mRNA_M-pyrifera_M_contig95965.22127.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig95965.22127.1
Unique NamemRNA_M-pyrifera_M_contig95965.22127.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig95965.22127.1 vs. uniprot
Match: A0A3D3RG54_9PLAN (Helicase C-terminal domain-containing protein n=2 Tax=Gimesia TaxID=1649453 RepID=A0A3D3RG54_9PLAN)

HSP 1 Score: 424 bits (1091), Expect = 2.100e-137
Identity = 202/241 (83.82%), Postives = 222/241 (92.12%), Query Frame = 1
Query:    1 FSLVLWIGRESVPNKNSHALDAIREYRNDPKKLNNPLVVNECPWCRSQLGKAEIKRPVRRWKEQEWKYEVLKGISEVNQIPVIHCSDPDCAFSDQLPILVIDEQIYDTPPSLIIGTADKFAVIAYRPRARAIFGRSDNGEVIKRPPFLIIQDETHLIAGPLGTLFGLYEGAIEKLCTLKNNNGVNSKPKIICSTATIRGAKEQLLSIFARNSFTLFPSPGLDISDSFFGRYAKEKDSEQLM 723
            FSL LWIG + VPNKN  A++ IREY+N+PKKLNNPLVV ECPWCRSQLGKAEIKRP + W+EQ+WK+EVLKGI E NQ P++HCSD +C FSD+LPILVIDEQIY+ PPSLIIGTADKFAVIAYRP+ARAIFGRSDNG++I+RPP LIIQDETHLIAGPLGTLFGLYE AIEKLCTL NNNGV+SKPKIICSTATIRGAKEQLLSIFARNSFTLFPSPGLDISDSFFGRYAKE DSE+LM
Sbjct:  640 FSLGLWIGTDGVPNKNLQAINEIREYKNEPKKLNNPLVVTECPWCRSQLGKAEIKRPAKGWREQDWKHEVLKGICEENQEPILHCSDTECVFSDRLPILVIDEQIYNRPPSLIIGTADKFAVIAYRPKARAIFGRSDNGDIIRRPPCLIIQDETHLIAGPLGTLFGLYESAIEKLCTLNNNNGVDSKPKIICSTATIRGAKEQLLSIFARNSFTLFPSPGLDISDSFFGRYAKENDSEKLM 880          
BLAST of mRNA_M-pyrifera_M_contig95965.22127.1 vs. uniprot
Match: A0A6B3SP11_9BURK (Helicase C-terminal domain-containing protein n=1 Tax=Noviherbaspirillum galbum TaxID=2709383 RepID=A0A6B3SP11_9BURK)

HSP 1 Score: 238 bits (606), Expect = 2.170e-68
Identity = 127/244 (52.05%), Postives = 171/244 (70.08%), Query Frame = 1
Query:    1 FSLVLWIGRESVPNKNSHALDAIREYRNDPKKLNNPLVVNECPWCRSQLGKAEIKRPVRRWKEQEWKYEVLKGISEVNQI-PVIHCSDPDCAFSDQ-----LPILVIDEQIYDTPPSLIIGTADKFAVIAYRPRARAIFGRSDNG---EVIKRPPFLIIQDETHLIAGPLGTLFGLYEGAIEKLCTLKNNNGVNSKPKIICSTATIRGAKEQLLSIFARNSFTLFPSPGLDISDSFFGRYAKEK 705
            FSL LWIG +  PNK S A   + +Y+ D  +  NPLV+ ECPWCR+ +G+ +  RP    KE EW  + L+GI EV++  P++ CSDP C F  +     LP+ VIDE+IY  PPSLII TADKFA++AYRP A AIFGR+ +G   E ++ PP LI+QDE HLI+GPLGT+  LYEG  E+LC++   +G+  +PK+I STATIRGA EQ+ +++ R   +LFPSPGL + DSFFGRYA+++
Sbjct:  630 FSLGLWIGGDGSPNKISEAKSQLGQYKKDQLE-GNPLVLIECPWCRAAIGRYDGIRPAG-IKETEWNAKRLRGIGEVSEEGPLLLCSDPLCEFGGERHESWLPVEVIDERIYRHPPSLIIATADKFAMVAYRPAAGAIFGRTVDGNCPEQVRMPPGLIVQDELHLISGPLGTMCALYEGIFERLCSIPGKDGL-IRPKLIASTATIRGADEQVKALYDRRQTSLFPSPGLLMGDSFFGRYARQQ 870          
BLAST of mRNA_M-pyrifera_M_contig95965.22127.1 vs. uniprot
