mRNA_M-pyrifera_M_contig91793.21256.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig91793.21256.1
Unique NamemRNA_M-pyrifera_M_contig91793.21256.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig91793.21256.1 vs. uniprot
Match: UPI0004F43115 (cytosolic malate dehydrogenase n=1 Tax=Trypanosoma grayi TaxID=71804 RepID=UPI0004F43115)

HSP 1 Score: 232 bits (591), Expect = 7.820e-72
Identity = 133/267 (49.81%), Postives = 170/267 (63.67%), Query Frame = 1
Query:    4 VARGLMFGPSQRVRVHLFDLAAMRDRMEGVRMELEDVGESLVDEVVVSVDAEEAFRGVDYALLVGAKPRGKGMERKDLLVENAAIFVEQGRLLGRFS-PACKVLVVGNPANTNAF-LVGASGDALDRRNITALTRLDQNRLEGMVKCRRSKGGGQRGGVVGCVVWGNHSATQVGDVSGCE-------EAVAMGLVEDEAFARTLQQRGKAVIEKRGLSSALSAAMAICDHMRDWVLGS-RGKAVSMGVWSEGNPYGIDPRLVFSFPV 774
            +A G M GPSQ V+++L D+      +EGV+ EL D G +L+D+VV++ D + AF+ VD A+L G+ PR  GMERKDLL  NA IF EQGR+LG  + P C V VVGNPANTNA  L+ AS   L   N+TALTRLD NR   ++  R         GV  C++WGNHS TQV D++           A+  G   D+ F  T+QQRG  +I+ RGLSSALSAA AI DH+ DW+LG+  G  VSM V S+ NPYG+   L+FSFPV
Sbjct:   27 IASGRMLGPSQHVQLNLLDIEPAMKALEGVQAELVDCGYTLLDKVVITSDQKVAFKNVDVAILCGSFPRKAGMERKDLLQINAKIFAEQGRVLGEVAAPDCHVCVVGNPANTNALILLQASQGKLKPTNVTALTRLDHNRATALLAARADA---SVEGVKNCIIWGNHSGTQVPDINSARVKGKPARAALEPGAFRDDEFIATVQQRGAEIIKLRGLSSALSAAKAITDHVHDWMLGTPEGTHVSMAVCSDNNPYGVPAGLIFSFPV 290          
BLAST of mRNA_M-pyrifera_M_contig91793.21256.1 vs. uniprot
Match: L1JY01_GUITC (Malate dehydrogenase n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JY01_GUITC)

HSP 1 Score: 228 bits (580), Expect = 4.370e-70
Identity = 129/269 (47.96%), Postives = 168/269 (62.45%), Query Frame = 1
Query:    4 VARGLMFGPSQRVRVHLFDLAAMRDRMEGVRMELEDVGESLVDEVVVSVDAEEAFRGVDYALLVGAKPRGKGMERKDLLVENAAIFVEQGRLLGRF-SPACKVLVVGNPANTNAFLVGASGDALDRRNITALTRLDQNRLEGMVKCRRSKGGGQRGGVVGCVVWGNHSATQVGDVSGCEEAVAMG------LVEDEA-----FARTLQQRGKAVIEKRGLSSALSAAMAICDHMRDWVLGSRGKAVSMGVWSEGNPYGIDPRLVFSFPV 774
            +  G  FGPS ++ +HL D+   +  + GV+MELED G  L++EVVV+ DA  AF G+D  +++GA PRG GMERKDLL +N  IF EQGRLL    S   KV+VVGNPANTNA +      ++ + N TALTRLD NR +  +  R          V  C +WGNHS+TQ  DVS    A A G      ++++       F + +QQRG A+I  R LSSA+SAA AI DHM DWV+GS GK VSM V S+G+ YGI+  L++SFPV
Sbjct:   20 ICSGRTFGPSTKIILHLLDIPRAQQALMGVKMELEDCGFDLLEEVVVTSDANVAFTGIDACIMLGAFPRGPGMERKDLLAKNCNIFKEQGRLLNEVASKNVKVVVVGNPANTNALVAQQCAPSIPKENFTALTRLDHNRAQSQIAMRLKV---PSSAVENCTIWGNHSSTQYPDVSNSVVATAQGKQKVGDVIQNPGYLHGEFIKVVQQRGAAIINARKLSSAMSAAKAISDHMHDWVVGSNGKTVSMAVPSDGS-YGIEKGLIYSFPV 284          
