mRNA_M-pyrifera_M_contig110534.2208.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig110534.2208.1 vs. uniprot
Match: A0A5A8DR10_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DR10_CAFRO) HSP 1 Score: 162 bits (409), Expect = 7.870e-45 Identity = 76/150 (50.67%), Postives = 96/150 (64.00%), Query Frame = 1
Query: 1 PGHFMFMEDDFRLCPNALVAIQYLVHKISYLAEDWIMLRISYGLNGGLIRGPDVAAFRQHLLNRHRERPPDHILVEWYAQEREETKAYGKGRPFFASRYNLFEHLGAVSSLDAGGRGAFAGCYDLMDGDVLFEVEAFKVKECPHQDVWPC 450
P F MEDDFRLCP+ + Y V K++ + WI LRISYGL G ++ G D+AA +L + RPPDH+LVEW+A E E+ Y R FA R+NL +H G VSSL +G FAGCY+ +D LFEVEAFK CP++DVWPC
Sbjct: 284 PDLFFVMEDDFRLCPHFFQVLDYAVAKMARVQARWIALRISYGLAGAVVPGKDIAALADYLRRHVQRRPPDHLLVEWFAGESPESARYKMDRKHFAFRHNLLQHFGTVSSLRGAKQGRFAGCYEALDTGSLFEVEAFKPDVCPNEDVWPC 433
BLAST of mRNA_M-pyrifera_M_contig110534.2208.1 vs. uniprot
Match: A0A7S1C7T6_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C7T6_9STRA) HSP 1 Score: 156 bits (395), Expect = 3.430e-44 Identity = 76/147 (51.70%), Postives = 94/147 (63.95%), Query Frame = 1
Query: 10 FMFMEDDFRLCPNALVAIQYLVHKISYLAEDWIMLRISYGLNGGLIRGPDVAAFRQHLLNRHRERPPDHILVEWYAQEREETKAYGKGRPFFASRYNLFEHLGAVSSLDAGGRGAFAGCYDLMDGDVLFEVEAFKVKECPHQDVWPC 450
+MFMEDDFR+CP+AL ++ YLV K L +WI+LR +GLNGGLI D A + RPPDH+LVEW+A ER + KAY R A RYNLFEH+G SSL + FA CY+ + LF+VEAFK EC H D+WPC
Sbjct: 148 YMFMEDDFRMCPHALRSLVYLVEKADRLYPNWILLRTCFGLNGGLIHAEDTAFLAGYYREHQARRPPDHMLVEWFAGERPQAKAYVGNRKHIAFRYNLFEHIGFHSSLRSTKATRFAACYEELTEPTLFQVEAFK-PECQHDDIWPC 293
BLAST of mRNA_M-pyrifera_M_contig110534.2208.1 vs. uniprot
Match: A0A3P3YJU1_PLABS (Uncharacterized protein n=2 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3YJU1_PLABS) HSP 1 Score: 151 bits (381), Expect = 1.210e-41 Identity = 71/150 (47.33%), Postives = 93/150 (62.00%), Query Frame = 1
Query: 1 PGHFMFMEDDFRLCPNALVAIQYLVHKISYLAEDWIMLRISYGLNGGLIRGPDVAAFRQHLLNRHRERPPDHILVEWYAQEREETKAYGKGRPFFASRYNLFEHLGAVSSLDAGGRGAFAGCYDLMDGDVLFEVEAFKVKECPHQDVWPC 450
P +FMF+EDDF LCP+ L AI +L+ K A DWI L ++ G+NG ++ D+ F +L R RPPDH++VEW+A E E++ +Y K RP A RYNL H GA S+L G CY + D +F VE+FKV EC H DVWPC
Sbjct: 188 PSYFMFLEDDFWLCPSGLEAILHLLAKAYRYAPDWIALVMAEGMNGIFLKRKDMPIFSDYLFEHQRRRPPDHLVVEWFAGETEQSASYRKDRPHLAFRYNLLRHRGAESTLRGSIGGTENSCYHVNDDGRMFNVESFKVDECDHDDVWPC 337
BLAST of mRNA_M-pyrifera_M_contig110534.2208.1 vs. uniprot
Match: A0A7S3FZY7_9EUKA (Hypothetical protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3FZY7_9EUKA) HSP 1 Score: 149 bits (377), Expect = 1.060e-40 Identity = 66/148 (44.59%), Postives = 95/148 (64.19%), Query Frame = 1
Query: 7 HFMFMEDDFRLCPNALVAIQYLVHKISYLAEDWIMLRISYGLNGGLIRGPDVAAFRQHLLNRHRERPPDHILVEWYAQEREETKAYGKGRPFFASRYNLFEHLGAVSSLDAGGRGAFAGCYDLMDGDVLFEVEAFKVKECPHQDVWPC 450
H++FMEDDF LCPNA+ A+ YL+ K + +W+ +R SYGLNG ++R D+ +++ L+R+ RPPDH++ EW +E K+Y K R + +YNLF+HLG VSSL A ++ CYD + LF EAFK +C H D+ PC