Match: A0A6N0ZIG8_9PROT (Helicase C-terminal domain-containing protein n=1 Tax=Candidatus Accumulibacter sp. TaxID=2053492 RepID=A0A6N0ZIG8_9PROT)

HSP 1 Score: 236 bits (602), Expect = 7.320e-68
Identity = 124/246 (50.41%), Postives = 169/246 (68.70%), Query Frame = 1
Query:    1 FSLVLWIGRESVPNKNSHALDAIREYRNDPKKLNNPLVVNECPWCRSQLGKAEIKRPVRRWKEQEWKYEVLKGISEVNQIPVIHCSDPDCAF--SDQ---LPILVIDEQIYDTPPSLIIGTADKFAVIAYRPRARAIFG-RSDNGEVIKR--PPFLIIQDETHLIAGPLGTLFGLYEGAIEKLCTLKNNNGVNSKPKIICSTATIRGAKEQLLSIFARNSFTLFPSPGLDISDSFFGRYAKEKDSE 714
            FS+ LWIG E  PN N  A  AIR YR + +   NP+V+ ECPWCR+++G+ +   P R  +   W+   ++GIS+    P +HC+DP C F  +D+   LP+ VIDE+IY  PPSL+I TADKFA+IAYRP+A A+FG R DN  V     PP LIIQDE HLI+GPLGT++ LYEG +E+LC++ +  G+  +PK+I STATIRGA+ Q+ +++ R    LFPSPGL + DSFFG YA+ +D +
Sbjct:  622 FSVGLWIGSEGSPNSNVEARTAIRRYREEAES-GNPMVLTECPWCRAEIGRLDGSAP-RGLRAAAWRDLRVRGISDTQLGPRLHCTDPACDFGTADERKWLPVEVIDERIYANPPSLVIATADKFAMIAYRPKAGALFGNRVDNDGVAAERIPPGLIIQDELHLISGPLGTMYALYEGIVERLCSVNSRTGM-IRPKLIASTATIRGAESQVNALYDRRETRLFPSPGLTMGDSFFGTYARHEDGK 864          
BLAST of mRNA_M-pyrifera_M_contig95965.22127.1 vs. uniprot
Match: A0A2D8RCH8_9GAMM (Helicase C-terminal domain-containing protein n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A2D8RCH8_9GAMM)

HSP 1 Score: 236 bits (602), Expect = 7.750e-68
Identity = 124/248 (50.00%), Postives = 170/248 (68.55%), Query Frame = 1
Query:    1 FSLVLWIGRESVPNKNSHALDAIREYRNDPKKLNNPLVVNECPWCRSQLG-KAEIKRPVRRWKEQEWKYEVLKGISEV--NQIPVIHCSDPDCAFSDQ---LPILVIDEQIYDTPPSLIIGTADKFAVIAYRPRARAIFGRSDNGE----VIKRPPFLIIQDETHLIAGPLGTLFGLYEGAIEKLCTLKNNNGVNSKPKIICSTATIRGAKEQLLSIFARNSFTLFPSPGLDISDSFFGRYAKEKDSE 714
            FSL LWIG +  PNK   A   +++Y     +  NPLV+ ECPWCRS++G  AE  RP R+   + W      G  +    +  V+ CSD +C F  +   +P+ VIDE+IY +PP+L+IGTADKFA++AYRP+A ++FGR  + E    + +RPP LI+QDE HLI+GPLGTL+GLYE AIE+LCT++ N G   KPKII STATIRGA++Q+ S++ R+   LFPSPGL +SDSFFGRY ++ + +
Sbjct:  631 FSLGLWIGSDGAPNKVDDAHSRVQKYFRANGEHGNPLVLTECPWCRSEIGFLAEDPRP-RKKGSKPWNRVGHAGFGQDARGKQVVLKCSDDECEFGGEFGSIPVEVIDERIYASPPTLVIGTADKFAMLAYRPQAGSLFGRDQSREGPVGLARRPPGLILQDEFHLISGPLGTLYGLYETAIEELCTVETNAGQRIKPKIIASTATIRGAEQQVSSVYGRDQLQLFPSPGLKMSDSFFGRYQRKPNGK 877          
BLAST of mRNA_M-pyrifera_M_contig95965.22127.1 vs. uniprot
Match: A0A5E7WEE7_PSEFL (Helicase C-terminal domain-containing protein n=3 Tax=Pseudomonas TaxID=286 RepID=A0A5E7WEE7_PSEFL)

HSP 1 Score: 236 bits (602), Expect = 7.790e-68