BLAST of mRNA_M-pyrifera_M_contig91793.21256.1 vs. uniprot
Match: A0A2G6N2D8_9DELT (Malate dehydrogenase n=2 Tax=Desulfobacterales TaxID=213118 RepID=A0A2G6N2D8_9DELT)

HSP 1 Score: 223 bits (568), Expect = 1.970e-68
Identity = 132/264 (50.00%), Postives = 161/264 (60.98%), Query Frame = 1
Query:    4 VARGLMFGPSQRVRVHLFDLAAMRDRMEGVRMELEDVGESLVDEVVVSVDAEEAFRGVDYALLVGAKPRGKGMERKDLLVENAAIFVEQGRLLG-RFSPACKVLVVGNPANTNAFLVGASGDALDRRNITALTRLDQNRLEGMVKCRRSKGGGQRGGVVGCVVWGNHSATQVGDVSGC--EEAVAMGLVED----EAFARTLQQRGKAVIEKRGLSSALSAAMAICDHMRDWVLGSRGKAVSMGVWSEGNPYGIDPRLVFSFPV 774
            +A G M GP Q V + L ++    D + GV MEL D    LV  VV + DA  AF+  D+A+LVGA+PRG GMER DLL  NAAIF  QG+ +    S   KVLVVGNPANTNA +   +   +D RNITA+ RLD NR    +     K G     V   VVWGNHSATQ  D+S    +   A  LV+D    + F   +QQRG A+I+ RG SSA SAA A  DHMR W LGS GK VSMGV S+GNPYGID  +++SFP+
Sbjct:   24 IASGSMLGPDQPVILQLLEIPPAMDALNGVVMELNDCAFPLVAGVVATDDANVAFKDADFAILVGARPRGPGMERSDLLEANAAIFSAQGKAINDNASKDIKVLVVGNPANTNALITQKNAPDIDPRNITAMMRLDHNRAMSQLA---EKTGAHSTDVEQMVVWGNHSATQYPDISYATVKGEAAKSLVDDAWNVDTFIPVVQQRGAAIIKARGASSAASAASAAVDHMRSWALGSEGKWVSMGVTSKGNPYGIDEDIIYSFPI 284          
BLAST of mRNA_M-pyrifera_M_contig91793.21256.1 vs. uniprot
Match: G0UD31_TRYVY (Malate dehydrogenase n=1 Tax=Trypanosoma vivax (strain Y486) TaxID=1055687 RepID=G0UD31_TRYVY)

HSP 1 Score: 222 bits (566), Expect = 3.830e-68
Identity = 132/268 (49.25%), Postives = 166/268 (61.94%), Query Frame = 1
Query:    1 LVARGLMFGPSQRVRVHLFDLAAMRDRMEGVRMELEDVGESLVDEVVVSVDAEEAFRGVDYALLVGAKPRGKGMERKDLLVENAAIFVEQGRLLGRF-SPACKVLVVGNPANTNAF-LVGASGDALDRRNITALTRLDQNRLEGMVKCRRSKGGGQRGGVVGCVVWGNHSATQVGDVSGC-------EEAVAMGLVEDEAFARTLQQRGKAVIEKRGLSSALSAAMAICDHMRDWVLGSR-GKAVSMGVWSEGNPYGIDPRLVFSFPV 774
            L+A G M G  Q V++ L D+   +  +EGVR EL D    L+D V+++ D + AF   D A+  GA PR  GMERKDLL  NA IF EQGR+LG   SP CKV VVGNPANTNA  L+ AS   ++ +N+TALTRLD NR   +V  R      +   V  CV+WGNHS TQV D++          EA+      D  F + +Q+RG  ++  RGLSSALSAA AI DH+RDW+LG+  G  VSM V S+GNPYGI   L+FSFPV
Sbjct:   22 LIASGRMLGEDQHVQLQLLDITPSQKALEGVRAELHDCAFPLLDNVIITDDPKVAFDRADVAIFCGAFPRKPGMERKDLLQTNAKIFSEQGRVLGEVASPGCKVCVVGNPANTNALVLLRASQGKINPKNVTALTRLDHNRATALVAQRARS---RVDTVKNCVIWGNHSGTQVPDLNNATVGGIAAREALKDDAFIDNDFMKRVQERGAEIMNLRGLSSALSAAKAITDHVRDWLLGTPVGTFVSMAVLSDGNPYGIPNGLIFSFPV 286          
BLAST of mRNA_M-pyrifera_M_contig91793.21256.1 vs. uniprot
