prot_M-pyrifera_M_contig97811.22521.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig97811.22521.1
Unique Nameprot_M-pyrifera_M_contig97811.22521.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length234
Homology
BLAST of mRNA_M-pyrifera_M_contig97811.22521.1 vs. uniprot
Match: A0A3D3RGA0_9PLAN (DNA helicase n=2 Tax=Gimesia TaxID=1649453 RepID=A0A3D3RGA0_9PLAN)

HSP 1 Score: 434 bits (1117), Expect = 1.910e-148
Identity = 216/234 (92.31%), Postives = 229/234 (97.86%), Query Frame = 0
Query:    1 AKTFVRRVRETLPELARIPVVRHVVFPRAAFDVLHGIEFNTWEIWDIGKCLSGIENNCFCDDLVNVLKSGIKHSTYLKPLDYPVSQKDLKKLEQFLRPTFKSTSVDKVNQELRQLKMNKLLLDQQKPVLNLFENQKRLILNGPAGTGKSLIAMEIARRMRDRKLRTGLLCFNRHMGDNLSKQMSDDGPLIIAGTIHAKLAEMLDITIPSNATSEFWDSEFLDLAENKLINDDVK 234
            AKTFVRRVRE LPELARIPVVRHVVFPRAAFDVLHGIEFN WEIWDIGKCLSGIENNCFCDDLVNVLKSGIKHSTYLKPLD+PVSQ+DLKKLEQF+RPTFKSTSVDKV+QELRQLKMN+LL DQQKPVL+LFE Q+RLILNGPAGTGKSLIA+EIARRMRD+KLRTGLLCFNRHMG+NL KQMSDDGPLIIAGTIHAKLAEML+ITIPSNATSEFWDSEFLD+AENKLIND+VK
Sbjct:   98 AKTFVRRVREALPELARIPVVRHVVFPRAAFDVLHGIEFNAWEIWDIGKCLSGIENNCFCDDLVNVLKSGIKHSTYLKPLDHPVSQRDLKKLEQFMRPTFKSTSVDKVHQELRQLKMNQLLHDQQKPVLSLFEKQERLILNGPAGTGKSLIAVEIARRMRDQKLRTGLLCFNRHMGNNLEKQMSDDGPLIIAGTIHAKLAEMLEITIPSNATSEFWDSEFLDIAENKLINDEVK 331          
BLAST of mRNA_M-pyrifera_M_contig97811.22521.1 vs. uniprot
Match: A0A399WWN0_9BACT (Helicase ATP-binding domain-containing protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A399WWN0_9BACT)

HSP 1 Score: 132 bits (333), Expect = 3.410e-32
Identity = 82/238 (34.45%), Postives = 127/238 (53.36%), Query Frame = 0
Query:    3 TFVRRVRETLPELARIPVVRHVVFPRAAFDVLHGIEFNTWEIWD---IGKCLSGIENNCFCDDLVNVLKSGIKHSTYLKPLDYPVSQKDLKKLEQFLRPTFKSTSVDKVNQELRQLKMNKLLLDQQKPVLNLFENQKRLILNGPAGTGKSLIAMEIARRMRDRKLRTGLLCFNRHMGDNLSKQMSD---DGPLIIAGTIHAKLAEMLDITIPSNATSEFWDSEFLDLAENKLINDDVK 234
            T  RR+ E  P+   IP+V   +FPR+ F+V   I   TWE+ D     +  SG++   FC DL   +   I    +L+ L+  +SQ  ++ L +   P  K     +   E R+  + KLLL+QQ+PVL L     R+I++G AGTGK+LIAME+ARR  +   R GLLC+N+ +G  + ++M       P ++ G     +AEM  + +P   + +FW+SE  D  E  + N + K
Sbjct:   98 TLYRRLTEIAPQFKSIPIVHFCIFPRSQFEVGRNISVQTWEVMDRRAFQRFKSGLD---FCSDLKLRMGQAIDADGHLRHLENRLSQHQIESLIKLCVPVQKVRPDAREEIERREEAIEKLLLEQQRPVLQLAAQNDRIIVSGGAGTGKTLIAMEVARRAAETGKRVGLLCYNQLVGKWVKEKMDKLIPPAPNLVVGRAIRVMAEMAAVEVPEKPSKDFWESELPDRLEEIITNPEFK 332          
BLAST of mRNA_M-pyrifera_M_contig97811.22521.1 vs. uniprot
Match: A0A521RCA3_9GAMM (DUF2075 domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A521RCA3_9GAMM)

