prot_M-pyrifera_M_contig98675.22712.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig98675.22712.1
Unique Nameprot_M-pyrifera_M_contig98675.22712.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length155
Homology
BLAST of mRNA_M-pyrifera_M_contig98675.22712.1 vs. uniprot
Match: A0A0L0DV08_THETB (Na-Ca exchanger/integrin-beta4 n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DV08_THETB)

HSP 1 Score: 112 bits (279), Expect = 6.090e-26
Identity = 60/165 (36.36%), Postives = 95/165 (57.58%), Query Frame = 0
Query:    1 NLLIDPDRPYAYTCGQDTLEG-----GVVVYDITDPREPVQWAYFDEIYIHDIEVVKRADVGYVLYAAGIY----NSTVLILDVNDIPEGSINDQVIQHIDTIDMPHNTAQTEDDRFLYVSHEADAHPVTIWNVTDLNNIEAAGEMSVHVERSTIP-HNVYINGD 155
            N+ I+ DRPYAY CG D  +G     G+ VYD++DP  PV  A + + Y+HD+ V  R D GYVLYA GI     N ++ +L VND P G+  + +     T  + HN   T ++ +LYV+HE    PVTI+++ D++ ++   E+ +  +   +  HN ++ G+
Sbjct:  228 NIFIETDRPYAYVCGGDVTKGMASAGGIRVYDLSDPENPVSIATWGDFYVHDLVVQYREDAGYVLYACGINETPPNPSLFLLGVND-PAGAGVETISIWPTTYKLTHNAWPTLNNEYLYVTHEDIGSPVTIFDIRDVHAVKEVNEIYIVKDNDGVSAHNAFVKGE 391          
BLAST of mRNA_M-pyrifera_M_contig98675.22712.1 vs. uniprot
Match: A0A2E6SGF6_9BACT (Por_Secre_tail domain-containing protein n=1 Tax=Candidatus Marinimicrobia bacterium TaxID=2026760 RepID=A0A2E6SGF6_9BACT)

HSP 1 Score: 61.6 bits (148), Expect = 3.760e-8
Identity = 47/148 (31.76%), Postives = 71/148 (47.97%), Query Frame = 0
Query:    7 DRPYAYTCGQDTLEGGVVVYDITDPREPVQWAYFDEIYIHDIEVVKRADVGYVLYAAGIYNSTVLILDVNDIPEGSINDQVIQHIDTIDM-PHNTAQTEDDRFLYVSHE-ADAHPVTIWNVTDLNNIEAAGEMSVHVERSTIPHNVYI 152
            D  Y Y  G D   GGV +YDI+ P +P+   ++   Y HDI V        + Y+A IY   V ILDV++      N Q++ + +      HN   TED  +L V  E  + + + I+++ D  NI    E  V  ++  + HN YI
Sbjct:  404 DGNYLYVVGHDA--GGVEIYDISVPEDPLWAGHYSTYYYHDIYVKDG-----LAYSAAIYGDGVDILDVSN----PANIQLLANFNYEGSGAHNCWTTEDGNYLLVGDEIGNGNWIRIFDIQDFENINMVSEYIV--DQDAVVHNCYI 538          
BLAST of mRNA_M-pyrifera_M_contig98675.22712.1 vs. uniprot
Match: A0A521WS30_9BACT (Choice-of-anchor B family protein n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A521WS30_9BACT)

HSP 1 Score: 57.0 bits (136), Expect = 1.530e-6
Identity = 46/150 (30.67%), Postives = 68/150 (45.33%), Query Frame = 0
Query:   10 YAYTCG-QDTLEGGVVVYDITDPREPVQWAYFDEIYIHDIEVVKRADVGYVLYAAGIYNSTVLILDVND----IPEGSINDQVIQHIDTIDMPHNTAQTEDDRFLYVSHEADAHPVT--IWNVTDLNNIEAAGEMSVHVERSTIPHNVYI 152
            Y Y  G  D +  G V++D++DP  PV        Y HD  V  R D    L+ A IY+  + I DV+D     P G                HN A T D R+L  + E +  P T  IW++T+L+N+    E     + + + HNV++
Sbjct:  151 YLYLNGCADWIYSGAVIFDLSDPENPVYSGMTQARYFHDSFV--RNDT---LFGATIYDGGIDIFDVSDKTNPTPLGRFTYPFAG-------THNCATTSDGRYLLTTDEINNTPKTLKIWDITNLSNVTKVAEYQS--DPTAVVHNVFV 286          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig98675.22712.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A0L0DV08_THETB6.090e-2636.36Na-Ca exchanger/integrin-beta4 n=1 Tax=Thecamonas ... [more]
A0A2E6SGF6_9BACT3.760e-831.76Por_Secre_tail domain-containing protein n=1 Tax=C... [more]
A0A521WS30_9BACT1.530e-630.67Choice-of-anchor B family protein n=1 Tax=Bacteroi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..155
e-value: 1.1E-5
score: 26.8
IPR011048Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamilySUPERFAMILY51004C-terminal (heme d1) domain of cytochrome cd1-nitrite reductasecoord: 2..129

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig98675contigM-pyrifera_M_contig98675:2..697 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig98675.22712.1mRNA_M-pyrifera_M_contig98675.22712.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig98675 2..697 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig98675.22712.1 ID=prot_M-pyrifera_M_contig98675.22712.1|Name=mRNA_M-pyrifera_M_contig98675.22712.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=155bp
NLLIDPDRPYAYTCGQDTLEGGVVVYDITDPREPVQWAYFDEIYIHDIEV
VKRADVGYVLYAAGIYNSTVLILDVNDIPEGSINDQVIQHIDTIDMPHNT
AQTEDDRFLYVSHEADAHPVTIWNVTDLNNIEAAGEMSVHVERSTIPHNV
YINGD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR011048Haem_d1_sf