Match: UPI001966BFD2 (malate dehydrogenase n=1 Tax=Desulfogranum marinum TaxID=453220 RepID=UPI001966BFD2)

HSP 1 Score: 222 bits (566), Expect = 3.940e-68
Identity = 128/264 (48.48%), Postives = 162/264 (61.36%), Query Frame = 1
Query:    4 VARGLMFGPSQRVRVHLFDLAAMRDRMEGVRMELEDVGESLVDEVVVSVDAEEAFRGVDYALLVGAKPRGKGMERKDLLVENAAIFVEQGRLLG-RFSPACKVLVVGNPANTNAFLVGASGDALDRRNITALTRLDQNRLEGMVKCRRSKGGGQRGGVVGCVVWGNHSATQVGDVSGC--EEAVAMGLVED----EAFARTLQQRGKAVIEKRGLSSALSAAMAICDHMRDWVLGSRGKAVSMGVWSEGNPYGIDPRLVFSFPV 774
            +A G M GP Q V + L ++      + GV MEL D    LV  +V + DA  AF+ +D+ LLVG++PRG GMER DLL  NA IF  QG+ L     P  K+LVVGNPANTNA +   +   L+ RNITA+ RLD NR +  +     K G     +   VVWGNHSATQ  D+S    +   A GLV+D    + F   +QQRG A+I+ RG SSA SAA A  DHMRDW LGS GK VSMGV+S GNPYGID  ++++FP+
Sbjct:   24 IASGSMLGPDQPVILQLLEIPPAMGALNGVVMELNDCAFPLVAGIVATDDANVAFKDIDFGLLVGSRPRGPGMERSDLLEANAQIFSAQGKALNDNAKPDVKILVVGNPANTNALITLKNAPDLNPRNITAMMRLDHNRAKSQLA---EKTGAHANDIEQMVVWGNHSATQYPDISYATVKGEAAKGLVDDAWNVDNFIPVVQQRGAAIIKARGASSAASAASAAVDHMRDWALGSEGKWVSMGVYSAGNPYGIDEDIIYAFPI 284          
BLAST of mRNA_M-pyrifera_M_contig91793.21256.1 vs. uniprot
Match: UPI001966B925 (malate dehydrogenase n=1 Tax=Desulfobulbus rhabdoformis TaxID=34032 RepID=UPI001966B925)

HSP 1 Score: 222 bits (566), Expect = 4.060e-68
Identity = 126/264 (47.73%), Postives = 162/264 (61.36%), Query Frame = 1
Query:    4 VARGLMFGPSQRVRVHLFDLAAMRDRMEGVRMELEDVGESLVDEVVVSVDAEEAFRGVDYALLVGAKPRGKGMERKDLLVENAAIFVEQGRLLG-RFSPACKVLVVGNPANTNAFLVGASGDALDRRNITALTRLDQNRLEGMVKCRRSKGGGQRGGVVGCVVWGNHSATQVGDVS--GCEEAVAMGLVED----EAFARTLQQRGKAVIEKRGLSSALSAAMAICDHMRDWVLGSRGKAVSMGVWSEGNPYGIDPRLVFSFPV 774
            +A G M GP Q V + L ++      ++GV MEL D    LV +V+ + D   AF+  ++ALLVG++PRG GMER DLL  N AIF  QG+ L    +P C+VLVVGNPANTNA +   +   L+ RN+TA+ RLD NR    +     K G     V   VVWGNHSATQ  D+S    +      LV+D    + F  T+QQRG A+I+ RG SSA SAA A  DHMR W LGS GK VSMG++S GNPYG+D  L+F+FP+
Sbjct:   24 IASGSMLGPDQPVILQLLEIPPAMGALQGVLMELNDCAFPLVADVIATDDPNVAFKDAEFALLVGSRPRGPGMERSDLLDANGAIFTVQGKALSDNANPNCRVLVVGNPANTNALICMKNAPKLNPRNVTAMMRLDHNRAMSQIA---EKAGSHSTKVEKVVVWGNHSATQYPDISYASVDGKAVKDLVDDAWNKDYFIPTVQQRGAAIIKARGASSAASAASAAVDHMRSWALGSEGKWVSMGIYSAGNPYGVDEDLMFAFPI 284          
BLAST of mRNA_M-pyrifera_M_contig91793.21256.1 vs. uniprot
Match: A0A2L1GMP3_9DELT (Malate dehydrogenase n=1 Tax=Desulfobulbus oralis TaxID=1986146 RepID=A0A2L1GMP3_9DELT)

HSP 1 Score: 222 bits (565), Expect = 5.740e-68
