mRNA_M-pyrifera_M_contig98525.22690.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig98525.22690.1
Unique NamemRNA_M-pyrifera_M_contig98525.22690.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig98525.22690.1 vs. uniprot
Match: A0A6I6AKB5_9PLAN (Methylthioribose-1-phosphate isomerase n=12 Tax=Gimesia TaxID=1649453 RepID=A0A6I6AKB5_9PLAN)

HSP 1 Score: 446 bits (1147), Expect = 3.740e-156
Identity = 229/232 (98.71%), Postives = 230/232 (99.14%), Query Frame = 1 
Query:    1 SRPTAVNLFWALDRLQKLAADSADLDSGDMHALLLEEARRIEVEDLEMCHKIGEVGAALLSPGDGVLTHCNAGGLATSGGGTALAVFFEAARQGKGIHVYADETRPLLQGARLTTWELMQRNVPVTLISDSMAGWVMKEGKIQAVVTGADRIAANGDSANKIGTYSVALLASLHDIPFYIAAPSSTFDLSLESGAEIPIEERQPEEITNGFGKQTAPEGVDVYNTAFDVTQA 696
            SRPTAVNLFWALDRLQKLAADSADLDSG+MHALLLEEARRIEVEDLEMCHKIGEVGAALLSPGDGVLTHCNAGGLATSGGGTALAVFFEAARQGKGIHVYADETRPLLQGARLTTWELMQRNVPVTLISDSMAGWVMKEGKIQAVVTGADRIAANGDSANKIGTYSVALLASLHDIPFYIAAPSSTFDLSLESGAEIPIEERQPEEITNGFGKQTAPEGVDVYN AFDVT A
Sbjct:   99 SRPTAVNLFWALDRLQKLAADSADLDSGEMHALLLEEARRIEVEDLEMCHKIGEVGAALLSPGDGVLTHCNAGGLATSGGGTALAVFFEAARQGKGIHVYADETRPLLQGARLTTWELMQRNVPVTLISDSMAGWVMKEGKIQAVVTGADRIAANGDSANKIGTYSVALLASLHDIPFYIAAPSSTFDLSLESGAEIPIEERQPEEITNGFGKQTAPEGVDVYNPAFDVTPA 330
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BLAST of mRNA_M-pyrifera_M_contig98525.22690.1 vs. uniprot
Match: A0A518I7J1_9PLAN (Methylthioribose-1-phosphate isomerase n=2 Tax=Gimesia TaxID=1649453 RepID=A0A518I7J1_9PLAN)

HSP 1 Score: 401 bits (1030), Expect = 2.200e-138
Identity = 206/232 (88.79%), Postives = 216/232 (93.10%), Query Frame = 1 
Query:    1 SRPTAVNLFWALDRLQKLAADSADLDSGDMHALLLEEARRIEVEDLEMCHKIGEVGAALLSPGDGVLTHCNAGGLATSGGGTALAVFFEAARQGKGIHVYADETRPLLQGARLTTWELMQRNVPVTLISDSMAGWVMKEGKIQAVVTGADRIAANGDSANKIGTYSVALLASLHDIPFYIAAPSSTFDLSLESGAEIPIEERQPEEITNGFGKQTAPEGVDVYNTAFDVTQA 696
            SRPTAVNLFWAL+R+QKLA  S DL + +MH LLLEEA+ IEVEDL+MCH+IGEVGA LLS GDGVLTHCNAGGLATSGGGTALAVFFEAARQGK IHVYADETRPLLQGARLTTWELMQR +PVTLISDSMAGWVMKE KIQAVVTGADRIAANGD+ANKIGTYSVALLASLHDIPFYIAAPSSTFDLSLESG EIPIEER PEEITNGFGKQTAP+GVDVYN AFDVT A
Sbjct:   99 SRPTAVNLFWALERMQKLAESSPDLSNPEMHKLLLEEAQLIEVEDLKMCHQIGEVGAELLSKGDGVLTHCNAGGLATSGGGTALAVFFEAARQGKQIHVYADETRPLLQGARLTTWELMQRGIPVTLISDSMAGWVMKEQKIQAVVTGADRIAANGDAANKIGTYSVALLASLHDIPFYIAAPSSTFDLSLESGEEIPIEERLPEEITNGFGKQTAPDGVDVYNPAFDVTPA 330
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BLAST of mRNA_M-pyrifera_M_contig98525.22690.1 vs. uniprot
