mRNA_M-pyrifera_M_contig97910.22546.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig97910.22546.1
Unique NamemRNA_M-pyrifera_M_contig97910.22546.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig97910.22546.1 vs. uniprot
Match: A0A0P7Z4V5_9GAMM (Phenol 2-monooxygenase P3 subunit n=31 Tax=Bacteria TaxID=2 RepID=A0A0P7Z4V5_9GAMM)

HSP 1 Score: 468 bits (1203), Expect = 2.050e-162
Identity = 212/232 (91.38%), Postives = 221/232 (95.26%), Query Frame = 1
Query:    1 GFRLLSLVNMMKEYMLPNKVMSWSEAWEVYYEQNGGALFKDLERYGIRPPKYQDVANYGKHHISHQLWGTFYQYSQATNFHTWIPGKEEMDWMSEKYPETFDKYYRPRYEHWAKEHAEGRRFYNNTLPQLCQVCQVPTLFTEMGEPTKLSHRQMNYEGERYHFCSEACCDIFKHEPEKYVQAWLPVHQIYQGNCEGGDVETVVQKYYHINIGEDNFEYVGSPDHKRWLSIKG 696
            GFRLLSLV+MM +YMLPNKVMSWSEAWEVYYEQNGGALFKDLERYGIRPPKYQDVAN  KHH+SHQLW TFYQYSQATNFHTWIP KEEMDWMSEKYP+TFDKYYRPRYEH AKE A GRRFYNNTLPQLCQVCQVPTLFTEMG PTKLSHRQ+ YEGERYHFCSEACC+IF+HEPEKY+QAWLPVHQIYQGNCEG DVETVVQKYYHINIGEDNFEY+GSPDHKRWLSIKG
Sbjct:  269 GFRLLSLVSMMMDYMLPNKVMSWSEAWEVYYEQNGGALFKDLERYGIRPPKYQDVANDAKHHLSHQLWTTFYQYSQATNFHTWIPEKEEMDWMSEKYPDTFDKYYRPRYEHLAKEAAAGRRFYNNTLPQLCQVCQVPTLFTEMGAPTKLSHRQLKYEGERYHFCSEACCEIFEHEPEKYIQAWLPVHQIYQGNCEGADVETVVQKYYHINIGEDNFEYLGSPDHKRWLSIKG 500          
BLAST of mRNA_M-pyrifera_M_contig97910.22546.1 vs. uniprot
Match: Q84AQ2_PSEST (Phenol hydroxylase component PheN n=24 Tax=Gammaproteobacteria TaxID=1236 RepID=Q84AQ2_PSEST)

HSP 1 Score: 450 bits (1157), Expect = 1.970e-155
Identity = 202/233 (86.70%), Postives = 216/233 (92.70%), Query Frame = 1
Query:    1 GFRLLSLVNMMKEYMLPNKVMSWSEAWEVYYEQNGGALFKDLERYGIRPPKYQDVANYGKHHISHQLWGTFYQYSQATNFHTWIPGKEEMDWMSEKYPETFDKYYRPRYEHWAKEHAEGRRFYNNTLPQLCQVCQVPTLFTEMGEPTKLSHRQMNYEGERYHFCSEACCDIFKHEPEKYVQAWLPVHQIYQGNCEGGDVETVVQKYYHINIGEDNFEYVGSPDHKRWLSIKGK 699
            GFRLLSLV+MM +YMLPNKVMSWSEAWEVYYEQNGGALFKDLERYGIRPPKYQDVAN  KHH+SHQLW TFYQY QATNFHTWIP KEEMDWMSEKYP+TFDKYYRPRYE+ AKE A GRRFYNNTLPQLCQVCQ+PT+FTE   PT LSHRQ+ +EGERYHFCS+ CCDIFKHEPEKY+QAWLPVHQIYQGNCEGGD+ETVVQKYYHINIGEDNF+YVGSPD K WLSIKG+