Identity = 126/243 (51.85%), Postives = 163/243 (67.08%), Query Frame = 1
Query:    1 FSLVLWIGRESVPNKNSHALDAIREYRNDPKKLNNPLVVNECPWCRSQLGKAEIKRPVRRWKEQEWKYEVLKGISEVNQIPVIHCSDPDCAFS---DQLPILVIDEQIYDTPPSLIIGTADKFAVIAYRPRARAIFG--RSDNGEV--IKRPPFLIIQDETHLIAGPLGTLFGLYEGAIEKLCTLKNNNGVNSKPKIICSTATIRGAKEQLLSIFARNSFTLFPSPGLDISDSFFGRYAKEKD 708
            FSL LWIG +  PN    A   IR+Y     +  NPLV+ ECPWCRS +G+    RP R  +  E     L G++E N+ P + CSD  C++    D LP+ V+D+ IYDTPPS+ IGTADKFA++A++P A A+FG      G V  I +PP LIIQDE HLI+GPLGT++GLYEG IE+ C+ ++  G+  +PKII STATIRGA EQ+ +++AR    LFPSPGL + DSFFGRYAKE D
Sbjct:  638 FSLGLWIGGDGSPNTWDDARVEIRKYSRGEVE-GNPLVLTECPWCRSAIGRLASDRPARYARRNE---NNLAGLAESNKRPYLKCSDTRCSYGGEHDSLPVEVVDQSIYDTPPSMFIGTADKFAMMAWKPEAGALFGFHHGAAGTVTRISQPPGLIIQDEFHLISGPLGTIYGLYEGVIERFCSAEDRTGM-IRPKIIASTATIRGATEQVRAVYAREGLQLFPSPGLQMGDSFFGRYAKEGD 875          
BLAST of mRNA_M-pyrifera_M_contig95965.22127.1 vs. uniprot
Match: A0A1I4DBV7_9HYPH (Helicase conserved C-terminal domain-containing protein n=1 Tax=Methylocapsa palsarum TaxID=1612308 RepID=A0A1I4DBV7_9HYPH)

HSP 1 Score: 233 bits (593), Expect = 1.280e-67
Identity = 117/247 (47.37%), Postives = 166/247 (67.21%), Query Frame = 1
Query:    1 FSLVLWIGRESVPNKNSHALDAIREYRNDPKKLNNPLVVNECPWCRSQLGKAEIKRPVRRWKEQEWKYEVLKGISEVN-QIPVIHCSDPDCAFSDQ-----LPILVIDEQIYDTPPSLIIGTADKFAVIAYRPRARAIFGRSD-----NGEVIKRPPFLIIQDETHLIAGPLGTLFGLYEGAIEKLCTLKNNNGVNSKPKIICSTATIRGAKEQLLSIFARNSFTLFPSPGLDISDSFFGRYAKEKD 708
            FSL LW+G +  PNK   A  A+  ++   +K  NPL++ ECPWCR+++G+ E   P++    + W    +KGI+E   + P++HC D  C F        LP+ VIDE+IY++PPSL+I TADKFA+  YRP+A A+FGR +       E +  PP LI+QDE HLI+GPLGT++ LYEG  E+LC++ ++ G    PKII STATIRGA +Q+ S++AR+   LFPSPGL + DSFFG+YAK+++
Sbjct:  264 FSLGLWVGGDGSPNKIKDARSALAAFKRGDEK-GNPLILTECPWCRAEIGRCEDSAPIK-MDAKIWSKLRVKGITESGTEGPLLHCPDTACEFGKANYQSWLPVEVIDERIYESPPSLVIATADKFAMATYRPKAGALFGRRELRGTGTVEQVSYPPSLIVQDELHLISGPLGTMYALYEGIFERLCSVPSDGGTLIVPKIISSTATIRGAADQINSLYARSQLQLFPSPGLTMGDSFFGKYAKDQN 508          
BLAST of mRNA_M-pyrifera_M_contig95965.22127.1 vs. uniprot
Match: A0A399WXB8_9BACT (Helicase C-terminal domain-containing protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A399WXB8_9BACT)

HSP 1 Score: 234 bits (598), Expect = 2.670e-67
Identity = 125/244 (51.23%), Postives = 168/244 (68.85%), Query Frame = 1
Query:    1 FSLVLWIGRESVPNKNSHALDAIREYRNDPKKLNNPLVVNECPWCRSQLGKAEIKRPVRRWKEQEWKYEVLKGISEV-NQIPVIHCSDPDCAFSDQ-----LPILVIDEQIYDTPPSLIIGTADKFAVIAYRPRARAIFGRSDNGEVIKR---PPFLIIQDETHLIAGPLGTLFGLYEGAIEKLCTLKNNNGVNSKPKIICSTATIRGAKEQLLSIFARNSFTLFPSPGLDISDSFFGRYAKEK 705
