicrob... [more]
A0A6G0A5P0_9ACTN1.440e-3571.60Transcriptional regulator WhiB n=2 Tax=Bacteria Ta... [more]
A0A8F4FZ85_9ACTN3.090e-3573.08Transcriptional regulator WhiB n=1 Tax=Aquihabitan... [more]
R4Z5T5_9ACTN3.580e-3570.51Transcriptional regulator WhiB n=2 Tax=Candidatus ... [more]
UPI001F20C4C05.710e-3573.08WhiB family transcriptional regulator n=2 Tax=Rhab... [more]
A0A2N5JV04_9ACTN9.670e-3570.51Transcriptional regulator WhiB n=1 Tax=Actinomycet... [more]
A0A359F228_9ACTN1.090e-3471.79Transcriptional regulator WhiB n=1 Tax=Acidimicrob... [more]
A0A3N5KKD3_9ACTN1.220e-3471.79Transcriptional regulator WhiB n=1 Tax=Actinomycet... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR034768WhiB-like iron-sulfur binding domainPFAMPF02467Whibcoord: 4..72
e-value: 2.6E-22
score: 79.2
IPR034768WhiB-like iron-sulfur binding domainPROSITEPS516744FE4S_WBLcoord: 9..71
score: 25.121
NoneNo IPR availablePANTHERPTHR38839:SF7coord: 1..83
IPR003482Transcription factor WhiBPANTHERPTHR38839FAMILY NOT NAMEDcoord: 1..83
IPR003482Transcription factor WhiBHAMAPMF_01479WhiBcoord: 2..81
score: 16.384

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig98749contigM-pyrifera_M_contig98749:435..689 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig98749.22726.1mRNA_M-pyrifera_M_contig98749.22726.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig98749 435..689 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig98749.22726.1 ID=prot_M-pyrifera_M_contig98749.22726.1|Name=mRNA_M-pyrifera_M_contig98749.22726.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=85bp
DTSWRNVASCRDTDPDLFFPVGTTGLAITQIEEAKEVCLGCAAQLQCLEF
ALRSNQDSGVWGGTSEEERRHLRRTYLGRRRSRI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0347684FE4S_WBL
IPR003482Whib