HSP 1 Score: 131 bits (330), Expect = 9.190e-32
Identity = 80/235 (34.04%), Postives = 122/235 (51.91%), Query Frame = 0
Query:    3 TFVRRVRETLPELARIPVVRHVVFPRAAFDVLHGIEFNTWEIWDIGKCLSGIENNCFCDDLVNVLKSGIKHSTYLKPLDYPVSQKDLKKLEQFLRPTFKSTSVDKVNQELRQLKMNKLLLDQQKPVLNLFENQKRLILNGPAGTGKSLIAMEIARRMRDRKLRTGLLCFNRHMGDNLSKQMSDDGPLI---IAGTIHAKLAEMLDITIPSNATSEFWDSEFLDLAENKLINDDVK 234
            TF RR  E  P+  R+PVV   +FPR+ FD+   +    WE+ D+    S      FC +L   +   +     L  LD+ +S   +  + +   P  K     +     R+ ++ K+L  QQKPVL L     RL+++G AGTGK+LIA+E+ARR  +   R  LLCFN+ +GD L +++    P +   +AG     +AE+  I+IP+  T EFWD+E     E +L + D K
Sbjct:   98 TFYRRFSELAPQFKRVPVVHCCIFPRSPFDLSPNLSVQPWELMDLRTFRSLESGTAFCAELRARIDRSVAADGQLSRLDHRLSPSQIDTVVRSCVPVQKRHPGAREEIRRREEEIEKVLRQQQKPVLQLATWNDRLVVSGGAGTGKTLIAIEVARRAAENGRRVALLCFNQLIGDWLRRRIEQSVPALPNLVAGRAIRVMAELTQISIPTKPTQEFWDTELPQQLEERLTDPDFK 332          
BLAST of mRNA_M-pyrifera_M_contig97811.22521.1 vs. uniprot
Match: A0A6B3SUC4_9BURK (ATP-binding domain-containing protein n=2 Tax=Noviherbaspirillum galbum TaxID=2709383 RepID=A0A6B3SUC4_9BURK)

HSP 1 Score: 125 bits (314), Expect = 1.500e-29
Identity = 80/233 (34.33%), Postives = 121/233 (51.93%), Query Frame = 0
Query:    3 TFVRRVRETLPELARIPVVRHVVFPRAAFDVLHGIEFNTWEIWDIGKCLSGIENNCFCDDLVNVLKSGIKHSTYLKPLDYPVSQKDLKKLEQFLRPTFKSTSVDKVNQELRQLKMNKLLLDQQKPVLNLFENQKRLILNGPAGTGKSLIAMEIARRMRDRKLRTGLLCFNRHMGDNLSKQMSDDGPL---IIAGTIHAKLAEMLDITIPSNATSEFWDSEFLDLAENKLINDD 232
            TF RR+   LP+   +PVV   VFP A F +   +    WE+ D  +  S      FC DL   ++  I+    L PL   +S  +  ++ +   P  K     +   + R+L++ ++L +QQKPVL L    +RL+++G AGTGK+LIA+E+ARR      R  LLCFNR  GD +   ++ + P    ++AG     +AEM  I +P N    +WD E   L E+KL + D
Sbjct:   98 TFYRRLVALLPQFQNLPVVHGCVFPNARFTLPPNLSAQPWELIDGVRFRSYSSGMEFCADLKQRMQRSIEADQNLLPLKVRLSGSEKDRIVEACIPVHKRQPGAREEIQQRELEIGRILREQQKPVLRLASLNQRLVVDGAAGTGKTLIAVEVARRAALAGKRVALLCFNRLAGDWIRAAVTQNAPAMPNLVAGRAIRVMAEMAGIRVPENPHQRYWDEELPLLIEDKLTDPD 330          
BLAST of mRNA_M-pyrifera_M_contig97811.22521.1 vs. uniprot
Match: A0A0W8FSP7_9ZZZZ (Nerd domain-containing family protein n=1 Tax=hydrocarbon metagenome TaxID=938273 RepID=A0A0W8FSP7_9ZZZZ)

