mRNA_M-pyrifera_M_contig91604.21224.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig91604.21224.1 vs. uniprot
Match: E1ZLT2_CHLVA (PolyA_pol domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZLT2_CHLVA) HSP 1 Score: 130 bits (326), Expect = 1.360e-33 Identity = 74/168 (44.05%), Postives = 98/168 (58.33%), Query Frame = 1 Query: 16 SVALTAEEEELFQFLLRVVEHTGSGTTMRVAGGWVRDKLLGKPSNDIDIAVDNLSGKDFRGLIYTYLAEAAELAAAGGSEVDVNGVITARPEKGKHVECTTLRTHGFDLDLLSLRSNAVLNRSTELSACEDVSEEEELLLLAHEDAHLRDFTVSALFYNINTGTVEDF 519 S+ LT EE LF+ LL + G GTT+R AGGWVRDKL+G+ S DIDIA+DNL G++F I +L A G E VI + PE+ KH+E ++ G +DL++LRS + S + E EDAH RDFT+++LFYNINTG +EDF Sbjct: 89 SIELTEEEAALFKELLDATKQAGLGTTLRCAGGWVRDKLMGRTSQDIDIALDNLLGREFADRINEHLK-------AHGEETRHVAVIMSNPEQSKHLETARMKVRGLWIDLVNLRSEEYAHHSRIPTMAFGTPE---------EDAHRRDFTINSLFYNINTGLIEDF 240
BLAST of mRNA_M-pyrifera_M_contig91604.21224.1 vs. uniprot
Match: A0A2P6VSB2_9CHLO (CCA tRNA nucleotidyltransferase 2 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VSB2_9CHLO) HSP 1 Score: 126 bits (317), Expect = 4.330e-33 Identity = 76/174 (43.68%), Postives = 99/174 (56.90%), Query Frame = 1 Query: 1 MPSLH-SVALTAEEEELFQFLLRVVEHTGSGTTMRVAGGWVRDKLLGKPSNDIDIAVDNLSGKDFRGLIYTYLAEAAELAAAGGSEVDVNGVITARPEKGKHVECTTLRTHGFDLDLLSLRSNAVLNRSTELSACEDVSEEEELLLLAHEDAHLRDFTVSALFYNINTGTVEDF 519 MP++ ++ LT EE LFQ LL + G TT+R AGGWVRDKL+G+ S DIDIA+DNL G++F I YL A G E VI + PE+ KH+E ++ G +DL++LRS S + E EDAH RDFT++ LFYNINTG +EDF Sbjct: 1 MPAIKDAIELTDEEHALFQELLDASKQAGLSTTLRCAGGWVRDKLMGRTSLDIDIALDNLLGREFADRINEYLK-------AHGEETHHVAVIMSNPEQSKHLETARMKVRGIWIDLVNLRSEEYALHSRIPTMTFGTPE---------EDAHRRDFTINTLFYNINTGLIEDF 158
BLAST of mRNA_M-pyrifera_M_contig91604.21224.1 vs. uniprot
Match: A0A7R9YLU6_DIALT (Hypothetical protein (Fragment) n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9YLU6_DIALT) HSP 1 Score: 123 bits (308), Expect = 1.580e-32 Identity = 77/169 (45.56%), Postives = 98/169 (57.99%), Query Frame = 1 Query: 19 VALTAEEEELFQFLLRVVEHTGSGTTMRVAGGWVRDKLLGKPSNDIDIAVDNLSGKDFRGLIYTYLAEAAELAAAGGSEVDVNGVITARPEKGKHVECTTLRTHGFDLDLLSLRSNAVLNRSTELSACEDVSEEEELLLLAHEDAHLRDFTVSALFYNINTGTVEDFVG 525 ++LT EEE LF L VV G T RVAGGWVRDKLLGK S DIDIA+D+++G F L+ LAE G E GVI+A PE+ KH+E +LR GF+LD+++LRS + + S + E S DA RD T++ALFYN+ T VED G Sbjct: 9 LSLTREEEALFDLLCDVVARNGLATVPRVAGGWVRDKLLGKASADIDIALDDMTGVAFSELVNARLAEL-------GRETRSLGVISANPEQSKHLETVSLRVLGFELDVVNLRSESYADGSR-IPTVEFGS--------PRADAERRDLTINALFYNLCTRRVEDLCG 161
