prot_M-pyrifera_M_contig94201.21752.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig94201.21752.1
Unique Nameprot_M-pyrifera_M_contig94201.21752.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length214
Homology
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BLAST of mRNA_M-pyrifera_M_contig94201.21752.1 vs. uniprot
Match: A0A7J9WPV6_9ACTN (Uncharacterized protein n=1 Tax=Nitriliruptorales bacterium TaxID=2497630 RepID=A0A7J9WPV6_9ACTN)

HSP 1 Score: 53.5 bits (127), Expect = 5.120e-5
Identity = 78/236 (33.05%), Postives = 98/236 (41.53%), Query Frame = 0 
Query:   11 TLAGAVLLALPLPGPPP--DHNDLVGWWESSGTATATASILRLVALVLVGWTLLAV-VIGLVAATTRAAPAVLAWRLAAPPMLRRGLL-ATAIVSTTALPTTAGAADSGEPV---AIVQELGP---AQLLA--NAPLPMLFDLGTAAEEEADEPTSPPTTA-----------------QSATETWTVQRGDHLWHIAEQTLHERGEAATVD-AITTYWQRVIETNRDIVGT--NPD 214
            TL G V L     G PP  D      W  S     A  ++LRL  L L GW LLAV VIGLV      A  V    +   P++RR L  A  +   TA  T+ G   +  PV   AI     P   AQ++A       ++   G+  E  +  P  PP+T                  Q+ T  WTV  G+H W IAEQ L E          I  YW  +IE NRD++    NPD
Sbjct:   17 TLLGLVALGDGPLGAPPLADPRAWSAWASSRPPLAAVFAVLRLAVLGL-GWYLLAVSVIGLVLRLVHLARLVAIADVITVPVVRRLLQGAIGVGLVTAAVTSVGTGRTPPPVSAAAIEMAASPTPAAQIMAPSGGGTALIASPGSTLETSST-PLQPPSTRPWVTRDPXXXXXXXXEHQAETRRWTVSSGEHFWSIAEQVLEEAWRRPVEGHEIVPYWTSLIEANRDVLADPGNPD 250
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig94201.21752.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7J9WPV6_9ACTN5.120e-533.05Uncharacterized protein n=1 Tax=Nitriliruptorales ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..42
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 43..70
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 71..214
NoneNo IPR availableTMHMMTMhelixcoord: 2..24
NoneNo IPR availableTMHMMTMhelixcoord: 48..70

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig94201contigM-pyrifera_M_contig94201:3..644 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig94201.21752.1mRNA_M-pyrifera_M_contig94201.21752.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig94201 3..644 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig94201.21752.1 ID=prot_M-pyrifera_M_contig94201.21752.1|Name=mRNA_M-pyrifera_M_contig94201.21752.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=214bp
PALVAAAAAATLAGAVLLALPLPGPPPDHNDLVGWWESSGTATATASILR
LVALVLVGWTLLAVVIGLVAATTRAAPAVLAWRLAAPPMLRRGLLATAIV
STTALPTTAGAADSGEPVAIVQELGPAQLLANAPLPMLFDLGTAAEEEAD
EPTSPPTTAQSATETWTVQRGDHLWHIAEQTLHERGEAATVDAITTYWQR
VIETNRDIVGTNPD
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