Sbjct:  269 GFRLLSLVSMMMDYMLPNKVMSWSEAWEVYYEQNGGALFKDLERYGIRPPKYQDVANDAKHHLSHQLWTTFYQYCQATNFHTWIPEKEEMDWMSEKYPDTFDKYYRPRYEYLAKEAAAGRRFYNNTLPQLCQVCQIPTIFTEKDAPTMLSHRQIEHEGERYHFCSDGCCDIFKHEPEKYIQAWLPVHQIYQGNCEGGDLETVVQKYYHINIGEDNFDYVGSPDQKHWLSIKGR 501          
BLAST of mRNA_M-pyrifera_M_contig97910.22546.1 vs. uniprot
Match: A0A1I5ZTM7_9GAMM (Phenol hydroxylase P3 protein n=10 Tax=Pseudomonadales TaxID=72274 RepID=A0A1I5ZTM7_9GAMM)

HSP 1 Score: 431 bits (1109), Expect = 4.010e-148
Identity = 187/232 (80.60%), Postives = 212/232 (91.38%), Query Frame = 1
Query:    1 GFRLLSLVNMMKEYMLPNKVMSWSEAWEVYYEQNGGALFKDLERYGIRPPKYQDVANYGKHHISHQLWGTFYQYSQATNFHTWIPGKEEMDWMSEKYPETFDKYYRPRYEHWAKEHAEGRRFYNNTLPQLCQVCQVPTLFTEMGEPTKLSHRQMNYEGERYHFCSEACCDIFKHEPEKYVQAWLPVHQIYQGNCEGGDVETVVQKYYHINIGEDNFEYVGSPDHKRWLSIKG 696
            G+RLLSLV+MM +YMLPNKVMSW +AWEVYYEQNGGALF+DLERYGIRPPKYQD AN GKHHISHQLW TFYQYSQATNFHTWIP + EM+W+SE+YP+TFDKYYRPR+EHW K+  +G RFYNNTLPQLCQVCQVPTLFTE  +PT+LSHR + ++GERYHFCS+ CCDIFKHEPEKY+QAWLPVHQIYQGNCEG D+ETVV KYYHINIG+DN EY+GSPDH+RW +IKG
Sbjct:  269 GYRLLSLVSMMMDYMLPNKVMSWKDAWEVYYEQNGGALFRDLERYGIRPPKYQDDANKGKHHISHQLWSTFYQYSQATNFHTWIPSEAEMNWLSEQYPDTFDKYYRPRFEHWQKQQEKGERFYNNTLPQLCQVCQVPTLFTEPDDPTQLSHRSLVHDGERYHFCSDGCCDIFKHEPEKYIQAWLPVHQIYQGNCEGADLETVVAKYYHINIGQDNLEYLGSPDHRRWQAIKG 500          
BLAST of mRNA_M-pyrifera_M_contig97910.22546.1 vs. uniprot
Match: A0A4P6WCX8_9GAMM (Toluene-4-monooxygenase system, hydroxylase component subunit alpha n=7 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A4P6WCX8_9GAMM)

HSP 1 Score: 426 bits (1096), Expect = 3.880e-146
Identity = 188/232 (81.03%), Postives = 206/232 (88.79%), Query Frame = 1
Query:    1 GFRLLSLVNMMKEYMLPNKVMSWSEAWEVYYEQNGGALFKDLERYGIRPPKYQDVANYGKHHISHQLWGTFYQYSQATNFHTWIPGKEEMDWMSEKYPETFDKYYRPRYEHWAKEHAEGRRFYNNTLPQLCQVCQVPTLFTEMGEPTKLSHRQMNYEGERYHFCSEACCDIFKHEPEKYVQAWLPVHQIYQGNCEGGDVETVVQKYYHINIGEDNFEYVGSPDHKRWLSIKG 696
            GFRLLSLV MM +YMLPNKVMSWSEAWEVYYEQNGGALFKDLERYGIRPPKYQDVAN  K H+SHQ W TFYQYSQATNFHTW+P +EEM W+SEKYPETFDKYYR R+EHW KEH +GRRFYNNTLPQLCQVCQ+P +FTE  +PT  SHRQ+ +EGERYHFCS+ CCDIFK+EPEKY+QAWLPVHQIYQGNC G DV TVV+KYYHIN+G DN EY GSPDH+RWL IKG