Match: A6C0G9_9PLAN (Methylthioribose-1-phosphate isomerase n=13 Tax=Planctomycetaceae TaxID=126 RepID=A6C0G9_9PLAN)

HSP 1 Score: 388 bits (996), Expect = 3.250e-133
Identity = 201/232 (86.64%), Postives = 211/232 (90.95%), Query Frame = 1 
Query:    1 SRPTAVNLFWALDRLQKLAADSADLDSGDMHALLLEEARRIEVEDLEMCHKIGEVGAALLSPGDGVLTHCNAGGLATSGGGTALAVFFEAARQGKGIHVYADETRPLLQGARLTTWELMQRNVPVTLISDSMAGWVMKEGKIQAVVTGADRIAANGDSANKIGTYSVALLASLHDIPFYIAAPSSTFDLSLESGAEIPIEERQPEEITNGFGKQTAPEGVDVYNTAFDVTQA 696
            SRPTAVNLFWALDRLQ LAA    L + DMH  LLEEA+RIE EDLEMCHKIGEVGA LLS GDGVLTHCNAGGLATSGGGTAL+VFFEAARQGK I VYADETRPLLQGARLTTWELMQR++PVTLI+DSMAGWVM+E KIQAVVTGADRIAANGDSANKIGTYSVALLA LH+IPFYIAAPSSTFDLSL SG++IPIEER PEEITNGFGKQTAP GVDVYN AFDVT A
Sbjct:   99 SRPTAVNLFWALDRLQNLAASLPVLSNTDMHTRLLEEAKRIEQEDLEMCHKIGEVGAELLSKGDGVLTHCNAGGLATSGGGTALSVFFEAARQGKEIRVYADETRPLLQGARLTTWELMQRSIPVTLITDSMAGWVMQEQKIQAVVTGADRIAANGDSANKIGTYSVALLARLHEIPFYIAAPSSTFDLSLASGSQIPIEERLPEEITNGFGKQTAPVGVDVYNPAFDVTPA 330
[Close]
BLAST of mRNA_M-pyrifera_M_contig98525.22690.1 vs. uniprot
Match: A0A517W293_9PLAN (Methylthioribose-1-phosphate isomerase n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517W293_9PLAN)

HSP 1 Score: 382 bits (980), Expect = 8.770e-131
Identity = 197/232 (84.91%), Postives = 210/232 (90.52%), Query Frame = 1 
Query:    1 SRPTAVNLFWALDRLQKLAADSADLDSGDMHALLLEEARRIEVEDLEMCHKIGEVGAALLSPGDGVLTHCNAGGLATSGGGTALAVFFEAARQGKGIHVYADETRPLLQGARLTTWELMQRNVPVTLISDSMAGWVMKEGKIQAVVTGADRIAANGDSANKIGTYSVALLASLHDIPFYIAAPSSTFDLSLESGAEIPIEERQPEEITNGFGKQTAPEGVDVYNTAFDVTQA 696
            SRPTAVNLFWAL+RLQKLA  S +L  G+MH  LL++A +IE EDL+MCHKIGEVGA LLS GDGVLTHCNAGGLATSGGGTAL+VFFEAARQGK IHVYADETRPLLQGARLTTWELMQR +PVTLISDSMAGWVM+E KIQAVVTGADRIAANGD+ANKIGTYSVALLA  H IPFYIAAPSSTFDLSLESG +IPIEER  EEIT+GFGKQTAPEGVDVYN AFDVT A
Sbjct:   99 SRPTAVNLFWALERLQKLADLSPELSGGEMHQRLLDDALKIEQEDLQMCHKIGEVGARLLSKGDGVLTHCNAGGLATSGGGTALSVFFEAARQGKEIHVYADETRPLLQGARLTTWELMQREIPVTLISDSMAGWVMQEKKIQAVVTGADRIAANGDAANKIGTYSVALLAHAHGIPFYIAAPSSTFDLSLESGNQIPIEERLAEEITHGFGKQTAPEGVDVYNPAFDVTPA 330
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BLAST of mRNA_M-pyrifera_M_contig98525.22690.1 vs. uniprot
Match: A0A1I3IBT6_9PLAN (Methylthioribose-1-phosphate isomerase n=2 Tax=Planctomicrobium piriforme TaxID=1576369 RepID=A0A1I3IBT6_9PLAN)

HSP 1 Score: 338 bits (867), Expect = 1.120e-113
Identity = 176/232 (75.86%), Postives = 191/232 (82.33%), Query Frame = 1 