            FSL LWIG +  PNK   A  A+ E+R       NPLV+ ECPWCR+++G+ E  RP     + +W     +G++E+  Q P++ C D  C F  +     LPI VIDE+IYD PPSL+IGTADKFA+IAYRP+A AIFGR   G  + +   PP +I+QDE HLI+GPLGT++GLYEG IE+LC+  +++G   +PK+I STATIRGA +Q+L+++AR    LFP+PGL + DSFFGRYAK +
Sbjct:  627 FSLGLWIGGDGSPNKVDEAKTALNEFRRG-HSAGNPLVLTECPWCRAEIGRYEGGRP-NVIPQAQWNAARTRGVAEIAGQGPLLVCPDAACHFGQENPESWLPIEVIDERIYDRPPSLVIGTADKFAMIAYRPQAGAIFGRKVIGGGVGQIFVPPGMIVQDELHLISGPLGTIYGLYEGIIERLCSY-HDSGQLVRPKLIASTATIRGAADQVLALYARPETNLFPAPGLVMGDSFFGRYAKNR 867          
BLAST of mRNA_M-pyrifera_M_contig95965.22127.1 vs. uniprot
Match: B3EJE3_CHLPB (Helicase domain protein n=1 Tax=Chlorobium phaeobacteroides (strain BS1) TaxID=331678 RepID=B3EJE3_CHLPB)

HSP 1 Score: 231 bits (590), Expect = 3.240e-66
Identity = 123/247 (49.80%), Postives = 171/247 (69.23%), Query Frame = 1
Query:    1 FSLVLWIGRESVPNKNSHALDAIREYRNDPK-KLNNPLVVNECPWCRSQLGKAEIKRPVRRWKEQEWKYEVLKGI-SEVNQIPVIHCSDPDCAFSDQ-----LPILVIDEQIYDTPPSLIIGTADKFAVIAYRPRARAIFGRSDNGEVIKR---PPFLIIQDETHLIAGPLGTLFGLYEGAIEKLCTLKNNNGVNSKPKIICSTATIRGAKEQLLSIFARNSFTLFPSPGLDISDSFFGRYAKEKDS 711
            FS+ LW+G+++ PNK S A + + E+R        NP V+ ECPWCRS++G+   + P R  K++      +KGI S  ++ P + C D  C F        LPI VID++IY T PSL+IGTADKFA+IAY+P A A+FGRS    V+++   PP +IIQDE HLI+GPLGT++ +YE   EKLCT+ + NGV+ KPKII STATIRGAK+Q+ ++FAR+S +LFPSPG  + DSFFG YA+++++
Sbjct:  622 FSIGLWVGKDATPNKISDAANKLVEFRKQRNGHTGNPFVLTECPWCRSEIGRFHNELPRRISKQER-----VKGINSSKDEGPRLLCPDSCCEFGQMAVDTWLPIEVIDQRIYQTRPSLVIGTADKFAMIAYQPDAGALFGRSREDGVVRQTYSPPGMIIQDELHLISGPLGTMYAMYESVFEKLCTV-SANGVSVKPKIISSTATIRGAKDQVKAVFARDSLSLFPSPGWTMGDSFFGTYARDENN 862          
BLAST of mRNA_M-pyrifera_M_contig95965.22127.1 vs. uniprot
Match: A0A2G9ZXJ2_9DELT (Helicase C-terminal domain-containing protein (Fragment) n=1 Tax=Desulfobacterales bacterium CG23_combo_of_CG06-09_8_20_14_all_52_9 TaxID=1973984 RepID=A0A2G9ZXJ2_9DELT)

HSP 1 Score: 228 bits (581), Expect = 4.030e-65
Identity = 125/251 (49.80%), Postives = 168/251 (66.93%), Query Frame = 1
Query:    1 FSLVLWIGRESVPNKNSHALDAIREYRNDPKKLNNPLVVNECPWCRSQLGKAEIKRP--VRRWKEQEWKYEVLKGISEV-NQIPVIHCSDPDCAFSDQ-----LPILVIDEQIYDTPPSLIIGTADKFAVIAYRPRARAIFGRSD-NGEVIKR--PPFLIIQDETHLIAGPLGTLFGLYEGAIEKLCTLKNNNGVNSKPKIICSTATIRGAKEQLLSIFARNSFTLFPSPGLDISDSFFGRYAKEKDSEQL 720