Sbjct:  269 GFRLLSLVGMMMDYMLPNKVMSWSEAWEVYYEQNGGALFKDLERYGIRPPKYQDVANAAKDHVSHQAWSTFYQYSQATNFHTWMPEEEEMAWLSEKYPETFDKYYRARFEHWDKEHKQGRRFYNNTLPQLCQVCQIPVMFTEKDDPTVFSHRQIKHEGERYHFCSDGCCDIFKNEPEKYIQAWLPVHQIYQGNCGGADVPTVVEKYYHINLGVDNLEYHGSPDHERWLDIKG 500          
BLAST of mRNA_M-pyrifera_M_contig97910.22546.1 vs. uniprot
Match: A0A7V7GVR0_9PSED (YHS domain-containing protein n=7 Tax=root TaxID=1 RepID=A0A7V7GVR0_9PSED)

HSP 1 Score: 425 bits (1093), Expect = 1.140e-145
Identity = 186/233 (79.83%), Postives = 209/233 (89.70%), Query Frame = 1
Query:    1 GFRLLSLVNMMKEYMLPNKVMSWSEAWEVYYEQNGGALFKDLERYGIRPPKYQDVANYGKHHISHQLWGTFYQYSQATNFHTWIPGKEEMDWMSEKYPETFDKYYRPRYEHWAKEHAEGRRFYNNTLPQLCQVCQVPTLFTEMGEPTKLSHRQMNYEGERYHFCSEACCDIFKHEPEKYVQAWLPVHQIYQGNCEGGDVETVVQKYYHINIGEDNFEYVGSPDHKRWLSIKGK 699
            G+RLLSLV+MM +YMLPNKVMSW +AWEVYYEQNGGALFKDLERYGIRPPKYQD AN GK HISHQLW TFYQYSQATNFHTWIP +EEM+W+SE+YP+TFD+YYRPR+EHW     +G RFYNNTLPQLCQVCQVP LFTE  +PTKLSHR + +EGERYHFCS+ CCDIFK+EP+KY+QAWLPVHQIYQGNCEG DVETVV KYYHI+ G DNFEY+GSPDHKRW +IKG+
Sbjct:  269 GYRLLSLVSMMMDYMLPNKVMSWKDAWEVYYEQNGGALFKDLERYGIRPPKYQDEANKGKEHISHQLWATFYQYSQATNFHTWIPSEEEMNWLSEQYPDTFDQYYRPRFEHWQALQEKGERFYNNTLPQLCQVCQVPALFTEPDDPTKLSHRSLEHEGERYHFCSDGCCDIFKYEPDKYIQAWLPVHQIYQGNCEGADVETVVTKYYHIDAGRDNFEYLGSPDHKRWQAIKGQ 501          
BLAST of mRNA_M-pyrifera_M_contig97910.22546.1 vs. uniprot
Match: A0A2N1Z5Q9_9GAMM (Phenol 2-monooxygenase n=1 Tax=Gammaproteobacteria bacterium HGW-Gammaproteobacteria-11 TaxID=2013793 RepID=A0A2N1Z5Q9_9GAMM)

HSP 1 Score: 411 bits (1057), Expect = 2.970e-140
Identity = 180/233 (77.25%), Postives = 204/233 (87.55%), Query Frame = 1
Query:    1 GFRLLSLVNMMKEYMLPNKVMSWSEAWEVYYEQNGGALFKDLERYGIRPPKYQDVANYGKHHISHQLWGTFYQYSQATNFHTWIPGKEEMDWMSEKYPETFDKYYRPRYEHWAKEHAEGRRFYNNTLPQLCQVCQVPTLFTEMGEPTKLSHRQMNYEGERYHFCSEACCDIFKHEPEKYVQAWLPVHQIYQGNCEGGDVETVVQKYYHINIGEDNFEYVGSPDHKRWLSIKGK 699
            GFRLLSLV+MM +YMLPNKVMSW +AWEVYYE+ GGALFKDL RYGIRPPKYQDVAN  K HISHQLW TFYQY  ATNFHTW+P ++EM W+SE+YP+TFD+YYRPR+EHW     +  RFYNNTLPQLCQVCQVPTLFTE  +PT +SHR   +EGERYHFCS+ CCDIF++EPEKYVQAWLPVHQIYQGNCEGGDVETVV KYYHI IG+DNFEY+GS DH+RWL++KGK