Sbjct: 244 HYLFMEDDFELCPNAMQALLYLIGKAYRVHGNWLAIRTSYGLNGIILRDDDLDEMKEYYLSRYEARPPDHLMSEWTLKETTRAKSYLKDRTYICYKYNLFDHLGTVSSLRASSSPSYPRCYDKLGEPTLFANEAFKFNKCGHDDITPC 391
BLAST of mRNA_M-pyrifera_M_contig110534.2208.1 vs. uniprot
Match: R1DNI9_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DNI9_EMIHU) HSP 1 Score: 148 bits (373), Expect = 3.500e-39 Identity = 74/158 (46.84%), Postives = 99/158 (62.66%), Query Frame = 1
Query: 7 HFMFMEDDFRLCPNALVAIQYLVHKISYLAEDWIMLRISYGLNGGLIRG-PDVAAFRQHLLNRHRERPPDHILVEWYAQEREETKAYGKGRPFFASRYNLFEHLGAVSSLDAGGRGAFAGCYDLMDGDVLFEVEAFKVKE--------CPHQDVWPCT 453
H + MEDD+ +CP+AL+A+QYL+ K EDW+ LR+SYG NG ++RG D+ + R+HL + RPPDH+L EW++ ER +TKAY GR + R+NLF H+GA+S+L+ GCY LM D L E F K CPH DVWPCT
Sbjct: 219 HVLLMEDDWLVCPSALLALQYLIDKAYAYDEDWLALRVSYGFNGVVVRGGADLRSLRRHLESHPWRRPPDHLLFEWFSGERPDTKAYAAGRSYRVFRHNLFYHIGALSTLNQPKTRFTPGCYSLMY-DWLLPAEVFDEKASAARRRPACPHDDVWPCT 375
BLAST of mRNA_M-pyrifera_M_contig110534.2208.1 vs. uniprot
Match: A0A7S3H1Q4_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H1Q4_9STRA) HSP 1 Score: 139 bits (350), Expect = 1.770e-38 Identity = 61/148 (41.22%), Postives = 91/148 (61.49%), Query Frame = 1
Query: 7 HFMFMEDDFRLCPNALVAIQYLVHKISYLAEDWIMLRISYGLNGGLIRGPDVAAFRQHLLNRHRERPPDHILVEWYAQEREETKAYGKGRPFFASRYNLFEHLGAVSSLDAGGRGAFAGCYDLMDGDVLFEVEAFKVKECPHQDVWPC 450
+++F+EDD + C N L+A+QYL++K S +W+ +R SYG+NG + D+ F +LL RPPDH++VEWYA E E Y R +YNLF H+G VS+L + ++ CY+ + +F+VEAF ++CP DVWPC
Sbjct: 65 YYLFLEDDMQFCNNGLLAMQYLLNKASRYHPNWLAIRASYGMNGIFMHNNDLETFADYLLKHQARRPPDHLVVEWYAGETPEAGKYRGKRANIGFKYNLFNHIGVVSTLRSQKSTSYPKCYEPLLEPTVFQVEAFNPRQCPRDDVWPC 212
BLAST of mRNA_M-pyrifera_M_contig110534.2208.1 vs. uniprot
Match: A0A0H5REB6_9EUKA (Uncharacterized protein n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5REB6_9EUKA) HSP 1 Score: 140 bits (353), Expect = 1.830e-37 Identity = 62/150 (41.33%), Postives = 94/150 (62.67%), Query Frame = 1
Query: 1 PGHFMFMEDDFRLCPNALVAIQYLVHKISYLAEDWIMLRISYGLNGGLIRGPDVAAFRQHLLNRHRERPPDHILVEWYAQEREETKAYGKGRPFFASRYNLFEHLGAVSSLDAGGRGAFAGCYDLMDGDVLFEVEAFKVKECPHQDVWPC 450
P +F+F+EDDF +CP+ L AI +L+ K +WI L +S G+NG +++ D+ F ++L++ RPPDH+++EW+A E E+ AY +GRP RYNL +H GA S+L CYD+ D +F+V +FK +C H D+WPC
Sbjct: 198 PSYFVFIEDDFSVCPSGLEAILHLLKKAYRFFPNWIALAMSTGMNGIILKKQDMIPFAKYLVDHQTRRPPDHLIIEWFAGETRESAAYRQGRPHLTFRYNLMQHRGAASTLRDHPAQIVDDCYDVNDIGRMFDVMSFKAIDCGHDDIWPC 347
BLAST of mRNA_M-pyrifera_M_contig110534.2208.1 vs. uniprot
Match: A0A7S2MHH0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MHH0_9STRA) HSP 1 Score: 138 bits (347), Expect = 4.870e-37 Identity = 61/148 (41.22%), Postives = 92/148 (62.16%), Query Frame = 1
Query: 7 HFMFMEDDFRLCPNALVAIQYLVHKISYLAEDWIMLRISYGLNGGLIRGPDVAAFRQHLLNRHRERPPDHILVEWYAQEREETKAYGKGRPFFASRYNLFEHLGAVSSLDAGGRGAFAGCYDLMDGDVLFEVEAFKVKECPHQDVWPC 450