Query:    1 SRPTAVNLFWALDRLQKLAADSADLDSGDMHALLLEEARRIEVEDLEMCHKIGEVGAALLSPGDGVLTHCNAGGLATSGGGTALAVFFEAARQGKGIHVYADETRPLLQGARLTTWELMQRNVPVTLISDSMAGWVMKEGKIQAVVTGADRIAANGDSANKIGTYSVALLASLHDIPFYIAAPSSTFDLSLESGAEIPIEERQPEEITNGFGKQTAPEGVDVYNTAFDVTQA 696
            SRPTAVNLFWALDRL   AA  A L   +MHA LLEEA+ IE ED EMC  IG  GAALL+ G GVLTHCNAGGLAT+G GTALAV F AA +GK I VYADETRPLLQGARLTTWEL QR VPVTLI D+MAGWVMKE ++QAV+TGADRIAANGDSANKIGTYSVALLA  H IPFY+AAPSSTFDL+L+SG +IPIE+R  EEITNGFG+ TAPEG  VYN AFDV  A
Sbjct:   98 SRPTAVNLFWALDRLNATAARFAQLSPQEMHARLLEEAKAIETEDREMCAAIGRHGAALLADGMGVLTHCNAGGLATAGDGTALAVMFAAAAEGKQIQVYADETRPLLQGARLTTWELQQRGVPVTLICDNMAGWVMKEKRVQAVITGADRIAANGDSANKIGTYSVALLAKAHGIPFYVAAPSSTFDLTLKSGEDIPIEQRAAEEITNGFGRATAPEGTQVYNPAFDVAPA 329
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BLAST of mRNA_M-pyrifera_M_contig98525.22690.1 vs. uniprot
Match: A0A3E0Q4G2_9BACT (Methylthioribose-1-phosphate isomerase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3E0Q4G2_9BACT)

HSP 1 Score: 337 bits (863), Expect = 3.970e-113
Identity = 174/232 (75.00%), Postives = 192/232 (82.76%), Query Frame = 1 
Query:    1 SRPTAVNLFWALDRLQKLAADSADLDSGDMHALLLEEARRIEVEDLEMCHKIGEVGAALLSPGDGVLTHCNAGGLATSGGGTALAVFFEAARQGKGIHVYADETRPLLQGARLTTWELMQRNVPVTLISDSMAGWVMKEGKIQAVVTGADRIAANGDSANKIGTYSVALLASLHDIPFYIAAPSSTFDLSLESGAEIPIEERQPEEITNGFGKQTAPEGVDVYNTAFDVTQA 696
            SRPTAVNLFWA+DR+ ++AA S    + ++   LLEEAR IE ED EMC  IG  GA LL  G GVLTHCNAGGLAT+G GTAL+VFF AA  GK IHVYADETRPLLQGARLTTWEL +R +PVTLI DSMAGWVMKEGK+QAVVTGADRIAANGD+ANKIGTYSVALLA  H IPFY+AAPSSTFD SL +GA+IPIE+R  +EITNGFGKQTAP  VDVYN AFDVT A
Sbjct:   93 SRPTAVNLFWAIDRMGQVAASSDSDSARELAEQLLEEAREIEREDREMCAAIGRHGAELLEEGSGVLTHCNAGGLATAGDGTALSVFFAAAAAGKSIHVYADETRPLLQGARLTTWELQRRRIPVTLICDSMAGWVMKEGKVQAVVTGADRIAANGDAANKIGTYSVALLARAHGIPFYVAAPSSTFDFSLATGADIPIEQRNAKEITNGFGKQTAPVDVDVYNPAFDVTPA 324
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BLAST of mRNA_M-pyrifera_M_contig98525.22690.1 vs. uniprot
Match: UPI001423AFA2 (S-methyl-5-thioribose-1-phosphate isomerase n=1 Tax=Rubinisphaera sp. JC658 TaxID=2713176 RepID=UPI001423AFA2)

HSP 1 Score: 336 bits (862), Expect = 7.570e-113
Identity = 174/232 (75.00%), Postives = 192/232 (82.76%), Query Frame = 1 
Query:    1 SRPTAVNLFWALDRLQKLAADSADLDSGDMHALLLEEARRIEVEDLEMCHKIGEVGAALLSPGDGVLTHCNAGGLATSGGGTALAVFFEAARQGKGIHVYADETRPLLQGARLTTWELMQRNVPVTLISDSMAGWVMKEGKIQAVVTGADRIAANGDSANKIGTYSVALLASLHDIPFYIAAPSSTFDLSLESGAEIPIEERQPEEITNGFGKQTAPEGVDVYNTAFDVTQA 696