Sbjct:  269 GFRLLSLVSMMMDYMLPNKVMSWKQAWEVYYEEAGGALFKDLARYGIRPPKYQDVANKAKDHISHQLWSTFYQYGHATNFHTWMPSEDEMAWLSEQYPDTFDQYYRPRFEHWQALQEKDERFYNNTLPQLCQVCQVPTLFTETDDPTTISHRSTEFEGERYHFCSDGCCDIFQYEPEKYVQAWLPVHQIYQGNCEGGDVETVVSKYYHIEIGKDNFEYLGSQDHQRWLALKGK 501          
BLAST of mRNA_M-pyrifera_M_contig97910.22546.1 vs. uniprot
Match: A0A4P8YT71_PSEOL (DmpN n=20 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A4P8YT71_PSEOL)

HSP 1 Score: 409 bits (1051), Expect = 2.820e-139
Identity = 176/231 (76.19%), Postives = 205/231 (88.74%), Query Frame = 1
Query:    1 GFRLLSLVNMMKEYMLPNKVMSWSEAWEVYYEQNGGALFKDLERYGIRPPKYQDVANYGKHHISHQLWGTFYQYSQATNFHTWIPGKEEMDWMSEKYPETFDKYYRPRYEHWAKEHAEGRRFYNNTLPQLCQVCQVPTLFTEMGEPTKLSHRQMNYEGERYHFCSEACCDIFKHEPEKYVQAWLPVHQIYQGNCEGGDVETVVQKYYHINIGEDNFEYVGSPDHKRWLSIK 693
            G+RLLSLV MM +YMLPNKVMSW+EAWEVYYEQNGGALFKDLERYGIRPPKYQD A  GK HI+HQ+W TFYQY  ATNFHTWIP +EE  W++EKYP++FDKYYRPR++HW ++HA+G+RFYN TLPQLCQVCQVP LFTE  +PT LSHRQ+ +EGERYHFCS+ CC+IF+HEPEKY+QAWLPVHQIYQGNCEGGDV+TVV+KYYH+  G DN EYVGSP++ RWL+ K
Sbjct:  269 GYRLLSLVGMMMDYMLPNKVMSWAEAWEVYYEQNGGALFKDLERYGIRPPKYQDQATIGKQHITHQIWATFYQYCHATNFHTWIPSQEEQQWLAEKYPDSFDKYYRPRFDHWQEQHAKGQRFYNYTLPQLCQVCQVPALFTEPDDPTTLSHRQIEHEGERYHFCSDGCCEIFQHEPEKYIQAWLPVHQIYQGNCEGGDVQTVVEKYYHLKNGVDNLEYVGSPEYLRWLAWK 499          
BLAST of mRNA_M-pyrifera_M_contig97910.22546.1 vs. uniprot
Match: DMPN_PSEUF (Phenol 2-monooxygenase, oxygenase component DmpN n=35 Tax=Bacteria TaxID=2 RepID=DMPN_PSEUF)

HSP 1 Score: 391 bits (1005), Expect = 2.610e-132
Identity = 169/234 (72.22%), Postives = 203/234 (86.75%), Query Frame = 1
Query:    1 GFRLLSLVNMMKEYMLPNKVMSWSEAWEVYYEQNGGALFKDLERYGIRPPKYQDVANYGKHHISHQLWGTFYQYSQATNFHTWIPGKEEMDWMSEKYPETFDKYYRPRYEHWAKEHAEGRRFYNNTLPQLCQVCQVPTLFTEMGEPTKLSHRQMNYEGERYHFCSEACCDIFKHEPEKYVQAWLPVHQIYQGNCEGGDVETVVQKYYHINIGEDNFEYVGSPDHKRWLSIKGKS 702
            G+RLL+L+ MM +YMLPNKVMSWSEAW VY+EQ GGALFKDLERYGIRPPKY +    GK HI+HQ+WG  YQYS+AT+FHTWIPG EE++W+SEKYP+TFDKYYRPR+E W ++ A+G RFYN+TLP LCQVCQ+P +FTE  +PTKLS R + +EGERY FCS+ CCDIFK+EP KY+QAWLPVHQIYQGNCEGGDVETVVQKYYHI  G DN EY+GSP+H+RWL++KG++
