prot_M-pyrifera_M_contig94619.21830.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig94619.21830.1
Unique Nameprot_M-pyrifera_M_contig94619.21830.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length115
Homology
BLAST of mRNA_M-pyrifera_M_contig94619.21830.1 vs. uniprot
Match: A9US61_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9US61_MONBE)

HSP 1 Score: 68.6 bits (166), Expect = 8.400e-12
Identity = 37/113 (32.74%), Postives = 55/113 (48.67%), Query Frame = 0
Query:    2 SYHVNIRTRQCRKMEIPSEFKFPTIQVPDDAHFAGWRTIGAPGDAVTVSSWFRDDGRNTTEMWRFTRPVAGTDKCLPTRHDGMSEETGFHYLELEDATIGV-DPNEFPVPREC 113
            +Y  N+ T +C    I   F F    +  +A F G+ T+G   D++T+S W   +     E          T +C+P R D M  ++GFHY E  D T+GV DPN +  P +C
Sbjct:   94 AYVTNLTTGKCTSYNI--NFPFRHHDINPNARFVGYETLGNSEDSITLSQWVAVNQTYHGEPGAHVYQTF-TQECVPVRDDVMVPDSGFHYEEFTDVTLGVQDPNIWIPPADC 203          
BLAST of mRNA_M-pyrifera_M_contig94619.21830.1 vs. uniprot
Match: UPI001CF1F92F (mammalian ependymin-related protein 1-like n=2 Tax=Acropora TaxID=6127 RepID=UPI001CF1F92F)

HSP 1 Score: 55.8 bits (133), Expect = 4.920e-7
Identity = 34/108 (31.48%), Postives = 50/108 (46.30%), Query Frame = 0
Query:   12 CRKMEIPSEFKFPTIQVPDDAHFAGWRTIGA---PGDAVTVSSWFRDDGRNTTEMWRFTRPVAGTDK--CLPTRHDGMSEETGFHYLELEDATIGVDPNEFPVPRECE 114
            C K  +   F    I++P++A   G  TIG    PG  VTV++++             T P    D+  C+P     +SE+ G  +    D  +GVDP EF  P+ECE
Sbjct:   95 CEKKPLTEPFH--KIKIPENATSMGLATIGTNAVPGLGVTVAAFYGRTPAGDQYYVSVTEPKMIKDRMMCIPISEVLLSEKLGRVHTSFFDVELGVDPEEFVPPKECE 200          
BLAST of mRNA_M-pyrifera_M_contig94619.21830.1 vs. uniprot
Match: A0A2B4S3F7_STYPI (Mammalian ependymin-related protein 1 n=1 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4S3F7_STYPI)

HSP 1 Score: 55.1 bits (131), Expect = 8.380e-7
Identity = 37/111 (33.33%), Postives = 54/111 (48.65%), Query Frame = 0
Query:    8 RTRQCRKMEIPSEFKFPTIQVPDDAHFAGWRTIGA---PGDAVTVSSWFRD-DGRNTTEMWRFTRPVAGTDKCLPTRHDGMSEETGFHYLELEDATIGVDPNEFPVPRECE 114
            RT +C K ++   F     ++PD+A   G  TIG+   PG  V V+ +  + DG       RF   V  T+ CLP   +  ++  G  ++   D  +GVDP  F  PRECE
Sbjct:   92 RTGKCEKKKLSEPFH--KFKIPDNATAIGEATIGSNALPGAGVNVAFFTGEIDGD------RFFLTVT-TEGCLPVHQNIETKTAGTMHIGYYDLELGVDPERFVPPRECE 193          
BLAST of mRNA_M-pyrifera_M_contig94619.21830.1 vs. uniprot
Match: UPI0009E527C0 (mammalian ependymin-related protein 1-like n=2 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E527C0)

HSP 1 Score: 53.1 bits (126), Expect = 3.980e-6
Identity = 33/110 (30.00%), Postives = 52/110 (47.27%), Query Frame = 0
Query:    8 RTRQCRKMEIPSEFKFPTIQVPDDAHFAGWRTIGA---PGDAVTVSSWFRDDGRNTTEMWRFTRPVAGTDKCLPTRHDGMSEETGFHYLELEDATIGVDPNEFPVPRECE 114
            +T +C K ++   F     ++P +A F G  TIG+   PG  V V+ +    G    + +  T    G   C+P   + +S++ GF +    D  +GVDP  F  P ECE
Sbjct:   83 KTGKCVKKDLDEPFH--RFEIPSNATFYGEATIGSNALPGLGVNVALF---GGEMGDDRYYVTVTEPG---CVPVHENVVSKKYGFIHTSFFDVELGVDPERFVPPSECE 184          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig94619.21830.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A9US61_MONBE8.400e-1232.74Predicted protein n=1 Tax=Monosiga brevicollis Tax... [more]
UPI001CF1F92F4.920e-731.48mammalian ependymin-related protein 1-like n=2 Tax... [more]
A0A2B4S3F7_STYPI8.380e-733.33Mammalian ependymin-related protein 1 n=1 Tax=Styl... [more]
UPI0009E527C03.980e-630.00mammalian ependymin-related protein 1-like n=2 Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001299EpendyminPFAMPF00811Ependymincoord: 2..113
e-value: 8.4E-16
score: 58.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig94619contigM-pyrifera_M_contig94619:375..719 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig94619.21830.1mRNA_M-pyrifera_M_contig94619.21830.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig94619 375..740 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig94619.21830.1 ID=prot_M-pyrifera_M_contig94619.21830.1|Name=mRNA_M-pyrifera_M_contig94619.21830.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=115bp
MSYHVNIRTRQCRKMEIPSEFKFPTIQVPDDAHFAGWRTIGAPGDAVTVS
SWFRDDGRNTTEMWRFTRPVAGTDKCLPTRHDGMSEETGFHYLELEDATI
GVDPNEFPVPRECE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001299Ependymin