mRNA_M-pyrifera_M_contig97731.22510.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig97731.22510.1 vs. uniprot
Match: A0A7S0JLT4_CAFRO (Hypothetical protein n=4 Tax=Sar TaxID=2698737 RepID=A0A7S0JLT4_CAFRO) HSP 1 Score: 127 bits (319), Expect = 3.030e-30 Identity = 86/221 (38.91%), Postives = 120/221 (54.30%), Query Frame = 1
Query: 4 SLLMHEFSSDYLPKASSLVSYFQSFAKVRGLNLRTRS------------KVVALRRSEG------------KVVVKVM-----GEDGAEEELVAKVVVLAVGLSGRAGIPFYDPDDL-----SVPYDELEKGSVEAFEGKRVLVLGRGNSAMEVASAAMQVASQVHVAGSERGRIRLAWETHYPGDVRATHAQLLESYMLKSLDGVLEVPMQHLSLSKVQH 564
S L+ EFS++ P ++ Y SFA RG + +VV L R+EG + +++ GE G+ ++A+ VV+A GLS P + L + P D + A+ G+RVLV+GRGN+A EVASAAMQ A+ VH+ G +R R+RL+WETHYPGDVR HAQLLE+Y+LKS DG+LE L +S+ H
Sbjct: 161 SHLVREFSTELYPPSAVASEYMASFASRRGWGRESPPSPAASQRAFFGWRVVRLARAEGSDCPALAQQLGARFALQMQHAAHRGEAGSSVVMLARFVVVATGLSKEVVAPVHGNLSLLDTYVTAPVDPM------AYSGQRVLVIGRGNAAFEVASAAMQSAASVHIMGRQRSRVRLSWETHYPGDVRMIHAQLLETYLLKSGDGMLEGDAAMLEISQGAH 375
BLAST of mRNA_M-pyrifera_M_contig97731.22510.1 vs. uniprot
Match: UPI00065BC2B9 (FAD-dependent oxidoreductase domain-containing protein 2 n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI00065BC2B9) HSP 1 Score: 113 bits (282), Expect = 2.190e-25 Identity = 72/218 (33.03%), Postives = 115/218 (52.75%), Query Frame = 1
Query: 1 PSLLMHEFSSDYLPKASSLVSYFQSFAKVRGLNLRTRSKVVALRR------SEGKVVVKVMGEDGAEEELVAKVVVLAVGLSGRAGIPFYDPDDLSVPYDELEKGSVEAFEGKRVLVLGRGNSAMEVASAAMQVASQVHVAGSERGRIRLAWETHYPGDVRATHAQLLESYMLKSLDGVLEVPMQHLSLSKVQHHNHSQILVTDRQCDSLDRCPLRKP 636
P LL+ ++S + P A +L+ Y + + G+ ++ +KV + +G V +D ++ V + +++A G++ IP +L+ Y+ + E +EGK VL+LGRGNSA EVA+ + +H+ R R+RLAW THY GD+RA + +LL++Y LKSLDG+LE + H+ L K H D D D LR+P
Sbjct: 99 PDLLVTKYSKEMFPHADALLRYLKDYQTKLGIKVQFNTKVHNIHSVPNATAPDGHVY---RLQDQTDQVYVCRTLIMATGMA-TPNIPPMKGIELAEGYETMSLDP-EDYEGKTVLILGRGNSAFEVANGIYGATNLIHMVA--RSRVRLAWATHYVGDLRAVNNELLDTYQLKSLDGLLESSLSHMVLVKRDDKIHFTYKANDFTPDRFDNIALREP 309
BLAST of mRNA_M-pyrifera_M_contig97731.22510.1 vs. uniprot
Match: A0A7I8WDM8_9ANNE (DgyrCDS14385 n=1 Tax=Dimorphilus gyrociliatus TaxID=2664684 RepID=A0A7I8WDM8_9ANNE) HSP 1 Score: 110 bits (276), Expect = 3.680e-25 Identity = 62/184 (33.70%), Postives = 105/184 (57.07%), Query Frame = 1
Query: 4 SLLMHEFSSDYLPKASSLVSYFQSFAKVRGLNLRTRSKVVALRRSEGKVVVKVMGEDGAEEELVAKVVVLAVGLSGRAGIPFYDPDDLSVPYDELEKGSVEAFEGKRVLVLGRGNSAMEVASAAMQVASQVHVAGSERGRIRLAWETHYPGDVRATHAQLLESYMLKSLDGVLEVPMQHLSLSK 555
+LL E+S D+ P + Y F K GLN R + +++ R+ + + D E + K +++A G+ +PF + ++ YD++ +EGK VL+LG+GN+A EVA++ A+ VH+ R R++L+W THY GD+RA + +L++Y LK+LDG+ EV ++ LS+ K