Sbjct:  270 GYRLLTLIGMMMDYMLPNKVMSWSEAWGVYFEQAGGALFKDLERYGIRPPKYVEQTTIGKEHITHQVWGALYQYSKATSFHTWIPGDEELNWLSEKYPDTFDKYYRPRFEFWREQQAKGERFYNDTLPHLCQVCQLPVIFTEPDDPTKLSLRSLVHEGERYQFCSDGCCDIFKNEPVKYIQAWLPVHQIYQGNCEGGDVETVVQKYYHIKSGVDNLEYLGSPEHQRWLALKGQT 503          
BLAST of mRNA_M-pyrifera_M_contig97910.22546.1 vs. uniprot
Match: A0A2P6JIY3_9PSED (Phenol 2-monooxygenase n=1 Tax=Pseudomonas sp. MYb185 TaxID=1848729 RepID=A0A2P6JIY3_9PSED)

HSP 1 Score: 389 bits (999), Expect = 1.810e-131
Identity = 171/227 (75.33%), Postives = 194/227 (85.46%), Query Frame = 1
Query:    1 GFRLLSLVNMMKEYMLPNKVMSWSEAWEVYYEQNGGALFKDLERYGIRPPKYQDVANYGKHHISHQLWGTFYQYSQATNFHTWIPGKEEMDWMSEKYPETFDKYYRPRYEHWAKEHAEGRRFYNNTLPQLCQVCQVPTLFTEMGEPTKLSHRQMNYEGERYHFCSEACCDIFKHEPEKYVQAWLPVHQIYQGNCEGGDVETVVQKYYHINIGEDNFEYVGSPDHKRW 681
            G RLLSLV MM +YMLPNKVMSW+EAWEVY+EQ GGALFKDLERYGIRPPKY +     K H+SHQ W TFYQYSQATNFHTW+P  EEMDW+SEKYPETFDKYYR R+  W ++  +G RFYN TLPQLCQVCQ+P +FTE G+PT LSHR   +EGERYHFCS+ CCDIF++EP+KYVQAWLPVHQIYQGNCEG DVE+VV+ YY INIGEDNFEY+GSPDH+RW
Sbjct:  269 GNRLLSLVGMMMDYMLPNKVMSWAEAWEVYFEQAGGALFKDLERYGIRPPKYVEQCAEAKQHVSHQTWATFYQYSQATNFHTWMPSDEEMDWLSEKYPETFDKYYRARFTFWREQQEKGERFYNGTLPQLCQVCQIPVIFTEPGDPTTLSHRSHVHEGERYHFCSDGCCDIFRNEPQKYVQAWLPVHQIYQGNCEGSDVESVVRDYYRINIGEDNFEYLGSPDHRRW 495          
BLAST of mRNA_M-pyrifera_M_contig97910.22546.1 vs. uniprot
Match: K6YKD3_9ALTE (Phenol hydroxylase P3 protein n=1 Tax=Paraglaciecola arctica BSs20135 TaxID=493475 RepID=K6YKD3_9ALTE)

HSP 1 Score: 387 bits (994), Expect = 9.390e-131
Identity = 170/232 (73.28%), Postives = 198/232 (85.34%), Query Frame = 1
Query:    1 GFRLLSLVNMMKEYMLPNKVMSWSEAWEVYYEQNGGALFKDLERYGIRPPKYQDVANYGKHHISHQLWGTFYQYSQATNFHTWIPGKEEMDWMSEKYPETFDKYYRPRYEHWAKEHAEGRRFYNNTLPQLCQVCQVPTLFTEMGEPTKLSHRQMNYEGERYHFCSEACCDIFKHEPEKYVQAWLPVHQIYQGNCEGGDVETVVQKYYHINIGEDNFEYVGSPDHKRWLSIKG 696
            GFRLLSLV+MM +YMLPNKVMSW EAWEVYYEQ+GGALFKDLERYGIRPPKYQDVAN  K HISHQLW TFYQY QATNFHTW+P KEE+DW++EKYP++F+KYYRPR+EHW +   + +R+YN TLPQLCQVCQVP LFTE  +P+ +SHR   Y+ +RYHFCSEACC+IF +EPEKYVQAWLPVHQIYQGNC G ++  V+  YYHIN+GEDN E+ GSPD KRW  +KG