BLAST of mRNA_M-pyrifera_M_contig91604.21224.1 vs. uniprot
Match: C1N3I9_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1N3I9_MICPC) HSP 1 Score: 131 bits (329), Expect = 3.560e-32 Identity = 80/175 (45.71%), Postives = 103/175 (58.86%), Query Frame = 1 Query: 16 SVALTAEEEELFQFLLRVVEHTGSGTTMRVAGGWVRDKLLGKPSNDIDIAVDNLSGKDFRGLIYTYLAEAAELAAAGGSEVDVNGVITARPEKGKHVECTTLRTHGFDLDLLSLRSNAVLNRSTELSACEDVSEEEELLLL----AHEDAHLRDFTVSALFYNINTGTVEDFVGV 528 +V TAEEE +F LL VVE T+RVAGGWVRDKLLGK S DIDIA+D+L G++F L+ +L E G V GVI + P++ KH+E T+R H LDL++LRS E+ SEE + + A +DA RD T++ALFYNIN VEDF G+ Sbjct: 142 TVTCTAEEERIFATLLEVVEKNDLPVTLRVAGGWVRDKLLGKNSTDIDIAIDSLLGREFAELVNAHLREK-------GETVHGVGVIQSNPDQSKHLETATMRVHDVWLDLVNLRS-------------ENYSEESRIPEMTFGSATDDAFRRDLTINALFYNINLKQVEDFTGM 296
BLAST of mRNA_M-pyrifera_M_contig91604.21224.1 vs. uniprot
Match: A0A7S3IA14_9CILI (Hypothetical protein n=1 Tax=Fabrea salina TaxID=342563 RepID=A0A7S3IA14_9CILI) HSP 1 Score: 129 bits (324), Expect = 3.780e-32 Identity = 74/175 (42.29%), Postives = 97/175 (55.43%), Query Frame = 1 Query: 1 MPSLHSVALTAEEEELFQFLLRVVEHTGSGTTMRVAGGWVRDKLLGKPSNDIDIAVDNLSGKDFRGLIYTYLAEAAELAAAGGSEVDVNGVITARPEKGKHVECTTLRTHGFDLDLLSLRSNAVLNRSTELSACEDVSEEEELLLLAHEDAHLRDFTVSALFYNINTGTVEDFVG 525 +P+ + LT+EE+ FQ L +VVE G GT +RVAGGWVRDKLLG S DIDIA+DN+ G+ F L+ + L G I A P+ KH+E R HG D+D ++LRS CED + EDAH RD T+++LFYNI+ T+EDF G Sbjct: 19 VPAQGKIHLTSEEQRFFQDLKQVVEKKGCGTELRVAGGWVRDKLLGLLSTDIDIALDNMMGEPFARLVMESIPSIRGL-----------GTIKANPQASKHLETACARIHGLDIDFVNLRSE---------DYCEDSRIPSMQIGTPSEDAHRRDLTINSLFYNIHKDTIEDFTG 173
BLAST of mRNA_M-pyrifera_M_contig91604.21224.1 vs. uniprot
Match: A0A067H830_CITSI (PolyA_pol domain-containing protein (Fragment) n=1 Tax=Citrus sinensis TaxID=2711 RepID=A0A067H830_CITSI) HSP 1 Score: 124 bits (310), Expect = 9.150e-32 Identity = 70/173 (40.46%), Postives = 98/173 (56.65%), Query Frame = 1 Query: 19 VALTAEEEELFQFLLRVVEHTGSGTTMRVAGGWVRDKLLGKPSNDIDIAVDNLSGKDFRGLIYTYLAEAAELAAAGGSEVDVNGVITARPEKGKHVECTTLRTHGFDLDLLSLRSNAVLNRSTELSACEDVSEEEELLLL----AHEDAHLRDFTVSALFYNINTGTVEDFVG 525 + LT E ++F LL + H T +RVAGGWVRDKLLGK DIDIA+DN+ G +F + YL+ E A +G GVI + P++ KH+E T++ + +D ++LR CED SE + + A EDA+ RD T+++LFYNINT +VED G Sbjct: 70 IELTDTETKIFSCLLNTLRHFNLETVLRVAGGWVRDKLLGKDCYDIDIALDNMMGSEFATKVAEYLSATGETAPSGF------GVIPSNPDQSKHLETATMKLYDLWIDFVNLR-------------CEDYSENSRIPTMRFGTAEEDAYRRDLTINSLFYNINTSSVEDLTG 223