            SRPTAVNLFWAL+R+ + AAD  +  S  +   LLEEARRIE+ED EMC  IG  GA LL+ G GVLTHCNAGGLAT+G GTAL+V F AA  GK + VYADETRPLLQGARLT+WELMQRNVPVT+I DSMAGWVMKEG++QAVVTGADRIA NGD+ANKIGTYSVALLA  H IPFY+AAPSSTFDLSL SG EIPIEER P EITNG G+QTAP+G  VYN AFDVT A
Sbjct:  103 SRPTAVNLFWALERMSQFAADRPEEASTKLLPKLLEEARRIELEDREMCAAIGRHGAELLADGSGVLTHCNAGGLATAGDGTALSVIFAAAASGKQLQVYADETRPLLQGARLTSWELMQRNVPVTVICDSMAGWVMKEGRVQAVVTGADRIAGNGDAANKIGTYSVALLAKEHGIPFYVAAPSSTFDLSLSSGEEIPIEERDPLEITNGMGRQTAPDGAHVYNPAFDVTPA 334
[Close]
BLAST of mRNA_M-pyrifera_M_contig98525.22690.1 vs. uniprot
Match: A0A517ZAD1_9PLAN (Methylthioribose-1-phosphate isomerase n=2 Tax=Maioricimonas rarisocia TaxID=2528026 RepID=A0A517ZAD1_9PLAN)

HSP 1 Score: 334 bits (856), Expect = 5.770e-112
Identity = 172/232 (74.14%), Postives = 189/232 (81.47%), Query Frame = 1 
Query:    1 SRPTAVNLFWALDRLQKLAADSADLDSGDMHALLLEEARRIEVEDLEMCHKIGEVGAALLSPGDGVLTHCNAGGLATSGGGTALAVFFEAARQGKGIHVYADETRPLLQGARLTTWELMQRNVPVTLISDSMAGWVMKEGKIQAVVTGADRIAANGDSANKIGTYSVALLASLHDIPFYIAAPSSTFDLSLESGAEIPIEERQPEEITNGFGKQTAPEGVDVYNTAFDVTQA 696
            SRPTAVNLFWAL+RL +LA   ADL        LLEEAR IE ED EMC  IG  GA LL+ G GVLTHCNAGGLAT+G GTAL+V F AA QGK + VYADETRPLLQGARLTTWEL QR VP TLI DSMAGW MKEG+I AV+TGADRIAANGD+ANKIGTYSVALLA  H IPFY+AAPSSTFDL L +GA+IPIE+R PEE+T+GFGKQTAP+G+ VYN AFDVT A
Sbjct:   97 SRPTAVNLFWALNRLNRLAETLADLTPAQQLERLLEEAREIEEEDREMCAAIGRHGADLLADGTGVLTHCNAGGLATAGDGTALSVIFAAAAQGKTLQVYADETRPLLQGARLTTWELQQRGVPATLICDSMAGWAMKEGRISAVITGADRIAANGDAANKIGTYSVALLAKAHGIPFYVAAPSSTFDLELATGADIPIEQRAPEEVTHGFGKQTAPDGIGVYNPAFDVTPA 328
[Close]
BLAST of mRNA_M-pyrifera_M_contig98525.22690.1 vs. uniprot
Match: A0A2E7CZ21_9PLAN (Methylthioribose-1-phosphate isomerase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E7CZ21_9PLAN)

HSP 1 Score: 332 bits (851), Expect = 1.400e-111
Identity = 168/232 (72.41%), Postives = 193/232 (83.19%), Query Frame = 1 
Query:    1 SRPTAVNLFWALDRLQKLAADSADLDSGDMHALLLEEARRIEVEDLEMCHKIGEVGAALLSPGDGVLTHCNAGGLATSGGGTALAVFFEAARQGKGIHVYADETRPLLQGARLTTWELMQRNVPVTLISDSMAGWVMKEGKIQAVVTGADRIAANGDSANKIGTYSVALLASLHDIPFYIAAPSSTFDLSLESGAEIPIEERQPEEITNGFGKQTAPEGVDVYNTAFDVTQA 696
            SRPTAVNLFWALDR++++AA   D DS  +   LL EA+ IE+ED EMC  IG  GA LL  G GVLTHCNAGGLAT+G GTAL+V F AA QGK + VYADETRPLLQGARLT WEL QR++PVT+I D+MAGWVMKE ++QA+VTGADRIAANGD+ANKIGTYSVALLA  H IPFY+AAPSSTFD+SL +G +IPIEER+PEEIT+GFGKQTAPEGV+ YN AFDV  A