Identity = 129/264 (48.86%), Postives = 167/264 (63.26%), Query Frame = 1
Query:    4 VARGLMFGPSQRVRVHLFDLAAMRDRMEGVRMELEDVGESLVDEVVVSVDAEEAFRGVDYALLVGAKPRGKGMERKDLLVENAAIFVEQGRLLG-RFSPACKVLVVGNPANTNAFLVGASGDALDRRNITALTRLDQNRLEGMVKCRRSKGGGQRGGVVGCVVWGNHSATQVGDVSGCEEA---VAMGLVED---EAFARTLQQRGKAVIEKRGLSSALSAAMAICDHMRDWVLGSRGKAVSMGVWSEGNPYGIDPRLVFSFPV 774
            +A G M GP Q V + L ++    + ++GV MEL+D    LV  V+ S D   AF+  D+ALLVG++PRG GMER DLL  N AIF  QG+ L    +P C+VLVVGNPANTNA ++  S   L+ R+IT++TRLD NR    +     K G     V   VVWGNHS+TQ  D+S    A   V   + +D     F  T+Q+RG A+I+ RG SSA SAA A  +HMRDW LGS+G+ VSMGV+S+GNPYGID  L+FSFP+
Sbjct:   24 IASGSMLGPDQPVILQLLEIPPAMNALQGVLMELKDCAFPLVAGVIPSDDPNVAFKDADFALLVGSRPRGPGMERSDLLKANGAIFTVQGKALSDHANPDCRVLVVGNPANTNALILLKSAPKLNPRHITSMTRLDHNRSMAQIA---DKVGCHSSDVEQVVVWGNHSSTQYPDISYATAAGKPVRTAVADDWYKNDFIPTVQKRGAAIIKARGASSAASAANAAVEHMRDWALGSKGQWVSMGVYSKGNPYGIDEDLMFSFPI 284          
BLAST of mRNA_M-pyrifera_M_contig91793.21256.1 vs. uniprot
Match: A0A7S1MMC8_NEODS (Malate dehydrogenase n=1 Tax=Neobodo designis TaxID=312471 RepID=A0A7S1MMC8_NEODS)

HSP 1 Score: 222 bits (566), Expect = 6.110e-68
Identity = 129/270 (47.78%), Postives = 166/270 (61.48%), Query Frame = 1
Query:    4 VARGLMFGPSQRVRVHLFDLAAMRDRMEGVRMELEDVGESLVDEVVVSVDAEEAFRGVDYALLVGAKPRGKGMERKDLLVENAAIFVEQGRLLGRF-SPACKVLVVGNPANTNAFLVGASGD-ALDRRNITALTRLDQNRLEGMVKCRRSKGGGQRGG--VVGCVVWGNHSATQVGDVSGCEEAVAMGLVE--------DEAFARTLQQRGKAVIEKRGLSSALSAAMAICDHMRDWVLGS-RGKAVSMGVWSEGNPYGIDPRLVFSFPV 774
            +ARGLMFGP Q+V + L ++   ++ + GV MELED     +  VV + D   AF   D A++ GA PR  GMERKDLL  NA IF EQG+++G   S  C+V+VVGNPANTNA L+  + D ++D R +TALTRLD NR   +         G++ G  V   ++WGNHS TQV DV+    A    L E        D  F   +QQRG A+I+ RGLSSA SAA AI DH+ DW+LG+  G  VSM VWS GNPYG+   L++SFPV
Sbjct:   40 IARGLMFGPEQKVELALLEVEPAQNALRGVAMELEDCAFPTLANVVCTADPRVAFANADVAVMCGAFPRKDGMERKDLLQMNAKIFSEQGKIIGEVASKHCRVVVVGNPANTNALLLALAADGSIDPRQVTALTRLDHNRAIALA--------GRKAGAPVKNAIIWGNHSGTQVPDVNSAVVADGAALREVAKADDYFDGEFIPEVQQRGAAIIKARGLSSAASAAKAIVDHVHDWILGTPEGTFVSMAVWSNGNPYGVPENLIYSFPV 301          
BLAST of mRNA_M-pyrifera_M_contig91793.21256.1 vs. uniprot
Match: A0A812VG83_9DINO (Malate dehydrogenase n=3 Tax=Sar TaxID=2698737 RepID=A0A812VG83_9DINO)

HSP 1 Score: 220 bits (561), Expect = 1.480e-67
Identity = 137/272 (50.37%), Postives = 165/272 (60.66%), Query Frame = 1