+FMF+EDD LC N + +I++L+ + + DWI +R S+G+NG +RG D+ F +L+ RPPDH++VEW+A E ++ Y + R F RYNLF+HLG S+L + CY+ + +LF +E+FK ECP D+WPC
Sbjct: 136 YFMFLEDDMTLCDNGIQSIRHLLERGEAYSSDWIAIRASFGMNGIFMRGYDLPVFADYLVEHQARRPPDHLVVEWFAGEVPQSAKYKQQRGHFGFRYNLFDHLGKKSTLRSHEAKEMPMCYETLTFPILFLIESFKPNECPMDDLWPC 283
BLAST of mRNA_M-pyrifera_M_contig110534.2208.1 vs. uniprot
Match: R1FF71_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FF71_EMIHU) HSP 1 Score: 140 bits (354), Expect = 8.790e-37 Identity = 70/165 (42.42%), Postives = 98/165 (59.39%), Query Frame = 1
Query: 7 HFMFMEDDFRLCPNALVAIQYLVHKISYLAEDWIMLRISYGLNGGLIRG-PDVAAFRQHLLNRHRERPPDHILVEWYAQEREETKAYGKGRPFFASRYNLFEHLGAVSSLDAGGRGAFAGCYDLMDGDVLFEVE---------------AFKVKECPHQDVWPCT 453
H + MEDD+ +CP+AL+A+QYL+ K EDW+ LR+SYG NG ++RG D+ + R+HL + RPPDH+L EW++ ER +TKAY GR + R+NLF H+GA+S+L+ GCY L+ + V A + CPH DVWPCT
Sbjct: 164 HVLLMEDDWLVCPSALLALQYLLDKAYAYDEDWLALRVSYGFNGVVVRGGADLRSLRRHLESHPWRRPPDHLLFEWFSGERPDTKAYAAGRSYRVFRHNLFYHIGALSTLNQPKTRFTPGCYSLIFASINSLVRNSLLRAKASSTSLFSAVSEQACPHDDVWPCT 328
BLAST of mRNA_M-pyrifera_M_contig110534.2208.1 vs. uniprot
Match: A0A7S1U3S5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U3S5_9STRA) HSP 1 Score: 140 bits (352), Expect = 1.310e-36 Identity = 61/147 (41.50%), Postives = 92/147 (62.59%), Query Frame = 1
Query: 10 FMFMEDDFRLCPNALVAIQYLVHKISYLAEDWIMLRISYGLNGGLIRGPDVAAFRQHLLNRHRERPPDHILVEWYAQEREETKAYGKGRPFFASRYNLFEHLGAVSSLDAGGRGAFAGCYDLMDGDVLFEVEAFKVKECPHQDVWPC 450
++F+EDD LCP A++Y++ K + +WI +R S+G+NG I G DV F +L RPPDH++VEW+A E+ ++ A +GR A RYN+F+HLG S+L + + C++ ++ VLFE EAF K+CP D+WPC
Sbjct: 298 YLFLEDDMELCPRGFEAVRYVLEKATAYYGEWIAVRCSFGMNGIFITGDDVPIFANYLEEHQSRRPPDHLVVEWFAGEKPQSAAQKRGRVNGAFRYNIFKHLGLWSTLRSQKSPRYPACFEELNSKVLFEAEAFSAKDCPDDDLWPC 444 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig110534.2208.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig110534.2208.1 >prot_M-pyrifera_M_contig110534.2208.1 ID=prot_M-pyrifera_M_contig110534.2208.1|Name=mRNA_M-pyrifera_M_contig110534.2208.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=147bp MFMEDDFRLCPNALVAIQYLVHKISYLAEDWIMLRISYGLNGGLIRGPDVback to top mRNA from alignment at M-pyrifera_M_contig110534:3..455+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig110534.2208.1 ID=mRNA_M-pyrifera_M_contig110534.2208.1|Name=mRNA_M-pyrifera_M_contig110534.2208.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=453bp|location=Sequence derived from alignment at M-pyrifera_M_contig110534:3..455+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig110534:3..455+ >mRNA_M-pyrifera_M_contig110534.2208.1 ID=mRNA_M-pyrifera_M_contig110534.2208.1|Name=mRNA_M-pyrifera_M_contig110534.2208.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=882bp|location=Sequence derived from alignment at M-pyrifera_M_contig110534:3..455+ (Macrocystis pyrifera P11B4 male)back to top |