BLAST of mRNA_M-pyrifera_M_contig91604.21224.1 vs. uniprot
Match: A0A7S3ISR6_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidium inclinatum TaxID=197538 RepID=A0A7S3ISR6_9SPIT) HSP 1 Score: 121 bits (303), Expect = 9.470e-32 Identity = 71/178 (39.89%), Postives = 103/178 (57.87%), Query Frame = 1 Query: 19 VALTAEEEELFQFLLRVVEHTGSGTTMRVAGGWVRDKLLGKPSNDIDIAVDNLSGKDFRGLIYTYLAEAAELAAAGGSEVDVN-----GVITARPEKGKHVECTTLRTHGFDLDLLSLRSNAVLNRSTELSACEDVSEEEELLLL----AHEDAHLRDFTVSALFYNINTGTVEDFVG 525 + LT +E ++F FLL V++ G TT+RVAGGWVRDKL+GK S+DIDIA+D++ G+DF +I L E ++AA D GVI + EK KH+E +R G +DL++LRS E+ E+ + ++ +DA RD T ++LF+NIN +EDF G Sbjct: 2 IVLTDKENKIFNFLLEVLKENGKTTTLRVAGGWVRDKLMGKESDDIDIALDDMFGEDFAAMIRAKLFE-MDVAAGKADPNDKEKGKKYGVIKSNSEKSKHLETAVIRVFGESIDLVNLRS-------------EEYGEDSRVPIIDIGTPEQDAFRRDLTFNSLFFNINEQVIEDFTG 165
BLAST of mRNA_M-pyrifera_M_contig91604.21224.1 vs. uniprot
Match: A0A2V0NUI1_9CHLO (PolyA_pol domain-containing protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0NUI1_9CHLO) HSP 1 Score: 129 bits (323), Expect = 1.320e-31 Identity = 73/169 (43.20%), Postives = 99/169 (58.58%), Query Frame = 1 Query: 19 VALTAEEEELFQFLLRVVEHTGSGTTMRVAGGWVRDKLLGKPSNDIDIAVDNLSGKDFRGLIYTYLAEAAELAAAGGSEVDVNGVITARPEKGKHVECTTLRTHGFDLDLLSLRSNAVLNRSTELSACEDVSEEEELLLLAHEDAHLRDFTVSALFYNINTGTVEDFVG 525 ++LTAEE+ELF LL H G+GTT+R AGGWVRDKLLG S DID+A+DN+ G++F + YL + G E VI + PE+ KH+E ++ + +DL++LRS S + + E L +DA RDFTV+ALFYN+N G VED G Sbjct: 8 ISLTAEEQELFSLLLEAANHAGTGTTLRCAGGWVRDKLLGLESKDIDVALDNMLGREFADKVNDYLQ-------SQGKETHKAAVIHSNPEQSKHLETARMKVNDLWIDLVNLRSETYAEGSR-------IPKMEFGTPL--QDAERRDFTVNALFYNLNAGAVEDLTG 160
BLAST of mRNA_M-pyrifera_M_contig91604.21224.1 vs. uniprot