HSP 1 Score: 118 bits (296), Expect = 4.530e-27
Identity = 74/234 (31.62%), Postives = 118/234 (50.43%), Query Frame = 0
Query:    3 TFVRRVRETLPELARIPVVRHVVFPRAAFDVLHGIEFNTWEIWDIGKCLSGIENNCFCDDLVNVLKSGIKHSTYLKPLDYPVSQKDLKKLEQFLRPTFKSTSVDKVNQELRQLKMNKLLLDQQKPVLNLFENQKRLILNGPAGTGKSLIAMEIARRMRDRKLRTGLLCFNRHMGDNLSKQMSDDGPLI---IAGTIHAKLAEMLDITIPSNATSEFWDSEFLDLAENKLINDDV 233
            TF RR+R+  P+   +PVV   +FP A+F +   +    WE+ D     +  +++ FC D+   +   I     L  L  P+S+  ++ +  +  P  K     +    LR+  + ++L DQQKPVL L     R+I++G AGTGK+LI+ME+ARR  +   R  LLCFNR +G  + +QM    P +   I G     +AE+  + IP      +W  E     E KL + ++
Sbjct:   98 TFYRRLRDIAPQFRNVPVVHMCIFPNASFHLHVNMSVQQWELMDNRVFRTFKDSSDFCQDIKLRIAESINADGKLNHLRNPLSESQVQSIVNYCLPVQKYHPNAREEIMLREQAIERILRDQQKPVLKLAFANDRIIVSGGAGTGKTLISMELARRKAESGQRVALLCFNRLIGQWMKEQMGRITPTLPNLIVGRSIQVMAELTGLDIPETPDGNYWSKELPMKLEEKLTDPEI 331          
BLAST of mRNA_M-pyrifera_M_contig97811.22521.1 vs. uniprot
Match: UPI001F24AD6C (NERD domain-containing protein n=1 Tax=Pseudomonas aeruginosa TaxID=287 RepID=UPI001F24AD6C)

HSP 1 Score: 117 bits (294), Expect = 8.300e-27
Identity = 67/212 (31.60%), Postives = 113/212 (53.30%), Query Frame = 0
Query:    6 RRVRETLPELARIPVVRHVVFPRAAFDVLHGIEFNTWEIWDIGKCLSGIENNCFCDDLVNVLKSGIKHSTYLKPLDYPVSQKDLKKLEQFLRPTFKSTSVDKVNQELRQLKMNKLLLDQQKPVLNLFENQKRLILNGPAGTGKSLIAMEIARRMRDRKLRTGLLCFNRHMGDNLSKQMSDD-GPLIIAGTIHAKLAEMLDITIPSNATSEFW 216
            RR+ + L   +R+PVV   +FPRA F V   +    +E+ D G+      ++  CD L ++    I     + PL  P++ + ++    F  P       +      R+ ++ KLL +QQ+PVL L E+  ++++ G AGTGKSLI +E+ARR   + LR G LCFNR +G   + Q+  D  PL++ G+  + L  +  +++P +   +FW
Sbjct:   98 RRLVDRLASFSRVPVVHCCIFPRADFPVPSNLSVQPYEVMDRGRFEGCATSDALCDALKSMALRIIDADPTITPLKAPLTVQQVEDFVSFCFPIRTRRPENSAEIRYREEELEKLLCEQQRPVLRLTEHNSQVLVEGGAGTGKSLIGLEVARRKAAQGLRVGYLCFNRLIGQWATNQLEGDRNPLLVGGSALSLLMSLTGVSVPDDPDDDFW 309          
BLAST of mRNA_M-pyrifera_M_contig97811.22521.1 vs. uniprot
Match: UPI000F57FC01 (NERD domain-containing protein n=1 Tax=Pseudomonas chlororaphis TaxID=587753 RepID=UPI000F57FC01)

HSP 1 Score: 117 bits (293), Expect = 1.140e-26
Identity = 76/221 (34.39%), Postives = 112/221 (50.68%), Query Frame = 0
Query:    6 RRVRETLPELARIPVVRHVVFPRAAFDVLHGIEFNTWEIWDIGKCLSGIENNCFCDDLVNVLKSGIKHSTYLKPLDYPVSQKDLKKLEQFLRPTFKSTSVDKVNQELRQLKMNKLLLDQQKPVLNLFENQKRLILNGPAGTGKSLIAMEIARRMRDRKLRTGLLCFNRHMGD-NLSKQMSDDGPLIIAGTIHAKLAEMLDITIPSNATSEFWDSEFLDLAE 225
            RR+ E L   +++PVV   +FPRA F V   +    +E+ D G+  + I  +  C+ L N+    I     + PL  PVS    ++   F  P              R+ ++ KLL +QQ PVL L E   R+++ G AGTGKSLI +E+ARR   + LR G LCFNR +G    SK   D  PL++ G+  + L  +  I +P N   +FW    LD+ +
Sbjct:  100 RRLVERLATFSQVPVVHCCIFPRADFAVPPNLSVQPYEVMDRGRFQACITGDVLCNALKNMALRIIDADPMITPLKVPVSGLQGEEFVNFCFPIRTRRPEKDAEIRYREEELEKLLREQQHPVLLLAEYNSRVLVEGGAGTGKSLIGLEVARRKAAQGLRVGYLCFNRLIGQWAASKLEGDQNPLLVGGSALSVLMSLTGIKVPDNPGDDFWSLLPLDIQD 320          
BLAST of mRNA_M-pyrifera_M_contig97811.22521.1 vs. uniprot
Match: A0A6N0ZJT2_9PROT (NERD domain-containing protein n=1 Tax=Candidatus Accumulibacter sp. TaxID=2053492 RepID=A0A6N0ZJT2_9PROT)