            FSL LWIG E  PN    A   +  +R    +  NPLV+ ECPWCRS++G+ E +RP  VR   + +W     +GI E  N  P++HC D +C+F  +     LPI V+DE+IY  PPSL+I TADKFA+IAYRP A A+FGR   NG++ +   PP LI+QDE HLI+GPLGT++ LYEG  E+LC+  + NG   KPK+I STATIRGA +Q+ S+++R    LFPSPGL ++DSFFG+YA++   + L
Sbjct:  636 FSLGLWIGGEGSPNTIRDARTELATFRRGENE-GNPLVLTECPWCRSEIGRYEGRRPNVVR---QNQWNSLRTRGIIEDGNNGPLLHCPDNNCSFGQEYPESWLPIEVVDERIYQHPPSLVIATADKFAIIAYRPAAGALFGRRFVNGQLYQESIPPGLIVQDELHLISGPLGTMYALYEGVFERLCSY-DRNGTLIKPKLIASTATIRGAPDQVKSLYSRARTQLFPSPGLMMADSFFGKYARDATGKLL 881          
BLAST of mRNA_M-pyrifera_M_contig95965.22127.1 vs. uniprot
Match: A0A0W8FSP4_9ZZZZ (Superfamily ii dna and rna helicase n=1 Tax=hydrocarbon metagenome TaxID=938273 RepID=A0A0W8FSP4_9ZZZZ)

HSP 1 Score: 228 bits (581), Expect = 5.470e-65
Identity = 122/249 (49.00%), Postives = 169/249 (67.87%), Query Frame = 1
Query:    1 FSLVLWIGRESVPNKNSHALDAIREYRNDPKKLNNPLVVNECPWCRSQLGKAEIKRPVRRWKEQEWKYEVLKGISEVN-QIPVIHCSDPDCAFSDQ-----LPILVIDEQIYDTPPSLIIGTADKFAVIAYRPRARAIFGRSD-NGEVIKR--PPFLIIQDETHLIAGPLGTLFGLYEGAIEKLCTLKNNNGVNSKPKIICSTATIRGAKEQLLSIFARNSFTLFPSPGLDISDSFFGRYAKEKDSEQL 720
            FSL LWIG  + PN    A   + ++R    +  NPL++ ECPWCR+++G+ +   P R  ++ +W     +GIS+VN + P++HC+D  CAF  +     +P+ VIDE+IY  PPSL+I TADKFA+IAYRP A AIFGR+  N E  +   PP LIIQDE HLI+GPLGT++ LYEG  E+LC+ + N     KPK+I STATIRGA +Q+ S++AR+   LFPSPGL + DSFFG+YA+++  + L
Sbjct:  629 FSLGLWIGSAASPNDVEQAKKDVGKFRQGHIQ-GNPLILTECPWCRAEIGRYKANTPPRGVRQNQWNNLRTRGISDVNAEGPLLHCTDGRCAFGLENWEHWIPVEVIDERIYKHPPSLVIATADKFAMIAYRPDAGAIFGRNTVNNEKCQTHVPPGLIIQDELHLISGPLGTMYALYEGIFERLCSYRINARW-IKPKLIASTATIRGAADQVKSLYARDQMQLFPSPGLKMGDSFFGKYARDERGKLL 875          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig95965.22127.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3D3RG54_9PLAN2.100e-13783.82Helicase C-terminal domain-containing protein n=2 ... [more]
A0A6B3SP11_9BURK2.170e-6852.05Helicase C-terminal domain-containing protein n=1 ... [more]
A0A6N0ZIG8_9PROT7.320e-6850.41Helicase C-terminal domain-containing protein n=1 ... [more]
A0A2D8RCH8_9GAMM7.750e-6850.00Helicase C-terminal domain-containing protein n=2 ... [more]
A0A5E7WEE7_PSEFL7.790e-6851.85Helicase C-terminal domain-containing protein n=3 ... [more]
A0A1I4DBV7_9HYPH1.280e-6747.37Helicase conserved C-terminal domain-containing pr... [more]
A0A399WXB8_9BACT2.670e-6751.23Helicase C-terminal domain-containing protein n=1 ... [more]
B3EJE3_CHLPB3.240e-6649.80Helicase domain protein n=1 Tax=Chlorobium phaeoba... [more]