Sbjct:  268 GFRLLSLVSMMMDYMLPNKVMSWKEAWEVYYEQSGGALFKDLERYGIRPPKYQDVANAAKEHISHQLWSTFYQYGQATNFHTWMPKKEELDWLAEKYPDSFNKYYRPRFEHWDELQKKNQRYYNPTLPQLCQVCQVPVLFTETDDPSSISHRDTVYKEDRYHFCSEACCEIFGNEPEKYVQAWLPVHQIYQGNCGGPELPGVLSDYYHINLGEDNLEFSGSPDEKRWNEMKG 499          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig97910.22546.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0P7Z4V5_9GAMM2.050e-16291.38Phenol 2-monooxygenase P3 subunit n=31 Tax=Bacteri... [more]
Q84AQ2_PSEST1.970e-15586.70Phenol hydroxylase component PheN n=24 Tax=Gammapr... [more]
A0A1I5ZTM7_9GAMM4.010e-14880.60Phenol hydroxylase P3 protein n=10 Tax=Pseudomonad... [more]
A0A4P6WCX8_9GAMM3.880e-14681.03Toluene-4-monooxygenase system, hydroxylase compon... [more]
A0A7V7GVR0_9PSED1.140e-14579.83YHS domain-containing protein n=7 Tax=root TaxID=1... [more]
A0A2N1Z5Q9_9GAMM2.970e-14077.25Phenol 2-monooxygenase n=1 Tax=Gammaproteobacteria... [more]
A0A4P8YT71_PSEOL2.820e-13976.19DmpN n=20 Tax=Gammaproteobacteria TaxID=1236 RepID... [more]
DMPN_PSEUF2.610e-13272.22Phenol 2-monooxygenase, oxygenase component DmpN n... [more]
A0A2P6JIY3_9PSED1.810e-13175.33Phenol 2-monooxygenase n=1 Tax=Pseudomonas sp. MYb... [more]
K6YKD3_9ALTE9.390e-13173.28Phenol hydroxylase P3 protein n=1 Tax=Paraglacieco... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig97910contigM-pyrifera_M_contig97910:2..703 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score485.7
Seed ortholog evalue1.1e-134
Seed eggNOG ortholog443152.MDG893_16717
Preferred namedmpN
KEGG rclassRC00046,RC00490
KEGG koko:K16242
KEGG ReactionR03560,R03608,R10042,R10043
KEGG Pathwayko00361,ko00362,ko00623,ko01100,ko01120,ko01220,map00361,map00362,map00623,map01100,map01120,map01220
KEGG ModuleM00548
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Methane/Phenol/Toluene Hydroxylase
EggNOG OGs1MWWK@1224,1RMN1@1236,4669A@72275,COG3350@1,COG3350@2
COG Functional cat.S
Best tax levelAlteromonadaceae
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons1
Model size702
Cds size675
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816896.284056-UTR-M-pyrifera_M_contig97910:1..281622816896.284056-UTR-M-pyrifera_M_contig97910:1..28Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig97910 2..28 +
