prot_M-pyrifera_M_contig97822.22527.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig97822.22527.1
Unique Nameprot_M-pyrifera_M_contig97822.22527.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length204
Homology
BLAST of mRNA_M-pyrifera_M_contig97822.22527.1 vs. uniprot
Match: UPI001E2DEEA3 (methyl-accepting chemotaxis protein n=1 Tax=Stieleria sp. JC731 TaxID=2894195 RepID=UPI001E2DEEA3)

HSP 1 Score: 120 bits (301), Expect = 1.900e-28
Identity = 87/228 (38.16%), Postives = 132/228 (57.89%), Query Frame = 0
Query:    1 MLNQKPVRKVLQAGIGDD--VDFTETRQLLVNTLNTLVGGGQHEFGEIVPAKDEVLVEAIEEQRSMVMSEFEIADQYLLAM-NENPGASSQLRARLIAQAQLTHEAAEDVVVALSNQAAVDRQTGLRNAIAMGFAIILISVGWSYLCARSVSRQVSRSANRLQ---------------------------SSGAAEQVSGNAQSLATAVEQFETSIRDVASNALSAAN 198
            MLNQ+  R+VL A  G++   DF  T + ++ +   L+ GG HEFG+I  A DE L+  ++ Q   +  + E+A+Q+L ++ N  P A S L+ RL+AQ Q  H A   VV+ L   A+ DR + +  A  +   +++ISVGWS +C RSV+RQV ++A+ ++                           +S AAEQVSGNA++LA+AVEQFE SI+++A N  SAA+
Sbjct:   54 MLNQRFTREVLLAADGEEKFADFESTLKTMLESAELLMTGGPHEFGDIHAASDEALLGLLKVQVEAIARQGELANQFLDSVYNGLPDAES-LKRRLVAQTQENHGACHRVVLKLDELASEDRASSVVIAWMVSLFVMVISVGWSLVCGRSVTRQVGKAAHEMRRLSEERLSTVSRKLLDQADKTSVEANGASTAAEQVSGNARALASAVEQFEQSIKEIAVNGSSAAS 280          
BLAST of mRNA_M-pyrifera_M_contig97822.22527.1 vs. uniprot
Match: A0A255QTA6_9BACT (Methyl-accepting transducer domain-containing protein n=1 Tax=Rhodopirellula sp. MGV TaxID=2023130 RepID=A0A255QTA6_9BACT)

HSP 1 Score: 95.1 bits (235), Expect = 2.190e-19
Identity = 73/198 (36.87%), Postives = 118/198 (59.60%), Query Frame = 0
Query:    1 MLNQKPVRKVLQAGIGDDVDFTETRQLLVNTLNTLVGGGQHEFGEIVPAKDEVLVEAIEEQRSMVMSEFEIADQYLLAMN-ENPGASSQLRARLIAQAQLTHEAAEDVVVALSNQAAVDRQTGLRNAIAMGFAIILISVGW---SYLCARSVSRQVSRSANRLQSSG-AAEQVSGNAQSLATAVEQFETSIRDVASNA 193
            MLNQ+  R++L+   GD  +   T +L++ +L+ L  GG+HEFGEI PA DE + EA++  ++    + ++AD++L A+   +      LRA LIAQ Q  H+AA  VV+A+ + A+   Q   +    M    ILI++G    S  C+R     +++++  + S+G  A+ VS +A+SL +AVEQFE SI+ +A NA
Sbjct:   55 MLNQRHTRELLEIAEGDKANPEATYELMMESLSLLRFGGEHEFGEIHPA-DESVAEALDLSQTAFEHKKKLADEFLSALQIADKERVQNLRAMLIAQTQDAHQAAHAVVMAIGDDASYLAQ---QQFYRMMLGAILITIGCFAVSMYCSRKAVTVLAKASESIGSTGDVAQNVSTSAESLRSAVEQFEASIQXIARNA 248          
BLAST of mRNA_M-pyrifera_M_contig97822.22527.1 vs. uniprot
Match: A0A5B9MPQ8_9BACT (Methyl-accepting chemotaxis protein McpS n=1 Tax=Stieleria maiorica TaxID=2795974 RepID=A0A5B9MPQ8_9BACT)

HSP 1 Score: 53.5 bits (127), Expect = 6.590e-5
Identity = 46/122 (37.70%), Postives = 68/122 (55.74%), Query Frame = 0
Query:  112 SNQAAVDRQTGLRNAIAM-GFAIILISV-GWSYLCARSVSRQVSRSANRLQ---------------------------SSGAAEQVSGNAQSLATAVEQFETSIRDVASNALSAANVAHDAV 204
            S++AAVD     R A++  G A+IL+++ G+    AR   + + RSA  L+                           +SGAAE+VS NA +LATAVEQFE SI+++A+ A +AA+VA +AV
Sbjct:  184 SDEAAVDALVDARMALSWAGAAVILLAIAGFGSYVARETIQPLRRSATNLRYLSTHDLTDVSRRLRCDAENTSVQATMASGAAEEVSANAHALATAVEQFEESIKEIAATAANAASVARNAV 305          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig97822.22527.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
UPI001E2DEEA31.900e-2838.16methyl-accepting chemotaxis protein n=1 Tax=Stiele... [more]
A0A255QTA6_9BACT2.190e-1936.87Methyl-accepting transducer domain-containing prot... [more]
A0A5B9MPQ8_9BACT6.590e-537.70Methyl-accepting chemotaxis protein McpS n=1 Tax=S... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 94..114
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..125
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 126..143
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 144..204
NoneNo IPR availableTMHMMTMhelixcoord: 126..148

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig97822contigM-pyrifera_M_contig97822:14..706 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig97822.22527.1mRNA_M-pyrifera_M_contig97822.22527.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig97822 2..706 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig97822.22527.1 ID=prot_M-pyrifera_M_contig97822.22527.1|Name=mRNA_M-pyrifera_M_contig97822.22527.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=204bp
MLNQKPVRKVLQAGIGDDVDFTETRQLLVNTLNTLVGGGQHEFGEIVPAK
DEVLVEAIEEQRSMVMSEFEIADQYLLAMNENPGASSQLRARLIAQAQLT
HEAAEDVVVALSNQAAVDRQTGLRNAIAMGFAIILISVGWSYLCARSVSR
QVSRSANRLQSSGAAEQVSGNAQSLATAVEQFETSIRDVASNALSAANVA
HDAV
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