mRNA_M-pyrifera_M_contig98065.22580.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig98065.22580.1 vs. uniprot
Match: UPI00145A363C (DUF2189 domain-containing protein n=1 Tax=Nitratireductor sp. XY-223 TaxID=2561926 RepID=UPI00145A363C) HSP 1 Score: 192 bits (488), Expect = 5.170e-59 Identity = 96/132 (72.73%), Postives = 113/132 (85.61%), Query Frame = 1 Query: 1 FVAWMVVAQSIYEWLYGAAQPTSIFSFIGDVLTTQRGWALIIVGNTVGFVFAVVVLCTTVIAFPLLLDRNVGITSAIGTSIRAVRTNPVPMAAWGLIVSLALLIGAIPMLIGLAITIPVLGHATWHLYRKVI 396 FVAWM AQ+IY+ LYG A P SI++F+G VL+TQ+GW LIIVGN VGFVFA+VVLCTTVIAFPLLLDR+VG SAI TS+RAV NPV M WGLIV++ LLIG+IP+L+GLAI +PVLGHATWHLYRKV+ Sbjct: 131 FVAWMYAAQAIYQGLYGQAAPDSIWAFVGSVLSTQQGWMLIIVGNAVGFVFALVVLCTTVIAFPLLLDRDVGAYSAIETSVRAVAANPVQMILWGLIVAITLLIGSIPLLVGLAIVMPVLGHATWHLYRKVV 262
BLAST of mRNA_M-pyrifera_M_contig98065.22580.1 vs. uniprot
Match: A0A0Q6M4E3_9HYPH (Cytochrome C oxidase subunit I n=14 Tax=Phyllobacteriaceae TaxID=69277 RepID=A0A0Q6M4E3_9HYPH) HSP 1 Score: 187 bits (475), Expect = 9.030e-57 Identity = 88/133 (66.17%), Postives = 112/133 (84.21%), Query Frame = 1 Query: 1 FVAWMVVAQSIYEWLYGAAQPTSIFSFIGDVLTTQRGWALIIVGNTVGFVFAVVVLCTTVIAFPLLLDRNVGITSAIGTSIRAVRTNPVPMAAWGLIVSLALLIGAIPMLIGLAITIPVLGHATWHLYRKVIE 399 FVAW++VAQ +Y WLYGA P S +F D+ TTQRGW LI++GN +GF+FA+VVLCTTV+AFPLLLD +VG +A+ TS+RAV++NPVPM WGLIV++ALLIG++P L GLA+ IPVLGHATWHLYRKV++ Sbjct: 131 FVAWLLVAQGLYAWLYGADAPQSTAAFFEDLFTTQRGWTLIVLGNLIGFLFALVVLCTTVVAFPLLLDCDVGAYAAVETSVRAVQSNPVPMLLWGLIVAVALLIGSLPFLAGLAVVIPVLGHATWHLYRKVVD 263
BLAST of mRNA_M-pyrifera_M_contig98065.22580.1 vs. uniprot
Match: A0A7R7H980_9HYPH (Uncharacterized protein n=2 Tax=unclassified Mesorhizobium TaxID=325217 RepID=A0A7R7H980_9HYPH) HSP 1 Score: 186 bits (473), Expect = 1.710e-56 Identity = 91/133 (68.42%), Postives = 111/133 (83.46%), Query Frame = 1 Query: 1 FVAWMVVAQSIYEWLYGAAQPTSIFSFIGDVLTTQRGWALIIVGNTVGFVFAVVVLCTTVIAFPLLLDRNVGITSAIGTSIRAVRTNPVPMAAWGLIVSLALLIGAIPMLIGLAITIPVLGHATWHLYRKVIE 399 FV W++VAQ +Y WLYG+A P S +F+GD+ TTQRGW LIIVGN +GF+FA+VVL TTVIAFPLLLD +VG +AI TS R+V NPVPM WGLIV++ALLIG+IP+L GLA+ IPVLGHATWHLYRKV++ Sbjct: 131 FVTWLLVAQGLYAWLYGSAAPESTAAFLGDLFTTQRGWTLIIVGNLIGFLFALVVLSTTVIAFPLLLDCDVGAYAAIETSARSVLANPVPMLLWGLIVAVALLIGSIPLLAGLAVVIPVLGHATWHLYRKVVD 263
BLAST of mRNA_M-pyrifera_M_contig98065.22580.1 vs. uniprot
Match: H0HKZ4_9HYPH (Cytochrome c oxidase subunit I n=2 Tax=Mesorhizobium TaxID=68287 RepID=H0HKZ4_9HYPH) HSP 1 Score: 184 bits (466), Expect = 1.390e-55 Identity = 86/134 (64.18%), Postives = 111/134 (82.84%), Query Frame = 1 Query: 1 FVAWMVVAQSIYEWLYGAAQPTSIFSFIGDVLTTQRGWALIIVGNTVGFVFAVVVLCTTVIAFPLLLDRNVGITSAIGTSIRAVRTNPVPMAAWGLIVSLALLIGAIPMLIGLAITIPVLGHATWHLYRKVIET 402 F+AW++ AQ+++ WLYGA PTSI F+ DV TTQRGW LI++GN +GF+FA+VVL TTVIAFPLLLDR+VG +AI TS R + NPVP+ WGLIV++AL+ G++P+ +GLAI IPVLGH+TWHLYRKV+ET Sbjct: 133 FIAWLLAAQALFNWLYGADVPTSITGFVSDVFTTQRGWTLILLGNAIGFLFALVVLSTTVIAFPLLLDRDVGAYAAIETSARVMIANPVPIVLWGLIVAVALVAGSLPLFVGLAIVIPVLGHSTWHLYRKVVET 266