1692278242.338206-UTR-M-pyrifera_M_contig97910:1..281692278242.338206-UTR-M-pyrifera_M_contig97910:1..28Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig97910 2..28 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816896.298203-CDS-M-pyrifera_M_contig97910:28..7031622816896.298203-CDS-M-pyrifera_M_contig97910:28..703Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig97910 29..703 +
1692278242.3550816-CDS-M-pyrifera_M_contig97910:28..7031692278242.3550816-CDS-M-pyrifera_M_contig97910:28..703Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig97910 29..703 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig97910.22546.1prot_M-pyrifera_M_contig97910.22546.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig97910 29..703 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig97910.22546.1

>prot_M-pyrifera_M_contig97910.22546.1 ID=prot_M-pyrifera_M_contig97910.22546.1|Name=mRNA_M-pyrifera_M_contig97910.22546.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=225bp
MMKEYMLPNKVMSWSEAWEVYYEQNGGALFKDLERYGIRPPKYQDVANYG
KHHISHQLWGTFYQYSQATNFHTWIPGKEEMDWMSEKYPETFDKYYRPRY
EHWAKEHAEGRRFYNNTLPQLCQVCQVPTLFTEMGEPTKLSHRQMNYEGE
RYHFCSEACCDIFKHEPEKYVQAWLPVHQIYQGNCEGGDVETVVQKYYHI
NIGEDNFEYVGSPDHKRWLSIKGKS
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mRNA from alignment at M-pyrifera_M_contig97910:2..703+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig97910.22546.1 ID=mRNA_M-pyrifera_M_contig97910.22546.1|Name=mRNA_M-pyrifera_M_contig97910.22546.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=702bp|location=Sequence derived from alignment at M-pyrifera_M_contig97910:2..703+ (Macrocystis pyrifera P11B4 male)
GGTTTCCGCCTGCTGAGCCTGGTCAACATGATGAAGGAATACATGCTGCC GAACAAGGTCATGTCCTGGTCGGAAGCCTGGGAAGTGTATTACGAGCAAA ACGGCGGCGCCCTGTTCAAAGACCTTGAGCGCTACGGCATCCGCCCGCCC AAATATCAGGATGTGGCCAACTATGGCAAGCACCACATCAGCCATCAGCT ATGGGGCACGTTCTACCAGTACAGTCAGGCCACCAACTTCCATACCTGGA TTCCCGGCAAGGAAGAAATGGACTGGATGTCCGAGAAGTACCCGGAGACT TTCGACAAGTACTACCGCCCGCGCTACGAGCATTGGGCCAAAGAGCATGC TGAAGGCCGCCGCTTCTACAACAACACCCTGCCGCAACTGTGCCAGGTAT