A0A2G9ZXJ2_9DELT4.030e-6549.80Helicase C-terminal domain-containing protein (Fra... [more]
A0A0W8FSP4_9ZZZZ5.470e-6549.00Superfamily ii dna and rna helicase n=1 Tax=hydroc... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig95965contigM-pyrifera_M_contig95965:3..725 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score234.6
Seed ortholog evalue4.9e-59
Seed eggNOG ortholog331678.Cphamn1_1415
KEGG koko:K07012
Hectar predicted targeting categoryother localisation
EggNOG free text desc.DNA/RNA hybrid annealing activity
EggNOG OGsCOG1203@1,COG1203@2
COG Functional cat.L
Best tax levelBacteria
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko02048
Exons1
Model size723
Cds size723
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816874.932993-CDS-M-pyrifera_M_contig95965:2..7251622816874.932993-CDS-M-pyrifera_M_contig95965:2..725Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig95965 3..725 -
1692278229.8607163-CDS-M-pyrifera_M_contig95965:2..7251692278229.8607163-CDS-M-pyrifera_M_contig95965:2..725Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig95965 3..725 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig95965.22127.1prot_M-pyrifera_M_contig95965.22127.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig95965 3..725 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig95965.22127.1

>prot_M-pyrifera_M_contig95965.22127.1 ID=prot_M-pyrifera_M_contig95965.22127.1|Name=mRNA_M-pyrifera_M_contig95965.22127.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=241bp
FSLVLWIGRESVPNKNSHALDAIREYRNDPKKLNNPLVVNECPWCRSQLG
KAEIKRPVRRWKEQEWKYEVLKGISEVNQIPVIHCSDPDCAFSDQLPILV
IDEQIYDTPPSLIIGTADKFAVIAYRPRARAIFGRSDNGEVIKRPPFLII
QDETHLIAGPLGTLFGLYEGAIEKLCTLKNNNGVNSKPKIICSTATIRGA
KEQLLSIFARNSFTLFPSPGLDISDSFFGRYAKEKDSEQLM
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mRNA from alignment at M-pyrifera_M_contig95965:3..725-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig95965.22127.1 ID=mRNA_M-pyrifera_M_contig95965.22127.1|Name=mRNA_M-pyrifera_M_contig95965.22127.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=723bp|location=Sequence derived from alignment at M-pyrifera_M_contig95965:3..725- (Macrocystis pyrifera P11B4 male)