Query:    1 LVARGLMFGPSQRVRVHLFDLAAMRDRMEGVRMELEDVGESLVDEVVVSVDAEEAFRGVDYALLVGAKPRGKGMERKDLLVENAAIFVEQGRLLGRF-SPACKVLVVGNPANTNAFLVGASGDALDRRNITALTRLDQNRLEGMVKCRRSKGGGQRGGVVGCVVWGNHSATQVGDVSGCE-------EAVAMGLVE------DEAFARTLQQRGKAVIEKRGLSSALSAAMAICDHMRDWVLGSRGKAVSMGVWSEGNPYGIDPRLVFSFPV 774
            ++ARG +FG  + V + L D+ A  D++  V MEL+DV    V     + D  EAF   D ALLVGA+PRG GM RKDLL  NA IF  QG +L    S  CKV+VVGNPANTNA L   S  +L +RN TALTRLDQNR  GM+    +K G     +   V+WGNHSATQV  V+          E VA  L E       E     +QQRGK VI  RG SSA SAA AICDH+RDWV+GS G+ VSM V S+GNP+G+   L+FSFPV
Sbjct:    1 MIARGGVFG-DRAVDLRLLDIEAASDKLRAVGMELQDVASPFVLRCTCTTDPLEAFMDADVALLVGARPRGPGMLRKDLLAANAGIFKAQGAVLDEVASRDCKVVVVGNPANTNALLCMRSAPSLPKRNFTALTRLDQNRTAGMLA---AKIGVPVSTIRNAVIWGNHSATQVPMVTFATVEEGRAVETVAARLGEGGERWVSEELVPGVQQRGKEVIAARGASSAASAASAICDHIRDWVMGSDGRVVSMAVSSDGNPFGVREGLIFSFPV 268          
BLAST of mRNA_M-pyrifera_M_contig91793.21256.1 vs. uniprot
Match: A0A6P6XR82_DERPT (Malate dehydrogenase n=1 Tax=Dermatophagoides pteronyssinus TaxID=6956 RepID=A0A6P6XR82_DERPT)

HSP 1 Score: 220 bits (561), Expect = 2.370e-67
Identity = 129/265 (48.68%), Postives = 163/265 (61.51%), Query Frame = 1
Query:    1 LVARGLMFGPSQRVRVHLFDLAAMRDRMEGVRMELEDVGESLVDEVVVSVDAEEAFRGVDYALLVGAKPRGKGMERKDLLVENAAIFVEQGRLLGRFS-PACKVLVVGNPANTNAFLVGA-SGDALDRRNITALTRLDQNRLEGMVKCRRSKGGGQRGGVVGCVVWGNHSATQVGDVSGCEEAVAMGLV-----EDEAFARTLQQRGKAVIEKRGLSSALSAAMAICDHMRDWVLGSRGKAVSMGVWSEGNPYGIDPRLVFSFPV 774
            +VARG +FG  Q + +HL D+  M+  ++GV ME+ D    LV  V+ + D  EAF+ +D A LVG+ PR +GMERKDLL  N  IF  QGR L   S P  KVLVVGNPANTNA +    +   +  RNITA+TRLDQNR +  +  R S    Q   +   ++WGNHS+TQ  D+S    A   G        DE F +T+Q+RG AVI  R LSSA+SAA A  DHM DW  GS G  VSMG+ S+GNPYGI   ++FSFPV
Sbjct:   25 IVARGDVFGRQQSIVLHLLDIPPMKTVLDGVVMEINDCSFPLVQSVIATTDEAEAFKNIDAAFLVGSMPRREGMERKDLLAANVKIFASQGRALANHSKPDVKVLVVGNPANTNALIAAKFASPKIPARNITAMTRLDQNRAQYQLAARHSC---QVSKIQRVIIWGNHSSTQFPDIS---NATLDGQPIKFDGHDEKFIQTIQKRGAAVIAARKLSSAMSAAKAAADHMHDWWNGSNGNWVSMGIISDGNPYGIADGIMFSFPV 283          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig91793.21256.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI0004F431157.820e-7249.81cytosolic malate dehydrogenase n=1 Tax=Trypanosoma... [more]
L1JY01_GUITC4.370e-7047.96Malate dehydrogenase n=1 Tax=Guillardia theta (str... [more]
A0A2G6N2D8_9DELT1.970e-6850.00Malate dehydrogenase n=2 Tax=Desulfobacterales Tax... [more]
G0UD31_TRYVY3.830e-6849.25Malate dehydrogenase n=1 Tax=Trypanosoma vivax (st... [more]
