mRNA_M-pyrifera_M_contig94708.21849.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig94708.21849.1 vs. uniprot
Match: A0A7S4IKL7_9EUKA (tRNA 4-demethylwyosine synthase (AdoMet-dependent) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IKL7_9EUKA) HSP 1 Score: 406 bits (1044), Expect = 1.330e-135 Identity = 190/233 (81.55%), Postives = 206/233 (88.41%), Query Frame = 1
Query: 13 KRMLSTTHVKTLQKQGYKIIGSHSGVKLCRWTKSMLRGRGGCYKHTFYGIASHLCMEMTPSMACANKCVFCWRHHKNPVTREWRWEQDEPHFIIDQAVAKHRQMIKSCKGIPGVVPERYEEAFQPRHCALSLVGEPIIYPEINAFLRYMHEQRISSFMVTNAQFPAEISSLVPVTQLYVSIDAGNEEDLRKIDRPLFVDFWQRFLDSIAALSAKGQRTVFRLTLVKDYNMDSV 711
K MLS+TH TLQKQGYKIIGSHSGVKLCRWTKSMLRGRGGCYKHTFYGIASH CMEMTPSMACANKCVFCWRHHKNPVTREWRW D II+ A+ +H++MIK+C+GIPGV+PER+EE F RHCALSLVGEPIIYPEIN FLR +H + ISSFMVTNAQFP +I LVPVTQLYVSIDA EE L+KIDRPLFVDFWQRFLDSI ALSAKGQRTVFRLTLVKD+NMD +
Sbjct: 315 KEMLSSTHKLTLQKQGYKIIGSHSGVKLCRWTKSMLRGRGGCYKHTFYGIASHRCMEMTPSMACANKCVFCWRHHKNPVTREWRWITDGAEMIIEGAIERHKKMIKTCRGIPGVIPERFEEGFNVRHCALSLVGEPIIYPEINEFLRMLHGKGISSFMVTNAQFPDKIEELVPVTQLYVSIDAPTEESLKKIDRPLFVDFWQRFLDSIRALSAKGQRTVFRLTLVKDWNMDEI 547
BLAST of mRNA_M-pyrifera_M_contig94708.21849.1 vs. uniprot
Match: A0A7S3DFP5_9EUKA (tRNA 4-demethylwyosine synthase (AdoMet-dependent) n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3DFP5_9EUKA) HSP 1 Score: 372 bits (955), Expect = 2.020e-122 Identity = 171/235 (72.77%), Postives = 198/235 (84.26%), Query Frame = 1
Query: 7 QAKRMLSTTHVKTLQKQGYKIIGSHSGVKLCRWTKSMLRGRGGCYKHTFYGIASHLCMEMTPSMACANKCVFCWRHHKNPVTREWRWEQDEPHFIIDQAVAKHRQMIKSCKGIPGVVPERYEEAFQPRHCALSLVGEPIIYPEINAFLRYMHEQRISSFMVTNAQFPAEISSLVPVTQLYVSIDAGNEEDLRKIDRPLFVDFWQRFLDSIAALSAKGQRTVFRLTLVKDYNMDSV 711
+AK M++ + K L KQGYKIIGSHSGVKLCRWTK+MLRGRGGCYKHTFYGI+S CMEMTPS+ACANKCVFCWRHHKNPV REWRW+ D+P +ID A+ +HR M+K KG+PGV +RYEE+ +HCALSLVGEPIIYP IN F+ Y+HE+ ISSF+VTNAQFP I++L PVTQLYVSIDA NEEDL++IDRPLF DFWQRFLDSI AL GQRTVFRLTLVK +NMD +
Sbjct: 319 EAKEMVTESLRKNLTKQGYKIIGSHSGVKLCRWTKAMLRGRGGCYKHTFYGISSFQCMEMTPSLACANKCVFCWRHHKNPVGREWRWKADDPKMLIDGAIEQHRGMMKQMKGVPGVKKDRYEESMNVKHCALSLVGEPIIYPHINEFVGYLHEKNISSFLVTNAQFPELITALPPVTQLYVSIDASNEEDLKRIDRPLFTDFWQRFLDSIEALGKTGQRTVFRLTLVKGWNMDEL 553
BLAST of mRNA_M-pyrifera_M_contig94708.21849.1 vs. uniprot
