prot_M-pyrifera_M_contig93750.21651.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig93750.21651.1
Unique Nameprot_M-pyrifera_M_contig93750.21651.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length67
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig93750.21651.1 vs. uniprot
Match: A0A517PPQ2_9PLAN (Ankyrin repeats (3 copies) n=2 Tax=Gimesia chilikensis TaxID=2605989 RepID=A0A517PPQ2_9PLAN)

HSP 1 Score: 142 bits (358), Expect = 2.210e-42
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0 
Query:    1 MVRFLLQHGANKSAVDSFGKRAQDYAFQLIDPAWKDQWGNTAADCWDTGQRNIIETIIDLLDDQRD 66
            MVRFLLQHGANKSAVDSFGKRAQDYAFQLIDPAWKDQWGNTAADCWDTGQRNIIETIIDLLDDQRD
Sbjct:   64 MVRFLLQHGANKSAVDSFGKRAQDYAFQLIDPAWKDQWGNTAADCWDTGQRNIIETIIDLLDDQRD 129
[Close]
BLAST of mRNA_M-pyrifera_M_contig93750.21651.1 vs. uniprot
Match: A0A518A7H8_9PLAN (Uncharacterized protein n=3 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518A7H8_9PLAN)

HSP 1 Score: 104 bits (260), Expect = 1.820e-27
Identity = 50/66 (75.76%), Postives = 53/66 (80.30%), Query Frame = 0 
Query:    1 MVRFLLQHGANKSAVDSFGKRAQDYAFQLIDPAWKDQWGNTAADCWDTGQRNIIETIIDLLDDQRD 66
            MVR LL HGA+K+ VDSFGK AQDY  QLIDP WKD WGN+AADCWD   RN IETIIDLLD QRD
Sbjct:   64 MVRLLLCHGADKTIVDSFGKCAQDYVLQLIDPDWKDPWGNSAADCWDAECRNDIETIIDLLDYQRD 129
[Close]
BLAST of mRNA_M-pyrifera_M_contig93750.21651.1 vs. uniprot
Match: A6CCT9_9PLAN (Uncharacterized protein n=2 Tax=Gimesia maris TaxID=122 RepID=A6CCT9_9PLAN)

HSP 1 Score: 75.1 bits (183), Expect = 2.660e-16
Identity = 36/63 (57.14%), Postives = 45/63 (71.43%), Query Frame = 0 
Query:    1 MVRFLLQHGANKSAVDSFGKRAQDYAFQLIDPAWKDQWGNTAADCWDTGQRNIIETIIDLLDD 63
            MV  LL +GA+ S VDSFG +A+DYA QLIDP WKD++G +A + WD  Q   +E II LLDD
Sbjct:   21 MVLVLLSYGADISMVDSFGNKAKDYAAQLIDPKWKDEFGYSAVEYWDEEQMKSVEEIICLLDD 83
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig93750.21651.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A517PPQ2_9PLAN2.210e-42100.00Ankyrin repeats (3 copies) n=2 Tax=Gimesia chilike... [more]
A0A518A7H8_9PLAN1.820e-2775.76Uncharacterized protein n=3 Tax=Gimesia panareensi... [more]
A6CCT9_9PLAN2.660e-1657.14Uncharacterized protein n=2 Tax=Gimesia maris TaxI... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig93750contigM-pyrifera_M_contig93750:15..215 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig93750.21651.1mRNA_M-pyrifera_M_contig93750.21651.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig93750 3..215 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig93750.21651.1 ID=prot_M-pyrifera_M_contig93750.21651.1|Name=mRNA_M-pyrifera_M_contig93750.21651.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=67bp
MVRFLLQHGANKSAVDSFGKRAQDYAFQLIDPAWKDQWGNTAADCWDTGQ
RNIIETIIDLLDDQRD*
back to top