UPI001966BFD23.940e-6848.48malate dehydrogenase n=1 Tax=Desulfogranum marinum... [more]
UPI001966B9254.060e-6847.73malate dehydrogenase n=1 Tax=Desulfobulbus rhabdof... [more]
A0A2L1GMP3_9DELT5.740e-6848.86Malate dehydrogenase n=1 Tax=Desulfobulbus oralis ... [more]
A0A7S1MMC8_NEODS6.110e-6847.78Malate dehydrogenase n=1 Tax=Neobodo designis TaxI... [more]
A0A812VG83_9DINO1.480e-6750.37Malate dehydrogenase n=3 Tax=Sar TaxID=2698737 Rep... [more]
A0A6P6XR82_DERPT2.370e-6748.68Malate dehydrogenase n=1 Tax=Dermatophagoides pter... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig91793contigM-pyrifera_M_contig91793:2..775 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score229.2
Seed ortholog evalue2.2e-57
Seed eggNOG ortholog55529.EKX53232
Preferred nameMDH1
KEGG rclassRC00031
KEGG koko:K00024,ko:K00025,ko:K00026
KEGG ReactionR00342,R07136
KEGG Pathwayko00020,ko00270,ko00620,ko00630,ko00680,ko00710,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04964,map00020,map00270,map00620,map00630,map00680,map00710,map00720,map01100,map01110,map01120,map01130,map01200,map04964
KEGG ModuleM00009,M00011,M00012,M00168,M00171,M00173,M00346,M00374,M00620,M00740
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0003674,GO:0003824,GO:0004470,GO:0005488,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005773,GO:0005774,GO:0005777,GO:0005829,GO:0005886,GO:0005911,GO:0005975,GO:0005996,GO:0006006,GO:0006082,GO:0006091,GO:0006094,GO:0006099,GO:0006101,GO:0006107,GO:0006108,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006970,GO:0008150,GO:0008152,GO:0009058,GO:0009060,GO:0009117,GO:0009506,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009628,GO:0009651,GO:0009719,GO:0009725,GO:0009735,GO:0009987,GO:0010033,GO:0010035,GO:0010038,GO:0010043,GO:0015980,GO:0016020,GO:0016051,GO:0016491,GO:0016614,GO:0016615,GO:0016616,GO:0016999,GO:0017144,GO:0019318,GO:0019319,GO:0019362,GO:0019637,GO:0019674,GO:0019752,GO:0030054,GO:0030060,GO:0031090,GO:0034641,GO:0036094,GO:0042221,GO:0042579,GO:0043209,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044281,GO:0044283,GO:0044421,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0045333,GO:0046364,GO:0046483,GO:0046496,GO:0046686,GO:0048037,GO:0048046,GO:0050662,GO:0050896,GO:0051186,GO:0051287,GO:0055044,GO:0055086,GO:0055114,GO:0071704,GO:0071944,GO:0072350,GO:0072524,GO:0097159,GO:0098588,GO:0098805,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901576