BLAST of mRNA_M-pyrifera_M_contig98065.22580.1 vs. uniprot
Match: A0A502YER2_9HYPH (DUF2189 domain-containing protein n=8 Tax=Mesorhizobium TaxID=68287 RepID=A0A502YER2_9HYPH) HSP 1 Score: 183 bits (465), Expect = 2.610e-55 Identity = 86/133 (64.66%), Postives = 113/133 (84.96%), Query Frame = 1 Query: 1 FVAWMVVAQSIYEWLYGAAQPTSIFSFIGDVLTTQRGWALIIVGNTVGFVFAVVVLCTTVIAFPLLLDRNVGITSAIGTSIRAVRTNPVPMAAWGLIVSLALLIGAIPMLIGLAITIPVLGHATWHLYRKVIE 399 F+AW+V A+++Y +LYG A P S F FI DVLTTQRGW LII+GN +GF+FA+VVL TTV+AFPLLLDR++G +A+ TS RAV TNPVP+ WGLIV++AL +G++P+L+GLA+ +PVLGH+TWHLYRK+IE Sbjct: 132 FIAWLVTARALYGYLYGDAAPASFFGFIADVLTTQRGWTLIILGNLIGFLFALVVLSTTVVAFPLLLDRDIGAYAAVETSARAVITNPVPLLLWGLIVAVALGLGSLPLLVGLAVVLPVLGHSTWHLYRKLIE 264
BLAST of mRNA_M-pyrifera_M_contig98065.22580.1 vs. uniprot
Match: A0A2N5AW69_RHILI (Uncharacterized protein n=1 Tax=Rhizobium loti TaxID=381 RepID=A0A2N5AW69_RHILI) HSP 1 Score: 182 bits (461), Expect = 1.050e-54 Identity = 87/133 (65.41%), Postives = 111/133 (83.46%), Query Frame = 1 Query: 1 FVAWMVVAQSIYEWLYGAAQPTSIFSFIGDVLTTQRGWALIIVGNTVGFVFAVVVLCTTVIAFPLLLDRNVGITSAIGTSIRAVRTNPVPMAAWGLIVSLALLIGAIPMLIGLAITIPVLGHATWHLYRKVIE 399 F AWM+ A ++Y LYG A P S+F FIGDVLTT+RGW LII+GN +GF+FA+VVL TTV+AFPLLLDR++G +AI TS RAV TNPVP+ WGLIV++AL G++P+L+GLA+ +PVLGH+TWHLYRK+IE Sbjct: 131 FAAWMLTAHALYARLYGDAVPASLFGFIGDVLTTKRGWMLIILGNFIGFLFALVVLSTTVVAFPLLLDRDIGAYAAIETSARAVMTNPVPLLLWGLIVAVALAAGSLPLLVGLAVVLPVLGHSTWHLYRKLIE 263
BLAST of mRNA_M-pyrifera_M_contig98065.22580.1 vs. uniprot
Match: X6IDW2_9HYPH (Cytochrome C oxidase subunit I n=36 Tax=Bacteria TaxID=2 RepID=X6IDW2_9HYPH) HSP 1 Score: 180 bits (457), Expect = 2.910e-54 Identity = 82/133 (61.65%), Postives = 109/133 (81.95%), Query Frame = 1 Query: 1 FVAWMVVAQSIYEWLYGAAQPTSIFSFIGDVLTTQRGWALIIVGNTVGFVFAVVVLCTTVIAFPLLLDRNVGITSAIGTSIRAVRTNPVPMAAWGLIVSLALLIGAIPMLIGLAITIPVLGHATWHLYRKVIE 399 F+AW++ AQ YE+L+G A P SI FI ++ T RGW+LI++G+ +GFVFA VVLCTTV+AFPLLLDR+VG AI TS+RAV NP+PMA WGLIV++AL+IG++P+ GLA+ +P+LGHATWH+YRKV+E Sbjct: 131 FIAWLLAAQVFYEYLFGPAPPVSISGFINEIFATGRGWSLIVLGHAIGFVFAAVVLCTTVVAFPLLLDRDVGAYEAIHTSVRAVLANPIPMAVWGLIVAVALIIGSLPVFAGLAVVLPILGHATWHVYRKVVE 263
BLAST of mRNA_M-pyrifera_M_contig98065.22580.1 vs. uniprot
Match: A0A7X0FCW9_9HYPH (Putative membrane protein n=1 Tax=Aminobacter aganoensis TaxID=83264 RepID=A0A7X0FCW9_9HYPH) HSP 1 Score: 177 bits (450), Expect = 6.380e-54 Identity = 81/133 (60.90%), Postives = 106/133 (79.70%), Query Frame = 1 Query: 1 FVAWMVVAQSIYEWLYGAAQPTSIFSFIGDVLTTQRGWALIIVGNTVGFVFAVVVLCTTVIAFPLLLDRNVGITSAIGTSIRAVRTNPVPMAAWGLIVSLALLIGAIPMLIGLAITIPVLGHATWHLYRKVIE 399 F+ W+ AQ+++ WLYG + P + F DVLTTQRGW LII+GN +GF+FA+V L TTVIAFPLLLDR++G +A+ TS RA+ NP+PM WGLIV++ L+IG +P+L+GLAI +PVLGH+TWHLYRKVIE Sbjct: 75 FIVWLFTAQALFSWLYGDSAPATFFGLASDVLTTQRGWTLIILGNVIGFLFALVALSTTVIAFPLLLDRDIGAYAAVETSARAIMANPMPMLLWGLIVAVGLVIGTLPLLVGLAIVLPVLGHSTWHLYRKVIE 207