Match: A0A4P9YNJ0_ROZAC (Tyw1 protein (Fragment) n=1 Tax=Rozella allomycis (strain CSF55) TaxID=988480 RepID=A0A4P9YNJ0_ROZAC) HSP 1 Score: 356 bits (913), Expect = 3.160e-120 Identity = 160/235 (68.09%), Postives = 197/235 (83.83%), Query Frame = 1
Query: 7 QAKRMLSTTHVKTLQKQGYKIIGSHSGVKLCRWTKSMLRGRGGCYKHTFYGIASHLCMEMTPSMACANKCVFCWRHHKNPVTREWRWEQDEPHFIIDQAVAKHRQMIKSCKGIPGVVPERYEEAFQPRHCALSLVGEPIIYPEINAFLRYMHEQRISSFMVTNAQFPAEISSLVPVTQLYVSIDAGNEEDLRKIDRPLFVDFWQRFLDSIAALSAKGQRTVFRLTLVKDYNMDSV 711
+ K M++ ++LQKQGYKIIGSHSGVK+CRWTKSMLRGRGGCYKHTFYGI SH CME TPS+ACANKCVFCWRHH NPV EW+W+ D F+++ A+ H++MIK KG+PGV ER +EAF+ +HCALSLVGEPI+YPEIN F+ +H++RISSF+VTNAQFP I+SLVPVTQLYVS+DA +E L+KIDRPLF DFW+RFL S++ LS KGQRTV+RLTLVKD+N++ +
Sbjct: 1 EVKEMVTPIVRESLQKQGYKIIGSHSGVKICRWTKSMLRGRGGCYKHTFYGIESHRCMETTPSLACANKCVFCWRHHTNPVGTEWKWKMDNAEFVLNGAIENHQKMIKQMKGVPGVGQERMDEAFEIKHCALSLVGEPIMYPEINQFVTLLHQKRISSFLVTNAQFPELITSLVPVTQLYVSVDAATKESLKKIDRPLFKDFWERFLASLSELSKKGQRTVYRLTLVKDFNVNEL 235
BLAST of mRNA_M-pyrifera_M_contig94708.21849.1 vs. uniprot
Match: A0A498LF57_LABRO (S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase isoform X1 n=1 Tax=Labeo rohita TaxID=84645 RepID=A0A498LF57_LABRO) HSP 1 Score: 353 bits (907), Expect = 4.210e-120 Identity = 160/223 (71.75%), Postives = 185/223 (82.96%), Query Frame = 1
Query: 46 LQKQGYKIIGSHSGVKLCRWTKSMLRGRGGCYKHTFYGIASHLCMEMTPSMACANKCVFCWRHHKNPVTREWRWEQDEPHFIIDQAVAKHRQMIKSCKGIPGVVPERYEEAFQPRHCALSLVGEPIIYPEINAFLRYMHEQRISSFMVTNAQFPAEISSLVPVTQLYVSIDAGNEEDLRKIDRPLFVDFWQRFLDSIAALSAKGQRTVFRLTLVKDYNMDSVR 714
L KQGYK+IGSHSGVKLCRWTKSMLRGRGGCYKHTFYGI SH CME TPS+ACANKCVFCWRHH NPV EWRW+ D II +AV HR MI+ +G+PGV PER+EE +HCALSLVGEPI+YPEIN+FLR +H+Q ISSF+VTNAQFP EI +LVPVTQLYVS+DA ++ L+KIDRPLF DFWQRFLDS+ L K QRTV+RLTLVK +N+D ++
Sbjct: 78 LTKQGYKLIGSHSGVKLCRWTKSMLRGRGGCYKHTFYGIESHRCMETTPSLACANKCVFCWRHHTNPVGTEWRWKMDPAEKIIQEAVENHRNMIRQFRGVPGVRPERFEEGLTVKHCALSLVGEPIMYPEINSFLRLLHQQNISSFLVTNAQFPEEIRNLVPVTQLYVSVDASTKDSLKKIDRPLFKDFWQRFLDSLKELGEKQQRTVYRLTLVKAWNVDELK 300
BLAST of mRNA_M-pyrifera_M_contig94708.21849.1 vs. uniprot
Match: A0A7S0E466_9CRYP (tRNA 4-demethylwyosine synthase (AdoMet-dependent) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0E466_9CRYP) HSP 1 Score: 360 bits (925), Expect = 2.730e-119 Identity = 162/233 (69.53%), Postives = 193/233 (82.83%), Query Frame = 1