EggNOG free text desc.malate metabolic process
EggNOG OGsCOG0039@1,KOG1496@2759
EC1.1.1.37
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons1
Model size774
Cds size756
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816830.6486351-UTR-M-pyrifera_M_contig91793:1..191622816830.6486351-UTR-M-pyrifera_M_contig91793:1..19Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig91793 2..19 +
1692278203.7770202-UTR-M-pyrifera_M_contig91793:1..191692278203.7770202-UTR-M-pyrifera_M_contig91793:1..19Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig91793 2..19 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816830.6638072-CDS-M-pyrifera_M_contig91793:19..7751622816830.6638072-CDS-M-pyrifera_M_contig91793:19..775Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig91793 20..775 +
1692278203.7983541-CDS-M-pyrifera_M_contig91793:19..7751692278203.7983541-CDS-M-pyrifera_M_contig91793:19..775Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig91793 20..775 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig91793.21256.1prot_M-pyrifera_M_contig91793.21256.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig91793 20..775 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig91793.21256.1

>prot_M-pyrifera_M_contig91793.21256.1 ID=prot_M-pyrifera_M_contig91793.21256.1|Name=mRNA_M-pyrifera_M_contig91793.21256.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=252bp
MFGPSQRVRVHLFDLAAMRDRMEGVRMELEDVGESLVDEVVVSVDAEEAF
RGVDYALLVGAKPRGKGMERKDLLVENAAIFVEQGRLLGRFSPACKVLVV
GNPANTNAFLVGASGDALDRRNITALTRLDQNRLEGMVKCRRSKGGGQRG
GVVGCVVWGNHSATQVGDVSGCEEAVAMGLVEDEAFARTLQQRGKAVIEK
RGLSSALSAAMAICDHMRDWVLGSRGKAVSMGVWSEGNPYGIDPRLVFSF
PV
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mRNA from alignment at M-pyrifera_M_contig91793:2..775+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig91793.21256.1 ID=mRNA_M-pyrifera_M_contig91793.21256.1|Name=mRNA_M-pyrifera_M_contig91793.21256.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=774bp|location=Sequence derived from alignment at M-pyrifera_M_contig91793:2..775+ (Macrocystis pyrifera P11B4 male)