GCCAGGTGCCGACGCTGTTTACCGAGATGGGCGAGCCCACCAAGCTCAGC CACCGCCAGATGAACTACGAAGGTGAGCGTTACCACTTCTGCTCGGAAGC CTGCTGCGACATCTTCAAGCACGAGCCGGAGAAGTACGTTCAGGCGTGGT TGCCGGTACACCAGATCTACCAGGGCAACTGTGAAGGCGGCGACGTCGAG ACGGTGGTTCAGAAGTACTACCACATCAATATTGGCGAGGACAATTTCGA GTATGTCGGCTCGCCGGACCACAAACGCTGGTTGTCCATCAAGGGCAAGT CG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig97910:2..703+

>mRNA_M-pyrifera_M_contig97910.22546.1 ID=mRNA_M-pyrifera_M_contig97910.22546.1|Name=mRNA_M-pyrifera_M_contig97910.22546.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1350bp|location=Sequence derived from alignment at M-pyrifera_M_contig97910:2..703+ (Macrocystis pyrifera P11B4 male)
ATGATGAAGGAATACATGCTGCCGAACAAGGTCATGTCCTGGTCGGAAGC
CTGGGAAGTGTATTACGAGCAAAACGGCGGCGCCCTGTTCAAAGACCTTG
AGCGCTACGGCATCCGCCCGCCCAAATATCAGGATGTGGCCAACTATGGC
AAGCACCACATCAGCCATCAGCTATGGGGCACGTTCTACCAGTACAGTCA
GGCCACCAACTTCCATACCTGGATTCCCGGCAAGGAAGAAATGGACTGGA
TGTCCGAGAAGTACCCGGAGACTTTCGACAAGTACTACCGCCCGCGCTAC
GAGCATTGGGCCAAAGAGCATGCTGAAGGCCGCCGCTTCTACAACAACAC
CCTGCCGCAACTGTGCCAGGTATGCCAGGTGCCGACGCTGTTTACCGAGA
TGGGCGAGCCCACCAAGCTCAGCCACCGCCAGATGAACTACGAAGGTGAG
CGTTACCACTTCTGCTCGGAAGCCTGCTGCGACATCTTCAAGCACGAGCC
GGAGAAGTACGTTCAGGCGTGGTTGCCGGTACACCAGATCTACCAGGGCA
ACTGTGAAGGCGGCGACGTCGAGACGGTGGTTCAGAAGTACTACCACATC
AATATTGGCGAGGACAATTTCGAGTATGTCGGCTCGCCGGACCACAAACG
CTGGTTGTCCATCAAGGGCAAGTCGATGATGAAGGAATACATGCTGCCGA
ACAAGGTCATGTCCTGGTCGGAAGCCTGGGAAGTGTATTACGAGCAAAAC
GGCGGCGCCCTGTTCAAAGACCTTGAGCGCTACGGCATCCGCCCGCCCAA
ATATCAGGATGTGGCCAACTATGGCAAGCACCACATCAGCCATCAGCTAT
GGGGCACGTTCTACCAGTACAGTCAGGCCACCAACTTCCATACCTGGATT
CCCGGCAAGGAAGAAATGGACTGGATGTCCGAGAAGTACCCGGAGACTTT
CGACAAGTACTACCGCCCGCGCTACGAGCATTGGGCCAAAGAGCATGCTG
AAGGCCGCCGCTTCTACAACAACACCCTGCCGCAACTGTGCCAGGTATGC
CAGGTGCCGACGCTGTTTACCGAGATGGGCGAGCCCACCAAGCTCAGCCA
CCGCCAGATGAACTACGAAGGTGAGCGTTACCACTTCTGCTCGGAAGCCT
GCTGCGACATCTTCAAGCACGAGCCGGAGAAGTACGTTCAGGCGTGGTTG
CCGGTACACCAGATCTACCAGGGCAACTGTGAAGGCGGCGACGTCGAGAC
GGTGGTTCAGAAGTACTACCACATCAATATTGGCGAGGACAATTTCGAGT
ATGTCGGCTCGCCGGACCACAAACGCTGGTTGTCCATCAAGGGCAAGTCG
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