Sbjct: 97 ALLFKEYSKDFFPDKGDYLQYLSDFEKKLGLNTRFNTNIISSRKIDNGTIELT---DEKEVTFLCKYLIVATGIFKPLKVPFNGSEYVTF-YDDMILDP-HYYEGKNVLILGKGNTANEVATSLFPYANVVHM--GSRSRVKLSWSTHYVGDLRAINNNILDNYQLKALDGIFEVDVRELSIFK 273
BLAST of mRNA_M-pyrifera_M_contig97731.22510.1 vs. uniprot
Match: A0A7I8WDD8_9ANNE (DgyrCDS14384 n=1 Tax=Dimorphilus gyrociliatus TaxID=2664684 RepID=A0A7I8WDD8_9ANNE) HSP 1 Score: 110 bits (276), Expect = 8.700e-25 Identity = 62/184 (33.70%), Postives = 105/184 (57.07%), Query Frame = 1
Query: 4 SLLMHEFSSDYLPKASSLVSYFQSFAKVRGLNLRTRSKVVALRRSEGKVVVKVMGEDGAEEELVAKVVVLAVGLSGRAGIPFYDPDDLSVPYDELEKGSVEAFEGKRVLVLGRGNSAMEVASAAMQVASQVHVAGSERGRIRLAWETHYPGDVRATHAQLLESYMLKSLDGVLEVPMQHLSLSK 555
+LL E+S D+ P + Y F K GLN R + +++ R+ + + D E + K +++A G+ +PF + ++ YD++ +EGK VL+LG+GN+A EVA++ A+ VH+ R R++L+W THY GD+RA + +L++Y LK+LDG+ EV ++ LS+ K
Sbjct: 102 ALLFKEYSKDFFPDKGDYLQYLSDFEKKLGLNTRFNTNIISSRKIDNGTIELT---DEKEVTFLCKYLIVATGIFKPLKVPFNGSEYVTF-YDDMILDP-HYYEGKNVLILGKGNTANEVATSLFPYANVVHM--GSRSRVKLSWSTHYVGDLRAINNNILDNYQLKALDGIFEVDVRELSIFK 278
BLAST of mRNA_M-pyrifera_M_contig97731.22510.1 vs. uniprot
Match: UPI00148A58FA (FAD-dependent oxidoreductase domain-containing protein 2 n=1 Tax=Crassostrea gigas TaxID=29159 RepID=UPI00148A58FA) HSP 1 Score: 111 bits (277), Expect = 1.040e-24 Identity = 71/212 (33.49%), Postives = 112/212 (52.83%), Query Frame = 1
Query: 4 SLLMHEFSSDYLPKASSLVSYFQSFAKVRGLNLRTRSKVVALRRSEGKVVVKVMGEDGAEEELVAKVVVLAVGLSGRAGIPFYDPDDLSVPYDELEKGSVEAFEGKRVLVLGRGNSAMEVASAAMQVASQVHVAGSERGRIRLAWETHYPGDVRATHAQLLESYMLKSLDGVLEVPMQHLSLSKVQHHNHSQILVTDRQ-CDSLDRCPLRKP 636
SLLM +S + P A LV Y + + G+ ++ +++ + R E + + +DG ++ +V+A G++ D + + Y+++ E FEG+ VL+LGRGN+A E A A + VH+ G R R+RL+W THY GD+RA + LL++Y LKSLDGVLE ++ + + K H Q + SLD LR P
Sbjct: 110 SLLMRHYSKELFPHADVLVKYLNDYKEKLGIKVQYNTEIRNIERKENQFTM----DDGNGQKYTCSKLVVATGIATPNVPQNVDGMEHVIGYEDVSINP-EDFEGQSVLILGRGNAAFETADAIYGNTNVVHMVG--RSRVRLSWSTHYVGDLRAVNNGLLDTYQLKSLDGVLEAGLEEVKIVKQNGKLHLQFKEDEEDPVFSLDNFALRDP 314
BLAST of mRNA_M-pyrifera_M_contig97731.22510.1 vs. uniprot
Match: UPI0018A7A0B9 (FAD-dependent oxidoreductase domain-containing protein 2-like isoform X1 n=3 Tax=Penaeus TaxID=133894 RepID=UPI0018A7A0B9) HSP 1 Score: 111 bits (277), Expect = 1.150e-24 Identity = 70/191 (36.65%), Postives = 102/191 (53.40%), Query Frame = 1
Query: 7 LLMHEFSSDYLPKASSLVSYFQSFAKVRGLNLRTRSKVVALRRSEGKVVVKVMGEDG--------AEEELVAKVVVLAVGLSGRAGIPFYDPDDLSVPYDELEKGSVEAFEGKRVLVLGRGNSAMEVASAAMQVASQVHVAGSERGRIRLAWETHYPGDVRATHAQLLESYMLKSLDGVLEVPMQHLSLSK 555