TTTTCTTTGGTGCTTTGGATTGGAAGGGAAAGTGTTCCAAACAAGAATTC ACATGCGCTCGATGCCATCAGAGAGTATCGAAATGATCCCAAAAAGTTAA ATAATCCTCTTGTCGTAAATGAATGTCCCTGGTGTCGTTCACAACTGGGA AAGGCAGAGATTAAACGACCTGTAAGAAGGTGGAAAGAACAGGAATGGAA GTATGAGGTATTGAAGGGGATCAGCGAAGTGAATCAAATCCCCGTTATTC ATTGTTCTGATCCTGATTGTGCTTTCTCTGATCAATTACCAATTTTGGTA ATTGACGAGCAAATATATGATACTCCACCTTCTTTAATAATTGGTACAGC GGATAAATTTGCGGTCATCGCATATCGTCCGAGAGCTAGGGCTATCTTTG GGCGGTCCGATAATGGCGAGGTAATCAAGCGTCCCCCCTTCTTAATTATT CAGGATGAAACTCATCTGATCGCCGGACCACTTGGCACATTGTTTGGTCT CTATGAGGGCGCGATCGAAAAACTCTGTACTCTGAAAAATAATAATGGAG TAAATTCGAAGCCGAAAATCATCTGTTCGACTGCGACTATTCGGGGCGCC AAAGAACAACTTTTGTCAATCTTTGCGAGAAATTCGTTTACTCTTTTTCC GTCGCCGGGATTAGATATTTCAGATTCATTTTTTGGACGTTACGCAAAAG AGAAGGATTCTGAGCAACTAATG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig95965:3..725-

>mRNA_M-pyrifera_M_contig95965.22127.1 ID=mRNA_M-pyrifera_M_contig95965.22127.1|Name=mRNA_M-pyrifera_M_contig95965.22127.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1446bp|location=Sequence derived from alignment at M-pyrifera_M_contig95965:3..725- (Macrocystis pyrifera P11B4 male)
TTTTCTTTGGTGCTTTGGATTGGAAGGGAAAGTGTTCCAAACAAGAATTC
ACATGCGCTCGATGCCATCAGAGAGTATCGAAATGATCCCAAAAAGTTAA
ATAATCCTCTTGTCGTAAATGAATGTCCCTGGTGTCGTTCACAACTGGGA
AAGGCAGAGATTAAACGACCTGTAAGAAGGTGGAAAGAACAGGAATGGAA
GTATGAGGTATTGAAGGGGATCAGCGAAGTGAATCAAATCCCCGTTATTC
ATTGTTCTGATCCTGATTGTGCTTTCTCTGATCAATTACCAATTTTGGTA
ATTGACGAGCAAATATATGATACTCCACCTTCTTTAATAATTGGTACAGC
GGATAAATTTGCGGTCATCGCATATCGTCCGAGAGCTAGGGCTATCTTTG
GGCGGTCCGATAATGGCGAGGTAATCAAGCGTCCCCCCTTCTTAATTATT
CAGGATGAAACTCATCTGATCGCCGGACCACTTGGCACATTGTTTGGTCT
CTATGAGGGCGCGATCGAAAAACTCTGTACTCTGAAAAATAATAATGGAG
TAAATTCGAAGCCGAAAATCATCTGTTCGACTGCGACTATTCGGGGCGCC
AAAGAACAACTTTTGTCAATCTTTGCGAGAAATTCGTTTACTCTTTTTCC
GTCGCCGGGATTAGATATTTCAGATTCATTTTTTGGACGTTACGCAAAAG
AGAAGGATTCTGAGCAACTAATGTTTTCTTTGGTGCTTTGGATTGGAAGG
GAAAGTGTTCCAAACAAGAATTCACATGCGCTCGATGCCATCAGAGAGTA
TCGAAATGATCCCAAAAAGTTAAATAATCCTCTTGTCGTAAATGAATGTC
CCTGGTGTCGTTCACAACTGGGAAAGGCAGAGATTAAACGACCTGTAAGA
AGGTGGAAAGAACAGGAATGGAAGTATGAGGTATTGAAGGGGATCAGCGA
AGTGAATCAAATCCCCGTTATTCATTGTTCTGATCCTGATTGTGCTTTCT
CTGATCAATTACCAATTTTGGTAATTGACGAGCAAATATATGATACTCCA
CCTTCTTTAATAATTGGTACAGCGGATAAATTTGCGGTCATCGCATATCG
TCCGAGAGCTAGGGCTATCTTTGGGCGGTCCGATAATGGCGAGGTAATCA
AGCGTCCCCCCTTCTTAATTATTCAGGATGAAACTCATCTGATCGCCGGA
CCACTTGGCACATTGTTTGGTCTCTATGAGGGCGCGATCGAAAAACTCTG
TACTCTGAAAAATAATAATGGAGTAAATTCGAAGCCGAAAATCATCTGTT
CGACTGCGACTATTCGGGGCGCCAAAGAACAACTTTTGTCAATCTTTGCG
AGAAATTCGTTTACTCTTTTTCCGTCGCCGGGATTAGATATTTCAGATTC
ATTTTTTGGACGTTACGCAAAAGAGAAGGATTCTGAGCAACTAATG
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