Sbjct:   74 SRPTAVNLFWALDRMREVAASCGDADSESIWQRLLAEAKAIELEDREMCAAIGRHGAELLQDGTGVLTHCNAGGLATAGDGTALSVIFAAAAQGKQLQVYADETRPLLQGARLTAWELQQRDIPVTVICDNMAGWVMKERRVQAIVTGADRIAANGDAANKIGTYSVALLARAHGIPFYVAAPSSTFDMSLATGEDIPIEERKPEEITHGFGKQTAPEGVNTYNPAFDVAPA 305
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BLAST of mRNA_M-pyrifera_M_contig98525.22690.1 vs. uniprot
Match: A0A5B9P508_9BACT (Methylthioribose-1-phosphate isomerase n=1 Tax=Mariniblastus fucicola TaxID=980251 RepID=A0A5B9P508_9BACT)

HSP 1 Score: 331 bits (848), Expect = 7.020e-111
Identity = 169/232 (72.84%), Postives = 191/232 (82.33%), Query Frame = 1 
Query:    1 SRPTAVNLFWALDRLQKLAADSADLDSGDMHALLLEEARRIEVEDLEMCHKIGEVGAALLSPGDGVLTHCNAGGLATSGGGTALAVFFEAARQGKGIHVYADETRPLLQGARLTTWELMQRNVPVTLISDSMAGWVMKEGKIQAVVTGADRIAANGDSANKIGTYSVALLASLHDIPFYIAAPSSTFDLSLESGAEIPIEERQPEEITNGFGKQTAPEGVDVYNTAFDVTQA 696
            SRPTAVNLFWALDRL+KL AD++ L + DM A LL+EA+ I  ED EMCH IG  GA LL    GVLTHCNAGGLAT+  GTAL+VFF A  QG  +HV+ DETRPLLQGARLT WELMQR++  TLI DSMA  VM+EGK+QAVVTGADRIAANGDSANKIGTYS+A+LA  H IPFYIAAPSSTFDL+++SG EIPIE+R   EITNGFGKQTAP+GV+VYN AFDVT A
Sbjct:   93 SRPTAVNLFWALDRLRKLVADNSSLSAADMRAKLLDEAKAIHAEDREMCHSIGRFGAGLLENVSGVLTHCNAGGLATAEYGTALSVFFTAQDQGHNLHVFVDETRPLLQGARLTAWELMQRDIKATLICDSMAAQVMREGKVQAVVTGADRIAANGDSANKIGTYSIAVLAKAHGIPFYIAAPSSTFDLAIDSGDEIPIEQRAAIEITNGFGKQTAPDGVEVYNPAFDVTPA 324
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig98525.22690.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6I6AKB5_9PLAN3.740e-15698.71Methylthioribose-1-phosphate isomerase n=12 Tax=Gi... [more]
A0A518I7J1_9PLAN2.200e-13888.79Methylthioribose-1-phosphate isomerase n=2 Tax=Gim... [more]
A6C0G9_9PLAN3.250e-13386.64Methylthioribose-1-phosphate isomerase n=13 Tax=Pl... [more]
A0A517W293_9PLAN8.770e-13184.91Methylthioribose-1-phosphate isomerase n=2 Tax=Gim... [more]
A0A1I3IBT6_9PLAN1.120e-11375.86Methylthioribose-1-phosphate isomerase n=2 Tax=Pla... [more]
A0A3E0Q4G2_9BACT3.970e-11375.00Methylthioribose-1-phosphate isomerase n=1 Tax=Pla... [more]
UPI001423AFA27.570e-11375.00S-methyl-5-thioribose-1-phosphate isomerase n=1 Ta... [more]
A0A517ZAD1_9PLAN5.770e-11274.14Methylthioribose-1-phosphate isomerase n=2 Tax=Mai... [more]
A0A2E7CZ21_9PLAN1.400e-11172.41Methylthioribose-1-phosphate isomerase n=1 Tax=Pla... [more]
A0A5B9P508_9BACT7.020e-11172.84Methylthioribose-1-phosphate isomerase n=1 Tax=Mar... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig98525contigM-pyrifera_M_contig98525:3..698 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score390.2