Query: 13 KRMLSTTHVKTLQKQGYKIIGSHSGVKLCRWTKSMLRGRGGCYKHTFYGIASHLCMEMTPSMACANKCVFCWRHHKNPVTREWRWEQDEPHFIIDQAVAKHRQMIKSCKGIPGVVPERYEEAFQPRHCALSLVGEPIIYPEINAFLRYMHEQRISSFMVTNAQFPAEISSLVPVTQLYVSIDAGNEEDLRKIDRPLFVDFWQRFLDSIAALSAKGQRTVFRLTLVKDYNMDSV 711
K+ML++ +L KQGYK++GSHSGVKLCRWTKSMLRGRGGCYKHTFYGIAS+ CME TPS+ACANKCVFCWRHHKNPV WRWE D+P F++D ++KHR MIK +G+PGV+P+R EEA RHCALSLVGEPIIYP IN F+ +HEQ IS+F+V+NAQFPA++ +LVP TQLYVSIDA N E+L+ +DRPLF DFW+RFL+ I L KGQRTVFRLTLVK +NM V
Sbjct: 197 KKMLNSALEASLTKQGYKLVGSHSGVKLCRWTKSMLRGRGGCYKHTFYGIASYQCMEATPSLACANKCVFCWRHHKNPVGTSWRWETDDPQFLVDGFISKHRAMIKEMRGLPGVLPDRLEEADTVRHCALSLVGEPIIYPHINKFINLLHEQSISTFLVSNAQFPAQMENLVPCTQLYVSIDASNAEELKAVDRPLFSDFWERFLECIDILERKGQRTVFRLTLVKSFNMSEV 429
BLAST of mRNA_M-pyrifera_M_contig94708.21849.1 vs. uniprot
Match: L1JNZ4_GUITC (tRNA 4-demethylwyosine synthase (AdoMet-dependent) n=2 Tax=Guillardia theta TaxID=55529 RepID=L1JNZ4_GUITC) HSP 1 Score: 361 bits (927), Expect = 3.220e-119 Identity = 163/233 (69.96%), Postives = 193/233 (82.83%), Query Frame = 1
Query: 13 KRMLSTTHVKTLQKQGYKIIGSHSGVKLCRWTKSMLRGRGGCYKHTFYGIASHLCMEMTPSMACANKCVFCWRHHKNPVTREWRWEQDEPHFIIDQAVAKHRQMIKSCKGIPGVVPERYEEAFQPRHCALSLVGEPIIYPEINAFLRYMHEQRISSFMVTNAQFPAEISSLVPVTQLYVSIDAGNEEDLRKIDRPLFVDFWQRFLDSIAALSAKGQRTVFRLTLVKDYNMDSV 711
K+ML+ + +L KQGYK++GSHSGVKLCRWTKSMLRGRGGCYKHTFYGIAS+ CME TPS+ACANKCVFCWRHHKNPV WRWE D+P F++D V+KHR MIK +G+PGV+PER EEA RHCALSLVGEPIIYP IN F+ +HEQ IS+F+V+NAQFP+++ +LVP TQLYVSIDA N E+L+ +DRPLF DFW+RFL+ I L KGQRTVFRLTLVK +NM V
Sbjct: 227 KKMLNPSLEASLTKQGYKLVGSHSGVKLCRWTKSMLRGRGGCYKHTFYGIASYQCMEATPSLACANKCVFCWRHHKNPVGTSWRWETDDPQFLVDGFVSKHRAMIKEMRGLPGVIPERLEEADTVRHCALSLVGEPIIYPHINKFINLLHEQSISTFLVSNAQFPSQMENLVPCTQLYVSIDASNAEELKAVDRPLFSDFWERFLECIDILDRKGQRTVFRLTLVKSFNMSEV 459
BLAST of mRNA_M-pyrifera_M_contig94708.21849.1 vs. uniprot
Match: A0A8M1KQH4_CLUHA (S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase TYW1 isoform X2 n=1 Tax=Clupea harengus TaxID=7950 RepID=A0A8M1KQH4_CLUHA) HSP 1 Score: 353 bits (905), Expect = 1.790e-118 Identity = 160/223 (71.75%), Postives = 187/223 (83.86%), Query Frame = 1
Query: 46 LQKQGYKIIGSHSGVKLCRWTKSMLRGRGGCYKHTFYGIASHLCMEMTPSMACANKCVFCWRHHKNPVTREWRWEQDEPHFIIDQAVAKHRQMIKSCKGIPGVVPERYEEAFQPRHCALSLVGEPIIYPEINAFLRYMHEQRISSFMVTNAQFPAEISSLVPVTQLYVSIDAGNEEDLRKIDRPLFVDFWQRFLDSIAALSAKGQRTVFRLTLVKDYNMDSVR 714