BLAST of mRNA_M-pyrifera_M_contig98065.22580.1 vs. uniprot
Match: A0A5B8L0W5_9HYPH (DUF2189 domain-containing protein n=1 Tax=Nitratireductor sp. SY7 TaxID=2599600 RepID=A0A5B8L0W5_9HYPH) HSP 1 Score: 179 bits (455), Expect = 6.730e-54 Identity = 87/138 (63.04%), Postives = 112/138 (81.16%), Query Frame = 1 Query: 1 FVAWMVVAQSIYEWLYGAAQPTSIFSFIGDVLTTQRGWALIIVGNTVGFVFAVVVLCTTVIAFPLLLDRNVGITSAIGTSIRAVRTNPVPMAAWGLIVSLALLIGAIPMLIGLAITIPVLGHATWHLYRK-VIETDKP 411 F+ W+ AQ++Y WL+G QP SI +F+ ++ TTQ+GW LIIVGN VGF+FA+VVL TTVIAFPLLLDR+VG +AI TS RAV NPVPM WGLIV++AL++G++P+L GLA+ IPVLGH+TWHLYRK ++ T KP Sbjct: 131 FLVWLYSAQALYAWLFGTGQPQSIGAFLSNLFTTQQGWTLIIVGNVVGFLFALVVLATTVIAFPLLLDRDVGAYAAIETSARAVLANPVPMLFWGLIVAVALVVGSLPLLAGLAVVIPVLGHSTWHLYRKAIVSTGKP 268
BLAST of mRNA_M-pyrifera_M_contig98065.22580.1 vs. uniprot
Match: A0A1I3WD22_9HYPH (Uncharacterized membrane protein n=1 Tax=Mesorhizobium albiziae TaxID=335020 RepID=A0A1I3WD22_9HYPH) HSP 1 Score: 178 bits (451), Expect = 2.090e-53 Identity = 87/133 (65.41%), Postives = 106/133 (79.70%), Query Frame = 1 Query: 1 FVAWMVVAQSIYEWLYGAAQPTSIFSFIGDVLTTQRGWALIIVGNTVGFVFAVVVLCTTVIAFPLLLDRNVGITSAIGTSIRAVRTNPVPMAAWGLIVSLALLIGAIPMLIGLAITIPVLGHATWHLYRKVIE 399 FVAW++ AQ IY+W +G P S+ SFI +VL TQRGW LIIVGN VG +FA+VVL TTVIAFP+LLDR++G AI TS +AV TNPV MA WGLIV+ L+IG+IP+ GLA+ IP+LGHATWHLYRK+IE Sbjct: 131 FVAWLLTAQGIYQWYFGPTPPESLSSFISEVLGTQRGWMLIIVGNLVGLIFAIVVLATTVIAFPILLDRDIGAYDAIYTSAKAVMTNPVTMAIWGLIVAALLVIGSIPVFAGLAVVIPILGHATWHLYRKLIE 263 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig98065.22580.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig98065.22580.1 >prot_M-pyrifera_M_contig98065.22580.1 ID=prot_M-pyrifera_M_contig98065.22580.1|Name=mRNA_M-pyrifera_M_contig98065.22580.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=135bp MVVAQSIYEWLYGAAQPTSIFSFIGDVLTTQRGWALIIVGNTVGFVFAVVback to top mRNA from alignment at M-pyrifera_M_contig98065:285..701- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig98065.22580.1 ID=mRNA_M-pyrifera_M_contig98065.22580.1|Name=mRNA_M-pyrifera_M_contig98065.22580.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=417bp|location=Sequence derived from alignment at M-pyrifera_M_contig98065:285..701- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig98065:285..701- >mRNA_M-pyrifera_M_contig98065.22580.1 ID=mRNA_M-pyrifera_M_contig98065.22580.1|Name=mRNA_M-pyrifera_M_contig98065.22580.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=810bp|location=Sequence derived from alignment at M-pyrifera_M_contig98065:285..701- (Macrocystis pyrifera P11B4 male)back to top |