LL FS D+ P+A ++V Y +FA L++R + + +RR G G G +E V + VV A GL G P + +L Y+++ FEGK VL+LGRGN+A E A A + VH+ R R RL+W THY GD+RA + LL++Y LKSLDG+LE ++ ++L +
Sbjct: 120 LLFRHFSQDFFPEADTMVQYLNAFASRSELHIRYNTAIWDVRRQAG-----TRGSPGWVFSMRDQHNQEFVCRYVVAATGL-GVPNSPSFPGSELVEGYEDVSTDP-RVFEGKNVLILGRGNAAFETADAIYGSTNMVHMVS--RSRARLSWNTHYVGDLRAINNGLLDTYQLKSLDGLLEAGVEDMALER 301
BLAST of mRNA_M-pyrifera_M_contig97731.22510.1 vs. uniprot
Match: UPI0006B0D83B (LOW QUALITY PROTEIN: FAD-dependent oxidoreductase domain-containing protein 2-like n=1 Tax=Limulus polyphemus TaxID=6850 RepID=UPI0006B0D83B) HSP 1 Score: 110 bits (276), Expect = 1.410e-24 Identity = 64/187 (34.22%), Postives = 103/187 (55.08%), Query Frame = 1
Query: 7 LLMHEFSSDYLPKASSLVSYFQSFAKVRGLNLRTRS---KVVALRRSEGKVVVKVMGEDGAEEELVAKVVVLAVGLSGRAGIPFYDPDDLSVPYDELEKGSVEAFEGKRVLVLGRGNSAMEVASAAMQVASQVHVAGSERGRIRLAWETHYPGDVRATHAQLLESYMLKSLDGVLEVPMQHLSLSKV 558
LL+ +S D+ P A ++ Y + GL ++ + K+ + + + ED + + + + V++A GL + P ++ + + Y+ + E FEGK VL+LGRGNSA E A A + +H+ R R RL+W THY GD+RA + LL++Y LKSLDG++EVP+Q L L K+
Sbjct: 107 LLVKHYSKDFYPHADIMLKYLDDYRIKLGLKVQFNTDIRKIEQILNITAETMFSFFLEDQHQRQYICRTVIVAAGL-WKPHAPTFEGSEHVIGYESISVNPTE-FEGKTVLILGRGNSAFETADAIYGRTNMIHMIS--RSRARLSWNTHYVGDLRAINNALLDNYQLKSLDGLIEVPVQQLKLRKI 289
BLAST of mRNA_M-pyrifera_M_contig97731.22510.1 vs. uniprot
Match: A0A7I8W1K6_9ANNE (DgyrCDS10222 n=2 Tax=Dimorphilus gyrociliatus TaxID=2664684 RepID=A0A7I8W1K6_9ANNE) HSP 1 Score: 110 bits (275), Expect = 1.870e-24 Identity = 64/184 (34.78%), Postives = 104/184 (56.52%), Query Frame = 1
Query: 4 SLLMHEFSSDYLPKASSLVSYFQSFAKVRGLNLRTRSKVVALRRSEGKVVVKVMGEDGAEEELVAKVVVLAVGLSGRAGIPFYDPDDLSVPYDELEKGSVEAFEGKRVLVLGRGNSAMEVASAAMQVASQVHVAGSERGRIRLAWETHYPGDVRATHAQLLESYMLKSLDGVLEVPMQHLSLSK 555
+L+ E+S D+ P + Y F K GLN R + +++ R+ + + D E + K +++A G+ IPF + L+ YD++ +EGK VL+LG+GN+A EVA++ + VH+ R R++L+W THY GD+RA + LL++Y LKSLDG+ EV +Q L++ K
Sbjct: 102 TLVFKEYSKDFFPHKDDYLRYLIDFEKKLGLNTRFNTNIISSRKIDNGTIELT---DEKEVTFLCKYLIIATGIFKPLKIPFNGSEYLTF-YDDMILDP-HYYEGKNVLILGKGNTANEVATSLFPYTNVVHM--GSRSRVKLSWSTHYVGDLRAINNNLLDNYQLKSLDGIFEVDVQDLAIFK 278
BLAST of mRNA_M-pyrifera_M_contig97731.22510.1 vs. uniprot
Match: A0A7M7SYA8_STRPU (Uncharacterized protein n=1 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7SYA8_STRPU) HSP 1 Score: 110 bits (275), Expect = 1.960e-24 Identity = 68/189 (35.98%), Postives = 106/189 (56.08%), Query Frame = 1