Match: C1E3J8_MICCC (Uncharacterized protein n=3 Tax=Micromonas TaxID=38832 RepID=C1E3J8_MICCC) HSP 1 Score: 129 bits (323), Expect = 2.260e-31 Identity = 77/171 (45.03%), Postives = 103/171 (60.23%), Query Frame = 1 Query: 16 SVALTAEEEELFQFLLRVVEHTGSGTTMRVAGGWVRDKLLGKPSNDIDIAVDNLSGKDFRGLIYTYLAEAAELAAAGGSEVDVNGVITARPEKGKHVECTTLRTHGFDLDLLSLRSNAVLNRSTELSACEDVSEEEELLLLAHEDAHLRDFTVSALFYNINTGTVEDFVGV 528 +V TAEEE++F LL VV+ T+RVAGGWVRDKLLGK S+DIDIA+D + G++F + YL E G E GVI + P++ KH+E T+R HG LDL++LRS TE S ++ A +DA+ RD T+++LFYNIN VEDF G+ Sbjct: 145 TVVCTAEEEKIFGTLLDVVKRYELPVTLRVAGGWVRDKLLGKHSSDIDIALDTMMGEEFAAKVNEYLQEK-------GEETHGVGVIQSNPDQSKHLETATMRVHGQWLDLVNLRSEEY----TEASRIPEMK-----FGSATDDAYRRDLTINSLFYNINLRCVEDFTGM 299
BLAST of mRNA_M-pyrifera_M_contig91604.21224.1 vs. uniprot
Match: A0A482RUG9_9ARCH (PolyA_pol domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RUG9_9ARCH) HSP 1 Score: 119 bits (299), Expect = 2.470e-31 Identity = 71/167 (42.51%), Postives = 97/167 (58.08%), Query Frame = 1 Query: 10 LHSVALTAEEEELFQFLLRVVEHTGSGTTMRVAGGWVRDKLLGKPSNDIDIAVDNLSGKDFRGLIYTYLAEAAELAAAGGSEVDVNGVITARPEKGKHVECTTLRTHGFDLDLLSLRSNAVLNRSTELSACEDVSEEEELLLLAHEDAHLRDFTVSALFYNINTGTV 510 ++ + LT EE +LFQ LL + H TT+RVAGGWVRDKLLGK S DIDIA+D+ SG +F L+ +LA G EV VI A P++ KH+E L+ GF+LD ++LR+ + + + L EDA RDFT++ALF+NI+T V Sbjct: 1 MYDIHLTTEEGDLFQLLLDCLSHFHKNTTIRVAGGWVRDKLLGKVSQDIDIALDDQSGLEFANLVNQFLA-------LKGLEVRTIAVIQANPDQSKHLETANLKVLGFELDCVNLRAESYADSRIPIIR----------LGTPLEDALRRDFTINALFFNIHTRQV 150 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig91604.21224.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig91604.21224.1 >prot_M-pyrifera_M_contig91604.21224.1 ID=prot_M-pyrifera_M_contig91604.21224.1|Name=mRNA_M-pyrifera_M_contig91604.21224.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=176bp MPSLHSVALTAEEEELFQFLLRVVEHTGSGTTMRVAGGWVRDKLLGKPSNback to top mRNA from alignment at M-pyrifera_M_contig91604:45..731+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig91604.21224.1 ID=mRNA_M-pyrifera_M_contig91604.21224.1|Name=mRNA_M-pyrifera_M_contig91604.21224.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=687bp|location=Sequence derived from alignment at M-pyrifera_M_contig91604:45..731+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig91604:45..731+ >mRNA_M-pyrifera_M_contig91604.21224.1 ID=mRNA_M-pyrifera_M_contig91604.21224.1|Name=mRNA_M-pyrifera_M_contig91604.21224.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1056bp|location=Sequence derived from alignment at M-pyrifera_M_contig91604:45..731+ (Macrocystis pyrifera P11B4 male)back to top |