L KQGYK+IGSHSGVKLCRWTKSMLRGRGGCYKHTFYGI SH CME TPS+ACANKCVFCWRHH NPV EWRW+ D I+ +AV H+ MIK +G+PGV P+R+EE +HCALSLVGEPI+YPEINAFLR +H+QRISSF+VTNAQFP EI SLVPVTQLYVS+DA ++ L++IDRPLF DFWQRFLDS+ +L K QRTV+RLTLVK +N+D ++
Sbjct: 49 LTKQGYKLIGSHSGVKLCRWTKSMLRGRGGCYKHTFYGIESHRCMEATPSLACANKCVFCWRHHTNPVGTEWRWKMDPADKILLEAVENHQSMIKQFRGVPGVRPDRFEEGLAVKHCALSLVGEPIMYPEINAFLRLLHQQRISSFLVTNAQFPDEIRSLVPVTQLYVSVDASTKDSLKRIDRPLFKDFWQRFLDSLRSLGEKQQRTVYRLTLVKAWNVDELK 271
BLAST of mRNA_M-pyrifera_M_contig94708.21849.1 vs. uniprot
Match: A0A075B328_ROZAC (tRNA 4-demethylwyosine synthase (AdoMet-dependent) n=1 Tax=Rozella allomycis (strain CSF55) TaxID=988480 RepID=A0A075B328_ROZAC) HSP 1 Score: 356 bits (914), Expect = 1.140e-117 Identity = 160/236 (67.80%), Postives = 198/236 (83.90%), Query Frame = 1
Query: 4 AQAKRMLSTTHVKTLQKQGYKIIGSHSGVKLCRWTKSMLRGRGGCYKHTFYGIASHLCMEMTPSMACANKCVFCWRHHKNPVTREWRWEQDEPHFIIDQAVAKHRQMIKSCKGIPGVVPERYEEAFQPRHCALSLVGEPIIYPEINAFLRYMHEQRISSFMVTNAQFPAEISSLVPVTQLYVSIDAGNEEDLRKIDRPLFVDFWQRFLDSIAALSAKGQRTVFRLTLVKDYNMDSV 711
++ K M++ ++LQKQGYKIIGSHSGVK+CRWTKSMLRGRGGCYKHTFYGI SH CME TPS+ACANKCVFCWRHH NPV EW+W+ D F+++ A+ H++MIK KG+PGV ER +EAF+ +HCALSLVGEPI+YPEIN F+ +H++RISSF+VTNAQFP I+SLVPVTQLYVS+DA +E L+KIDRPLF DFW+RFL S++ LS KGQRTV+RLTLVKD+N++ +
Sbjct: 201 SEVKEMVTPIVRESLQKQGYKIIGSHSGVKICRWTKSMLRGRGGCYKHTFYGIESHRCMETTPSLACANKCVFCWRHHTNPVGTEWKWKMDNAEFVLNGAIENHQKMIKQMKGVPGVGQERMDEAFEIKHCALSLVGEPIMYPEINQFVTLLHQKRISSFLVTNAQFPELITSLVPVTQLYVSVDAATKESLKKIDRPLFKDFWERFLASLSELSKKGQRTVYRLTLVKDFNVNEL 436
BLAST of mRNA_M-pyrifera_M_contig94708.21849.1 vs. uniprot
Match: A0A8C9QXW1_SCLFO (tRNA 4-demethylwyosine synthase (AdoMet-dependent) n=5 Tax=Scleropages formosus TaxID=113540 RepID=A0A8C9QXW1_SCLFO) HSP 1 Score: 361 bits (926), Expect = 1.270e-117 Identity = 163/232 (70.26%), Postives = 191/232 (82.33%), Query Frame = 1
Query: 19 MLSTTHVKTLQKQGYKIIGSHSGVKLCRWTKSMLRGRGGCYKHTFYGIASHLCMEMTPSMACANKCVFCWRHHKNPVTREWRWEQDEPHFIIDQAVAKHRQMIKSCKGIPGVVPERYEEAFQPRHCALSLVGEPIIYPEINAFLRYMHEQRISSFMVTNAQFPAEISSLVPVTQLYVSIDAGNEEDLRKIDRPLFVDFWQRFLDSIAALSAKGQRTVFRLTLVKDYNMDSVR 714
M++ + L KQGYK+IGSHSGVKLCRWTKSMLRGRGGCYKHTFYGI SH CME TPS+ACANKCVFCWRHH NPV EWRW+ D P I+ +A+ H+ MIK +G+PGV PER+EE +HCALSLVGEPI+YPEINAF+R +H QRISSF+VTNAQFP EI SLVPVTQLYVS+DA ++ L+KIDRPLF DFWQRFLDS+ AL K QRTV+RLTLVK +N+D ++