Query: 4 SLLMHEFSSDYLPKASSLVSYFQSFAKVRGLNLRTRSKVVALRRSEGKVVVKVMGE-----DGAEEELVAKVVVLAVGLSGRAGIPFYDPDDLSVPYDELEKGSVEAFEGKRVLVLGRGNSAMEVASAAMQVASQVHVAGSERGRIRLAWETHYPGDVRATHAQLLESYMLKSLDGVLEVPMQHLSLSK 555
SLLM +S ++ P A + V Y + GLN++ +++ + R E + G+ D +V+V++ G+ + IP + + + Y+++ + FEGK VL+LGRGNSA E A + + +HV G R R+++AWETHY GD+RA + LL++Y LKSLDG+LE M LSL K
Sbjct: 107 SLLMKHYSKEFFPDADTYVKYLNDYTTKLGLNVQYNTEISDIARHEPP---NLSGQYFTMQDQHGNGYQCRVMVISTGMH-KPNIPTFQGQEYTEGYEDMSLDR-DDFEGKSVLILGRGNSAFETADHIIGSTNVIHVMG--RSRVKMAWETHYVGDLRAINNGLLDTYQLKSLDGLLEADMVELSLVK 288
BLAST of mRNA_M-pyrifera_M_contig97731.22510.1 vs. uniprot
Match: K1R4K8_CRAGI (FAD-dependent oxidoreductase domain-containing protein 2 n=3 Tax=Crassostrea gigas TaxID=29159 RepID=K1R4K8_CRAGI) HSP 1 Score: 110 bits (274), Expect = 2.510e-24 Identity = 69/211 (32.70%), Postives = 112/211 (53.08%), Query Frame = 1
Query: 7 LLMHEFSSDYLPKASSLVSYFQSFAKVRGLNLRTRSKVVALRRSEGKVVVKVMGEDGAEEELVAKVVVLAVGLSGRAGIPFYDPDDLSVPYDELEKGSVEAFEGKRVLVLGRGNSAMEVASAAMQVASQVHVAGSERGRIRLAWETHYPGDVRATHAQLLESYMLKSLDGVLEVPMQHLSLSKVQHHNH-SQILVTDRQCDSLDRCPLRKP 636
+L +FS P A +V+Y S+A+ L +R +++ + G K+ +D + +V ++A G+ + IP +L Y++L + + +EGK V++LGRGNSA E A+A + VH+ G R R+R AWETHY GD+RA + +LL++Y LKSLDG+LE + + + H + + Q + D PL P
Sbjct: 102 MLFKQFSRQMFPPADVMVTYLDSYARHFNLTIRYNTEISDIHSLHGNASTKIGMKDQNGNNYLCRVTIVATGI-WKPRIPDIPGHELMDGYEDLSMNASD-YEGKSVMILGRGNSAFETATAIYDKTNFVHMVG--RHRLRFAWETHYVGDLRAVNNELLDTYQLKSLDGLLEYDINDYKVVRQGGHLYLRENPPPGSQWEEYDNDPLLTP 308 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig97731.22510.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig97731.22510.1 >prot_M-pyrifera_M_contig97731.22510.1 ID=prot_M-pyrifera_M_contig97731.22510.1|Name=mRNA_M-pyrifera_M_contig97731.22510.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=208bp MHEFSSDYLPKASSLVSYFQSFAKVRGLNLRTRSKVVALRRSEGKVVVKVback to top mRNA from alignment at M-pyrifera_M_contig97731:70..705+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig97731.22510.1 ID=mRNA_M-pyrifera_M_contig97731.22510.1|Name=mRNA_M-pyrifera_M_contig97731.22510.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=636bp|location=Sequence derived from alignment at M-pyrifera_M_contig97731:70..705+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig97731:70..705+ >mRNA_M-pyrifera_M_contig97731.22510.1 ID=mRNA_M-pyrifera_M_contig97731.22510.1|Name=mRNA_M-pyrifera_M_contig97731.22510.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1248bp|location=Sequence derived from alignment at M-pyrifera_M_contig97731:70..705+ (Macrocystis pyrifera P11B4 male)back to top |