Seed ortholog evalue6.8e-106
Seed eggNOG ortholog344747.PM8797T_04555
Preferred namemtnA
KEGG rclassRC01151,RC01939
KEGG koko:K08963,ko:K08964
KEGG ReactionR04420,R07392
KEGG Pathwayko00270,ko01100,map00270,map01100
KEGG ModuleM00034
Hectar predicted targeting categoryother localisation
GOsGO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0019509,GO:0019752,GO:0043094,GO:0043102,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046523,GO:0071265,GO:0071267,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607
EggNOG free text desc.Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
EggNOG OGs2IWRJ@203682,COG0182@1,COG0182@2
EC4.2.1.109,5.3.1.23
COG Functional cat.J
BiGG ReactioniAF987.Gmet_0072,iJN678.slr1938
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons1
Model size696
Cds size696
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816902.6743507-CDS-M-pyrifera_M_contig98525:2..6981622816902.6743507-CDS-M-pyrifera_M_contig98525:2..698Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig98525 3..698 +
1692278245.8425407-CDS-M-pyrifera_M_contig98525:2..6981692278245.8425407-CDS-M-pyrifera_M_contig98525:2..698Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig98525 3..698 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig98525.22690.1prot_M-pyrifera_M_contig98525.22690.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig98525 3..698 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig98525.22690.1

>prot_M-pyrifera_M_contig98525.22690.1 ID=prot_M-pyrifera_M_contig98525.22690.1|Name=mRNA_M-pyrifera_M_contig98525.22690.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=232bp
SRPTAVNLFWALDRLQKLAADSADLDSGDMHALLLEEARRIEVEDLEMCH
KIGEVGAALLSPGDGVLTHCNAGGLATSGGGTALAVFFEAARQGKGIHVY
ADETRPLLQGARLTTWELMQRNVPVTLISDSMAGWVMKEGKIQAVVTGAD
RIAANGDSANKIGTYSVALLASLHDIPFYIAAPSSTFDLSLESGAEIPIE
ERQPEEITNGFGKQTAPEGVDVYNTAFDVTQA
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mRNA from alignment at M-pyrifera_M_contig98525:3..698+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig98525.22690.1 ID=mRNA_M-pyrifera_M_contig98525.22690.1|Name=mRNA_M-pyrifera_M_contig98525.22690.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=696bp|location=Sequence derived from alignment at M-pyrifera_M_contig98525:3..698+ (Macrocystis pyrifera P11B4 male)
AGTCGGCCGACGGCGGTGAACCTGTTCTGGGCACTTGATCGCTTGCAGAA
GCTGGCTGCGGATTCAGCGGATCTGGACAGCGGTGACATGCATGCGCTGC
TGCTGGAAGAAGCACGGCGGATTGAGGTCGAAGACTTGGAGATGTGTCAT
AAAATCGGTGAAGTAGGAGCGGCGCTGCTCTCTCCCGGTGATGGTGTGTT
GACACACTGCAATGCCGGCGGCTTGGCGACTTCGGGTGGAGGGACGGCCC
TGGCGGTCTTCTTCGAAGCGGCCAGGCAGGGGAAGGGAATTCACGTTTAC
GCGGACGAGACCCGTCCGTTATTACAGGGCGCGCGACTGACGACCTGGGA
ACTGATGCAGCGGAATGTTCCCGTGACTCTCATCAGTGACTCGATGGCGG
GCTGGGTCATGAAAGAAGGCAAGATCCAGGCCGTGGTGACCGGAGCAGAC
CGGATCGCCGCCAATGGTGATTCCGCAAATAAGATCGGCACGTATTCCGT
CGCACTGCTGGCAAGTCTGCACGATATCCCTTTTTATATCGCCGCGCCGT
CAAGTACGTTCGACTTAAGCCTGGAAAGCGGTGCCGAGATTCCGATTGAA
GAACGGCAACCGGAGGAGATCACCAACGGATTTGGCAAACAGACTGCGCC
AGAAGGTGTTGATGTTTACAACACTGCGTTTGATGTGACACAGGCA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig98525:3..698+

>mRNA_M-pyrifera_M_contig98525.22690.1 ID=mRNA_M-pyrifera_M_contig98525.22690.1|Name=mRNA_M-pyrifera_M_contig98525.22690.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1392bp|location=Sequence derived from alignment at M-pyrifera_M_contig98525:3..698+ (Macrocystis pyrifera P11B4 male)
AGTCGGCCGACGGCGGTGAACCTGTTCTGGGCACTTGATCGCTTGCAGAA
GCTGGCTGCGGATTCAGCGGATCTGGACAGCGGTGACATGCATGCGCTGC
TGCTGGAAGAAGCACGGCGGATTGAGGTCGAAGACTTGGAGATGTGTCAT
AAAATCGGTGAAGTAGGAGCGGCGCTGCTCTCTCCCGGTGATGGTGTGTT
GACACACTGCAATGCCGGCGGCTTGGCGACTTCGGGTGGAGGGACGGCCC
TGGCGGTCTTCTTCGAAGCGGCCAGGCAGGGGAAGGGAATTCACGTTTAC
GCGGACGAGACCCGTCCGTTATTACAGGGCGCGCGACTGACGACCTGGGA
ACTGATGCAGCGGAATGTTCCCGTGACTCTCATCAGTGACTCGATGGCGG
GCTGGGTCATGAAAGAAGGCAAGATCCAGGCCGTGGTGACCGGAGCAGAC
CGGATCGCCGCCAATGGTGATTCCGCAAATAAGATCGGCACGTATTCCGT
CGCACTGCTGGCAAGTCTGCACGATATCCCTTTTTATATCGCCGCGCCGT
CAAGTACGTTCGACTTAAGCCTGGAAAGCGGTGCCGAGATTCCGATTGAA
GAACGGCAACCGGAGGAGATCACCAACGGATTTGGCAAACAGACTGCGCC
AGAAGGTGTTGATGTTTACAACACTGCGTTTGATGTGACACAGGCAAGTC
GGCCGACGGCGGTGAACCTGTTCTGGGCACTTGATCGCTTGCAGAAGCTG
GCTGCGGATTCAGCGGATCTGGACAGCGGTGACATGCATGCGCTGCTGCT
GGAAGAAGCACGGCGGATTGAGGTCGAAGACTTGGAGATGTGTCATAAAA
TCGGTGAAGTAGGAGCGGCGCTGCTCTCTCCCGGTGATGGTGTGTTGACA
CACTGCAATGCCGGCGGCTTGGCGACTTCGGGTGGAGGGACGGCCCTGGC
GGTCTTCTTCGAAGCGGCCAGGCAGGGGAAGGGAATTCACGTTTACGCGG
ACGAGACCCGTCCGTTATTACAGGGCGCGCGACTGACGACCTGGGAACTG
ATGCAGCGGAATGTTCCCGTGACTCTCATCAGTGACTCGATGGCGGGCTG
GGTCATGAAAGAAGGCAAGATCCAGGCCGTGGTGACCGGAGCAGACCGGA
TCGCCGCCAATGGTGATTCCGCAAATAAGATCGGCACGTATTCCGTCGCA
CTGCTGGCAAGTCTGCACGATATCCCTTTTTATATCGCCGCGCCGTCAAG
TACGTTCGACTTAAGCCTGGAAAGCGGTGCCGAGATTCCGATTGAAGAAC
GGCAACCGGAGGAGATCACCAACGGATTTGGCAAACAGACTGCGCCAGAA
GGTGTTGATGTTTACAACACTGCGTTTGATGTGACACAGGCA
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