CTAGTGGCGCGCGGTCTGATGTTCGGACCGTCGCAGCGCGTGCGTGTGCA CCTGTTCGATCTGGCGGCGATGCGAGATCGCATGGAAGGCGTTCGGATGG AGCTGGAGGATGTAGGGGAATCTTTGGTGGACGAGGTTGTGGTGAGTGTG GATGCGGAGGAGGCCTTTCGAGGGGTCGACTATGCGCTGCTGGTGGGGGC GAAGCCGCGGGGCAAAGGGATGGAGCGGAAGGACCTGTTGGTGGAGAATG CTGCCATTTTCGTGGAGCAAGGAAGGCTTTTGGGTCGATTTTCGCCGGCT TGCAAGGTTTTGGTGGTGGGAAACCCGGCCAATACCAACGCATTTCTGGT GGGCGCGAGTGGGGATGCGTTGGATCGCAGGAACATCACTGCACTGACGA GATTGGATCAAAACCGACTCGAGGGAATGGTAAAGTGCCGGAGGAGCAAG GGTGGTGGGCAGAGAGGGGGGGTGGTGGGGTGCGTGGTGTGGGGCAACCA CAGCGCGACGCAAGTGGGGGACGTGAGCGGGTGTGAGGAGGCCGTGGCGA TGGGGTTGGTGGAGGATGAGGCATTTGCTCGCACGTTGCAGCAGCGAGGA AAGGCCGTGATCGAGAAACGAGGCCTGTCTTCGGCCCTATCTGCAGCAAT GGCCATCTGTGACCACATGCGCGACTGGGTGTTGGGGTCTCGGGGAAAAG CAGTGAGCATGGGTGTGTGGAGCGAGGGCAACCCTTATGGCATCGACCCA CGCCTCGTTTTCTCCTTTCCCGTC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig91793:2..775+

>mRNA_M-pyrifera_M_contig91793.21256.1 ID=mRNA_M-pyrifera_M_contig91793.21256.1|Name=mRNA_M-pyrifera_M_contig91793.21256.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1512bp|location=Sequence derived from alignment at M-pyrifera_M_contig91793:2..775+ (Macrocystis pyrifera P11B4 male)
ATGTTCGGACCGTCGCAGCGCGTGCGTGTGCACCTGTTCGATCTGGCGGC
GATGCGAGATCGCATGGAAGGCGTTCGGATGGAGCTGGAGGATGTAGGGG
AATCTTTGGTGGACGAGGTTGTGGTGAGTGTGGATGCGGAGGAGGCCTTT
CGAGGGGTCGACTATGCGCTGCTGGTGGGGGCGAAGCCGCGGGGCAAAGG
GATGGAGCGGAAGGACCTGTTGGTGGAGAATGCTGCCATTTTCGTGGAGC
AAGGAAGGCTTTTGGGTCGATTTTCGCCGGCTTGCAAGGTTTTGGTGGTG
GGAAACCCGGCCAATACCAACGCATTTCTGGTGGGCGCGAGTGGGGATGC
GTTGGATCGCAGGAACATCACTGCACTGACGAGATTGGATCAAAACCGAC
TCGAGGGAATGGTAAAGTGCCGGAGGAGCAAGGGTGGTGGGCAGAGAGGG
GGGGTGGTGGGGTGCGTGGTGTGGGGCAACCACAGCGCGACGCAAGTGGG
GGACGTGAGCGGGTGTGAGGAGGCCGTGGCGATGGGGTTGGTGGAGGATG
AGGCATTTGCTCGCACGTTGCAGCAGCGAGGAAAGGCCGTGATCGAGAAA
CGAGGCCTGTCTTCGGCCCTATCTGCAGCAATGGCCATCTGTGACCACAT
GCGCGACTGGGTGTTGGGGTCTCGGGGAAAAGCAGTGAGCATGGGTGTGT
GGAGCGAGGGCAACCCTTATGGCATCGACCCACGCCTCGTTTTCTCCTTT
CCCGTCATGTTCGGACCGTCGCAGCGCGTGCGTGTGCACCTGTTCGATCT
GGCGGCGATGCGAGATCGCATGGAAGGCGTTCGGATGGAGCTGGAGGATG
TAGGGGAATCTTTGGTGGACGAGGTTGTGGTGAGTGTGGATGCGGAGGAG
GCCTTTCGAGGGGTCGACTATGCGCTGCTGGTGGGGGCGAAGCCGCGGGG
CAAAGGGATGGAGCGGAAGGACCTGTTGGTGGAGAATGCTGCCATTTTCG
TGGAGCAAGGAAGGCTTTTGGGTCGATTTTCGCCGGCTTGCAAGGTTTTG
GTGGTGGGAAACCCGGCCAATACCAACGCATTTCTGGTGGGCGCGAGTGG
GGATGCGTTGGATCGCAGGAACATCACTGCACTGACGAGATTGGATCAAA
ACCGACTCGAGGGAATGGTAAAGTGCCGGAGGAGCAAGGGTGGTGGGCAG
AGAGGGGGGGTGGTGGGGTGCGTGGTGTGGGGCAACCACAGCGCGACGCA
AGTGGGGGACGTGAGCGGGTGTGAGGAGGCCGTGGCGATGGGGTTGGTGG
AGGATGAGGCATTTGCTCGCACGTTGCAGCAGCGAGGAAAGGCCGTGATC
GAGAAACGAGGCCTGTCTTCGGCCCTATCTGCAGCAATGGCCATCTGTGA
CCACATGCGCGACTGGGTGTTGGGGTCTCGGGGAAAAGCAGTGAGCATGG
GTGTGTGGAGCGAGGGCAACCCTTATGGCATCGACCCACGCCTCGTTTTC
TCCTTTCCCGTC
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