HSP 1 Score: 116 bits (290), Expect = 2.960e-26
Identity = 79/236 (33.47%), Postives = 128/236 (54.24%), Query Frame = 0
Query:    4 FVRRVRETLPELARIPVVRHVVFPRAAFDVLHGIEFNTWEIWDIGKCLSGIENNCFCDDLVNVLKSGIKHSTYLKPLDYPVSQKDLKKLEQFLRPT--FKSTSVDKVNQELRQLKMNKLLLDQQKPVLNLFENQKRLILNGPAGTGKSLIAMEIARRMRDRKLRTGLLCFNRHMGDNLSKQMSDDGPLI---IAGTIHAKLAEMLDITIPSNATSEFWDSEFLDLAENKLINDDVK 234
            F RR+ E +     IPVV   VFPRA FD+   +    WE+ D     S  +   F + LV  +++ I     +KPL   +S + + ++     P   F+  + +++++  R+ ++++LL +QQKPVL L +   RL++ G AGTGK+LIAME+ARR      R  LLCFN+ +GD + +Q+    P +   IAG     +A +  I IP    +++W+ EF    E  L +DD++
Sbjct:   99 FRRRLIELVEGFKAIPVVHMCVFPRARFDLQPNLSVQPWELIDERLFRSVSDAGAFSEALVGRVRAAIAADKQIKPLRNRLSAEAVDRIVASCVPIRRFRPDASEEISR--REQEVDRLLREQQKPVLQLADMNSRLVVTGAAGTGKTLIAMELARRKALAGKRVALLCFNQLIGDWIVQQVESIEPRLPNLIAGRAIKVMANLAGIPIPEAPDADYWEVEFPAQFEASLADDDLR 332          
BLAST of mRNA_M-pyrifera_M_contig97811.22521.1 vs. uniprot
Match: A0A833PJ49_ACIBZ (ATP-dependent RecD-like DNA helicase n=1 Tax=Acinetobacter bereziniae TaxID=106648 RepID=A0A833PJ49_ACIBZ)

HSP 1 Score: 115 bits (288), Expect = 5.370e-26
Identity = 69/226 (30.53%), Postives = 119/226 (52.65%), Query Frame = 0
Query:    6 RRVRETLPELARIPVVRHVVFPRAAFDVLHGIEFNTWEIWDIGKCLSGIENNCFCDDLVNVLKSGIKHSTYLKPLDYPVSQKDLKKLEQFLRPTFKSTSVDKVNQELRQLKMNKLLLDQQKPVLNLFENQKRLILNGPAGTGKSLIAMEIARRMRDRKLRTGLLCFNRHMGDNLSKQMSDD-GPLIIAGTIHAKLAEMLDITIPSNATSEFWDSEFLDLAENKLIN 230
            RRV++ LP    +P+V   +FP A F V   +    +EI D  +     E N FCD++  + +  I +   L   ++ ++ + + K   F  P  K         E+++ ++  +L +QQ PVL L     ++++ G AGTGKSLI +EIAR    + +R G +CFNR +G  +  ++  D  PL+I G+IH+ L  ++D+    +   +FWD   L + ++KL +
Sbjct:  100 RRVQKILPNFENVPIVHCCIFPNALFSVPLNLSIQPFEIMDRAQFDRADEPNKFCDEIKRITQLMISNDPNLPKRNFNLTAQQINKFIDFCFPIRKRRPELLEELEIKERELKNVLREQQLPVLRLVNYNSKVLIGGGAGTGKSLIGLEIARSKAAKGIRVGYVCFNRLIGKWIEYKIGQDQNPLLIGGSIHSLLFALVDVPKDQHINKQFWDELPL-IVQDKLTD 324          
BLAST of mRNA_M-pyrifera_M_contig97811.22521.1 vs. uniprot
Match: UPI00117AF544 (NERD domain-containing protein n=3 Tax=Pseudomonas TaxID=286 RepID=UPI00117AF544)