Sbjct: 360 MITPALREALTKQGYKLIGSHSGVKLCRWTKSMLRGRGGCYKHTFYGIESHRCMEATPSLACANKCVFCWRHHTNPVGTEWRWKMDPPEIILQEALQNHQNMIKQFRGVPGVRPERFEEGLTAKHCALSLVGEPIMYPEINAFIRLLHRQRISSFLVTNAQFPEEIRSLVPVTQLYVSVDASTKDSLKKIDRPLFKDFWQRFLDSLKALGEKQQRTVYRLTLVKAWNVDELK 591
BLAST of mRNA_M-pyrifera_M_contig94708.21849.1 vs. uniprot
Match: A0A7K9ZA83_9GALL (TYW1 synthase (Fragment) n=1 Tax=Odontophorus gujanensis TaxID=886794 RepID=A0A7K9ZA83_9GALL) HSP 1 Score: 350 bits (897), Expect = 2.180e-117 Identity = 159/223 (71.30%), Postives = 185/223 (82.96%), Query Frame = 1
Query: 46 LQKQGYKIIGSHSGVKLCRWTKSMLRGRGGCYKHTFYGIASHLCMEMTPSMACANKCVFCWRHHKNPVTREWRWEQDEPHFIIDQAVAKHRQMIKSCKGIPGVVPERYEEAFQPRHCALSLVGEPIIYPEINAFLRYMHEQRISSFMVTNAQFPAEISSLVPVTQLYVSIDAGNEEDLRKIDRPLFVDFWQRFLDSIAALSAKGQRTVFRLTLVKDYNMDSVR 714
L KQGYK+IGSHSGVKLCRWTKSMLRGRGGCYKHTFYGI SH CME TPS+ACANKCVFCWRHH NPV EWRW+ D+P I+ +A+ HR MIK KG+ GV ER+EEA +HCALSLVGEPI+YP IN FLR +H++ ISSF+VTNAQFP EI +L PVTQLYVS+DA +E L++IDRPLF DFWQRFLDS+ ALS K QRTV+RLTLVK +N+D ++
Sbjct: 40 LTKQGYKLIGSHSGVKLCRWTKSMLRGRGGCYKHTFYGIESHRCMEATPSLACANKCVFCWRHHTNPVGTEWRWKMDQPEVILREALENHRNMIKEFKGVTGVRAERFEEAMTAKHCALSLVGEPIMYPNINHFLRLLHQRGISSFLVTNAQFPEEIRNLEPVTQLYVSVDASTKESLKRIDRPLFKDFWQRFLDSLKALSEKQQRTVYRLTLVKAWNVDELK 262 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig94708.21849.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig94708.21849.1 >prot_M-pyrifera_M_contig94708.21849.1 ID=prot_M-pyrifera_M_contig94708.21849.1|Name=mRNA_M-pyrifera_M_contig94708.21849.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=232bp MLSTTHVKTLQKQGYKIIGSHSGVKLCRWTKSMLRGRGGCYKHTFYGIASback to top mRNA from alignment at M-pyrifera_M_contig94708:25..738+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig94708.21849.1 ID=mRNA_M-pyrifera_M_contig94708.21849.1|Name=mRNA_M-pyrifera_M_contig94708.21849.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=714bp|location=Sequence derived from alignment at M-pyrifera_M_contig94708:25..738+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig94708:25..738+ >mRNA_M-pyrifera_M_contig94708.21849.1 ID=mRNA_M-pyrifera_M_contig94708.21849.1|Name=mRNA_M-pyrifera_M_contig94708.21849.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1392bp|location=Sequence derived from alignment at M-pyrifera_M_contig94708:25..738+ (Macrocystis pyrifera P11B4 male)back to top |