HSP 1 Score: 115 bits (288), Expect = 5.530e-26
Identity = 72/214 (33.64%), Postives = 114/214 (53.27%), Query Frame = 0
Query:    6 RRVRETLPELARIPVVRHVVFPRAAFDVLHGIEFNTWEIWDIGKCLSGIENNCFCDDLVNVLKSGIKHSTYLKPLDYPVSQKDLKKLEQFLRPTFKSTSVDKVNQEL--RQLKMNKLLLDQQKPVLNLFENQKRLILNGPAGTGKSLIAMEIARRMRDRKLRTGLLCFNRHMGDNLSKQMS-DDGPLIIAGTIHAKLAEMLDITIPSNATSEFW 216
            RR+ + L   +++PVV   +FPRA F V   +    +E+ D G+  +       CD L  ++   I     + PL  P+S   +     F  P    T   + N E+  R+ ++ +LL +QQ+PVL+L E   R+++ G AGTGKSLI +E+ARR   + LR G LCFNR +G   + Q+  D  PL++ G+  + L  +  I++P N   +FW
Sbjct:  100 RRLLDRLASFSQVPVVHCCIFPRADFAVAPNLSIQPYEVMDRGRFEACATGEALCDGLKTMVLRIIDADPTITPLKAPLSVPQVTDFVNFCFPI--RTRRPEKNAEICYREEELKQLLREQQRPVLHLTEYNPRVLVEGGAGTGKSLIGIEVARRKAAQGLRVGYLCFNRLIGQWAASQLECDHHPLLVGGSALSVLMSLTGISVPDNPDDDFW 311          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig97811.22521.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3D3RGA0_9PLAN1.910e-14892.31DNA helicase n=2 Tax=Gimesia TaxID=1649453 RepID=A... [more]
A0A399WWN0_9BACT3.410e-3234.45Helicase ATP-binding domain-containing protein n=1... [more]
A0A521RCA3_9GAMM9.190e-3234.04DUF2075 domain-containing protein n=1 Tax=Gammapro... [more]
A0A6B3SUC4_9BURK1.500e-2934.33ATP-binding domain-containing protein n=2 Tax=Novi... [more]
A0A0W8FSP7_9ZZZZ4.530e-2731.62Nerd domain-containing family protein n=1 Tax=hydr... [more]
UPI001F24AD6C8.300e-2731.60NERD domain-containing protein n=1 Tax=Pseudomonas... [more]
UPI000F57FC011.140e-2634.39NERD domain-containing protein n=1 Tax=Pseudomonas... [more]
A0A6N0ZJT2_9PROT2.960e-2633.47NERD domain-containing protein n=1 Tax=Candidatus ... [more]
A0A833PJ49_ACIBZ5.370e-2630.53ATP-dependent RecD-like DNA helicase n=1 Tax=Acine... [more]
UPI00117AF5445.530e-2633.64NERD domain-containing protein n=3 Tax=Pseudomonas... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 105..125
NoneNo IPR availableGENE3D3.40.50.300coord: 85..231
e-value: 8.1E-10
score: 40.2
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 60..206

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig97811contigM-pyrifera_M_contig97811:3..704 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig97811.22521.1mRNA_M-pyrifera_M_contig97811.22521.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig97811 3..704 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig97811.22521.1 ID=prot_M-pyrifera_M_contig97811.22521.1|Name=mRNA_M-pyrifera_M_contig97811.22521.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=234bp
AKTFVRRVRETLPELARIPVVRHVVFPRAAFDVLHGIEFNTWEIWDIGKC
LSGIENNCFCDDLVNVLKSGIKHSTYLKPLDYPVSQKDLKKLEQFLRPTF
KSTSVDKVNQELRQLKMNKLLLDQQKPVLNLFENQKRLILNGPAGTGKSL
IAMEIARRMRDRKLRTGLLCFNRHMGDNLSKQMSDDGPLIIAGTIHAKLA
EMLDITIPSNATSEFWDSEFLDLAENKLINDDVK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase