mRNA_M-pyrifera_M_contig90748.21032.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig90748.21032.1
Unique NamemRNA_M-pyrifera_M_contig90748.21032.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig90748.21032.1 vs. uniprot
Match: A0A2D6HCQ0_9BACT (VWFA domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D6HCQ0_9BACT)

HSP 1 Score: 300 bits (767), Expect = 9.180e-92
Identity = 156/262 (59.54%), Postives = 189/262 (72.14%), Query Frame = 1
Query:    1 LMNELYPSDQIAIITFSNDAKRVFTMQPIANRSAIEQALYDMRPDGGTNAEAGLLKGYEEAVLGFTEGAVNRVVFLSDGVGNIGETNEQQLLDEVKRARDKGIYLNTVGVGMGNHNDRFLEQLANGGDGLCNYVDGPAEAERALVTNFTSAMQPIARDVKLQVEFDPSQVIAYRLLGYENRAIADADFRNDKVDAGELGSGHQVVALYELVLGDVDTSGERPLVTTRVRHKVPHGEREQGAEDKATEAAFTGSWSHATGTFD 786
            L+ +L   D IA++ FSN+A+ V  M   ANR  IE A++ + PDGGTNA+AG+  G+E AV   T  A NRVVFLSDGV NIGET++ ++ + V   R+KGIYLNTVGVG+GNHND FLEQLA+ GDG+CNYVD P E +RALV NFT A +PIARDVK+QVEFDP  V  +RLLGYENRAIAD DFRND VDAGE+G+GHQ+VALYEL L DV  + + PL T R+R K P G      ED ATE     +WS  T TF+
Sbjct:  568 LVGQLDGRDAIALVAFSNEARLVLPMTSAANRGVIEAAVFGLHPDGGTNADAGIRLGFELAVNELTLEANNRVVFLSDGVANIGETDQGRIAEAVGAHREKGIYLNTVGVGLGNHNDVFLEQLADRGDGICNYVDSPEEVQRALVDNFTGAFEPIARDVKVQVEFDPRFVHRWRLLGYENRAIADVDFRNDSVDAGEVGAGHQIVALYELDLNDVPAAADPPLATVRLRWKRPSGPERDPLEDSATEIETNVNWSSRT-TFE 828          
BLAST of mRNA_M-pyrifera_M_contig90748.21032.1 vs. uniprot
Match: A0A523PEI8_9BACT (DUF3520 domain-containing protein (Fragment) n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A523PEI8_9BACT)

HSP 1 Score: 276 bits (705), Expect = 1.390e-82
Identity = 144/261 (55.17%), Postives = 177/261 (67.82%), Query Frame = 1
Query:    1 LMNELYPSDQIAIITFSNDAKRVFTMQPIANRSAIEQALYDMRPDGGTNAEAGLLKGYEEAVLGFTEGAVNRVVFLSDGVGNIGETNEQQLLDEVKRARDKGIYLNTVGVGMGNHNDRFLEQLANGGDGLCNYVDGPAEAERALVTNFTSAMQPIARDVKLQVEFDPSQVIAYRLLGYENRAIADADFRNDKVDAGELGSGHQVVALYELVLGDVDTSGERPLVTTRVRHKVPHGEREQGAEDKATEAAFTGSWSHATGTF 783
            L+ +L   D +A++ FS +A+ +  M   A R  IE A+Y + P GGTNAEAGL  GYE A+     G  NRVVFLSDGV NIG+T++ +L  +V+R R++GIYLNT+GVGMGNHND FLEQLA+ GDG+C+Y D    A RA+V  FT A +PIA DVK+QVEFDP QV  YRLLGYENRAIAD DFRND VDAGE+G+GHQ+VALYEL        G  PL T R+R K P   R+  +E   TE   T     A G+F
Sbjct:  608 LLGQLDARDSVAVVAFSREARLILPMTSAAQRGLIESAIYPLSPSGGTNAEAGLKMGYEVALAALASGVHNRVVFLSDGVANIGQTDQDRLNADVQRHREQGIYLNTIGVGMGNHNDVFLEQLADKGDGICDYFDDAEAARRAIVDRFTGAFEPIASDVKIQVEFDPIQVHRYRLLGYENRAIADQDFRNDAVDAGEVGAGHQIVALYELERTSAAADG--PLATVRLRWKAPKVARQDPSEVDVTEIEHTVLPRDAAGSF 866          
BLAST of mRNA_M-pyrifera_M_contig90748.21032.1 vs. uniprot
Match: A0A800G530_9BACT (DUF3520 domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A800G530_9BACT)

HSP 1 Score: 266 bits (680), Expect = 3.110e-79
Identity = 137/256 (53.52%), Postives = 177/256 (69.14%), Query Frame = 1
Query:    1 LMNELYPSDQIAIITFSNDAKRVFTMQPIANRSAIEQALYDMRPDGGTNAEAGLLKGYEEAVLGFTEGAVNRVVFLSDGVGNIGETNEQQLLDEVKRARDKGIYLNTVGVGMGNHNDRFLEQLANGGDGLCNYVDGPAEAERALVTNFTSAMQPIARDVKLQVEFDPSQVIAYRLLGYENRAIADADFRNDKVDAGELGSGHQVVALYELVL-----GDVDTSGERPLVTTRVRHKVPHGEREQGAEDKATEAAFT 753
            L+ +L+  D++ ++ +S +A+ V  M   + R  IE AL+ + P+GGTNAEAGL   YE A+      A +RV+ LSDGV NIG T++ ++  +V R R+ GIYLNT+GVGM NHND FLEQLAN GDG+C+YVD  A A RA+V  FT A+ PIA DVK+QVEFDP+QV +YRLLGYENRA+ADADFRND VDAGE+G+GHQVVALYEL +      D+    E  L T R+R K P   R+   E + TE + T
Sbjct:  554 LVGQLHEGDKVGLVAYSREARMVLPMTDASERGLIESALHPLSPNGGTNAEAGLKMAYELALTSLDPAAHSRVILLSDGVANIGTTDQDRINQDVTRHREAGIYLNTIGVGMNNHNDVFLEQLANKGDGICDYVDDEAAARRAIVERFTGALIPIAGDVKIQVEFDPTQVHSYRLLGYENRAVADADFRNDAVDAGEIGAGHQVVALYELDMVPGESPDIIDVEEGSLATVRLRWKAPKAARQHPLEVEVTEISAT 809          
BLAST of mRNA_M-pyrifera_M_contig90748.21032.1 vs. uniprot
Match: A0A2D6QG03_9ARCH (VWFA domain-containing protein n=2 Tax=cellular organisms TaxID=131567 RepID=A0A2D6QG03_9ARCH)

HSP 1 Score: 261 bits (668), Expect = 1.850e-77
Identity = 140/266 (52.63%), Postives = 178/266 (66.92%), Query Frame = 1
Query:    1 LMNELYPSDQIAIITFSNDAKRVFTMQPIANRSAIEQALYDMRPDGGTNAEAGLLKGYEEAVLGFTEGAVNRVVFLSDGVGNIGETNEQQLLDEVKRARDKGIYLNTVGVGMGNHNDRFLEQLANGGDGLCNYVDGPAEAERALVTNFTSAMQPIARDVKLQVEFDPSQVIAYRLLGYENRAIADADFRNDKVDAGELGSGHQVVALYEL--VLGD---VDTSGER------------PLVTTRVRHKVPHGEREQGAEDKATEAA 747
            L+ +L   D++ ++ +S +A+ V  M   + R  IE AL+ + P+GGTNAEAGL   YE A+      A +RV+ LSDGV NIG T++ ++  +V R RD GIYLNT+GVGM NHND FLEQLAN GDG+C+YVD  A A RA+V  FT A+ PIA DVK+QVEFDP+QV +YRLLGYENRA+ADADFRND VDAGE+G+GHQVVALYEL  V G+   +  S ER            PL T R+R K P    +   E + TE +
Sbjct:  553 LVGQLNEGDKVGLVAYSREARMVLPMTDASERGLIESALHPLSPNGGTNAEAGLKMAYELALTALDSAAHSRVILLSDGVANIGTTDQDRINRDVTRHRDAGIYLNTIGVGMNNHNDVFLEQLANKGDGICDYVDDEAAARRAIVERFTGALIPIAGDVKIQVEFDPAQVHSYRLLGYENRAVADADFRNDAVDAGEIGAGHQVVALYELDRVSGESSVIHRSSERTFVAQSPKAEEGPLATIRLRWKAPKAAHQHPLEVEVTETS 818          
BLAST of mRNA_M-pyrifera_M_contig90748.21032.1 vs. uniprot
Match: A0A7Y4WI36_9BACT (DUF3520 domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7Y4WI36_9BACT)

HSP 1 Score: 261 bits (666), Expect = 2.420e-77
Identity = 143/245 (58.37%), Postives = 170/245 (69.39%), Query Frame = 1
Query:    1 LMNELYPSDQIAIITFSNDAKRVFTMQPIANRSAIEQALYDMRPDGGTNAEAGLLKGYEEAVLGFTEGAVNRVVFLSDGVGNIGETNEQQLLDEVKRARDKGIYLNTVGVGMGNHNDRFLEQLANGGDGLCNYVDGPAEAERALVTNFTSAMQPIARDVKLQVEFDPSQVIAYRLLGYENRAIADADFRNDKVDAGELGSGHQVVALYELVLGDVDTSGERPLVTTRVRHKVPHGEREQGAEDKA 735
            L+ +LY +D +AI+ FSNDA  V     +A R  +E  +  M  DGGTN EAGL  GYE AV      AVNRV+  SDGVGNIGET+   LL  VK AR +GIYLNTVGVGMGNHND FLEQLA+ GDG+CNYVD  AEA+R  V    SA+QPIARDVK+QVE DP+QV ++RLLGYENRA+ +  FR+D +DAGE+ +GHQV ALYELV      SG  PL T RVR+K P    +QG E  A
Sbjct:  505 LLRQLYAADSVAIVKFSNDAAVVTPPLALARRGELEAMIQSMATDGGTNVEAGLRLGYELAVQNLQRNAVNRVILCSDGVGNIGETSSAGLLALVKDARPQGIYLNTVGVGMGNHNDAFLEQLADQGDGVCNYVDSDAEAKRVFVDGLASALQPIARDVKIQVELDPNQVESWRLLGYENRALENRMFRDDAIDAGEVNAGHQVSALYELVR-QPGRSG--PLATVRVRYKPPFA-IDQGKEGAA 745          
BLAST of mRNA_M-pyrifera_M_contig90748.21032.1 vs. uniprot
Match: A0A2E5X4N0_9BACT (VWFA domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2E5X4N0_9BACT)

HSP 1 Score: 258 bits (660), Expect = 2.590e-77
Identity = 139/249 (55.82%), Postives = 169/249 (67.87%), Query Frame = 1
Query:    1 LMNELYPSDQIAIITFSNDAKRVFTMQPIANRSAIEQALYDMRPDGGTNAEAGLLKGYEEAVLGFTEGAVNRVVFLSDGVGNIGETNEQQLLDEVKRARDKGIYLNTVGVGMGNHNDRFLEQLANGGDGLCNYVDGPAEAERALVTNFTSAMQPIARDVKLQVEFDPSQVIAYRLLGYENRAIADADFRNDKVDAGELGSGHQVVALYELVLGDVDTSGERPLVTTRVRHKVPHGEREQGAEDKATEAA 747
            L+  L   D ++I++F+ +A  V       NR  IE AL  + P GGTNAE GLLKGY  A+      A NRVVFLSDG+ N+G+T++ ++  EVK  R++GI LNT+GVGMG  ND FLEQLA+ GDG+CNY+D P EA RALV NFT A + IARDVK+QVEFD  QV  YRLLGYENRAIADADFRND VDAGE+G+GHQVVALYE+        G  PL T  +R K P    + G E + TE A
Sbjct:  414 LLMRLEGIDTVSIVSFNKEAHEVLPRTSALNRGIIENALLSLSPGGGTNAENGLLKGYAVALATLDPQASNRVVFLSDGIANMGQTDQDRINGEVKNFREQGILLNTIGVGMGGVNDNFLEQLADKGDGVCNYIDSPKEARRALVENFTGAFEAIARDVKIQVEFDELQVSRYRLLGYENRAIADADFRNDAVDAGEVGAGHQVVALYEVERSSGFAPG--PLATVNLRWKAPKDAGDTGPE-RLTEIA 659          
BLAST of mRNA_M-pyrifera_M_contig90748.21032.1 vs. uniprot
Match: A0A7Y5UU96_9PLAN (von Willebrand factor type A domain-containing protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A7Y5UU96_9PLAN)

HSP 1 Score: 256 bits (655), Expect = 8.350e-76
Identity = 134/247 (54.25%), Postives = 168/247 (68.02%), Query Frame = 1
Query:    1 LMNELYPSDQIAIITFSNDAKRVFTMQPIANRSAIEQALYDMRPDGGTNAEAGLLKGYEEAVLGFTEGAVNRVVFLSDGVGNIGETNEQQLLDEVKRARDKGIYLNTVGVGMGNHNDRFLEQLANGGDGLCNYVDGPAEAERALVTNFTSAMQPIARDVKLQVEFDPSQVIAYRLLGYENRAIADADFRNDKVDAGELGSGHQVVALYELVLGDVDTSGERPLVTTRVRHKVPHGEREQGAEDKATE 741
            L+ +L  +D I+I+ FSNDA  V       +R  IE A++ ++P+G TN E+GL  GY +A    T+ A NRVV L+DGV N+G T+   L+  V+ +R +G+ LNT+GVGM NHND  LEQLA+ GDGLCNYVD  AE  RALV NFT A Q IARD KLQVEFDP+QV  YRLLGYENRA+ADADFRN K+DA E+G+GHQVVALYE+V      + + PL   RVR K P+      AE   +E
Sbjct:  496 LVGQLDSNDTISIVKFSNDAAVVLPPTSARHRDLIESAIHPLQPEGSTNTESGLRMGYAQASAALTKNAQNRVVLLTDGVANVGITDPNALVALVETSRRQGVMLNTIGVGMDNHNDNLLEQLADKGDGLCNYVDDEAEVRRALVDNFTGAFQAIARDAKLQVEFDPAQVERYRLLGYENRAVADADFRNAKIDAAEIGAGHQVVALYEIVRTPT-RNADGPLAVARVRWKAPYANGVADAESNESE 741          
BLAST of mRNA_M-pyrifera_M_contig90748.21032.1 vs. uniprot
Match: A0A518BSI3_9BACT (von Willebrand factor n=1 Tax=Planctomycetes bacterium Pla133 TaxID=2528011 RepID=A0A518BSI3_9BACT)

HSP 1 Score: 251 bits (640), Expect = 9.670e-73
Identity = 143/275 (52.00%), Postives = 176/275 (64.00%), Query Frame = 1
Query:    1 LMNELYPSDQIAIITFSNDAKRVFTMQPIANRSAIEQALYDMRPDGGTNAEAGLLKGYEEAVLGFTEGAV-----NRVVFLSDGVGNIGETNEQQLLDEVKRARDKGIYLNTVGVGMGNHNDRFLEQLANGGDGLCNYVDGPAEAERALVTNFTSAMQPIARDVKLQVEFDPSQVIAYRLLGYENRAIADADFRNDKVDAGELGSGHQVVALYELVLGDVDTSGERPLVTTRVRHKVPHGER--------EQGAEDKATEAAFTGSWSHATGTFD 786
            L+ +L   D + I+ F+N ++ +      ANR  IE A+  M  DGGTN +AGLL GY  A  G           +RVV LSDGVGNIGET++  LL++V  AR  G+YLNT+GVGMGNHND FLEQLA+ GDG+CNYVD P EA +ALV NFT A + IARDVK+QVEFDP++V +YRLLGYENRA+A+ +FR D VDAGE+G+GH VVALYEL    +   G   L T RVR K P            E  A+D A E     S S AT  F+
Sbjct:  798 LLTKLDSRDAVTIVGFANVSRVILPRTSAANRGVIEAAILSMAADGGTNVQAGLLDGYRLAAEGVAAAGAGSQTNHRVVLLSDGVGNIGETDQNALLEQVAGARATGVYLNTIGVGMGNHNDVFLEQLADRGDGICNYVDTPLEARKALVENFTGAFETIARDVKIQVEFDPTRVASYRLLGYENRALANREFRQDDVDAGEVGAGHVVVALYELDGVRLSDDGGA-LATVRVRFKPPFESGVDRTADAYEPPADDVAREIEAQVSGSAATWAFE 1071          
BLAST of mRNA_M-pyrifera_M_contig90748.21032.1 vs. uniprot
Match: A0A2D5W968_9BACT (VWFA domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5W968_9BACT)

HSP 1 Score: 248 bits (632), Expect = 1.340e-72
Identity = 129/241 (53.53%), Postives = 163/241 (67.63%), Query Frame = 1
Query:    1 LMNELYPSDQIAIITFSNDAKRVFTMQPIANRSAIEQALYDMRPDGGTNAEAGLLKGYEEAVLGFTEGAVNRVVFLSDGVGNIGETNEQQLLDEVKRARDKGIYLNTVGVGMGNHNDRFLEQLANGGDGLCNYVDGPAEAERALVTNFTSAMQPIARDVKLQVEFDPSQVIAYRLLGYENRAIADADFRNDKVDAGELGSGHQVVALYELVLGDVDTSGERPLVTTRVRHKVPHGEREQGA 723
            L+  L   D ++I++F+ +A  V       +R  IE AL  + P GGT+AE GL KG+  A+      A NRVVFLSDG+ N+G+T++ ++  ++   R++GI LNT+GVGMG  ND FLEQLA+ GDG+CNY+D P EA RALV NFT   + IARDVK+QVEFD  QV  YRLLGYENRAIADADFRND VDAGE+G+GHQVVALYEL L     +G   L T  +R K P    + GA
Sbjct:  524 LLQRLEGIDSVSIVSFNKEANEVLPRTSAVHRGLIENALLALSPGGGTDAEKGLKKGFSVALANLDSQASNRVVFLSDGMANMGQTDQDRINADISSYREQGILLNTIGVGMGGVNDNFLEQLADKGDGVCNYIDSPKEARRALVENFTGTFEAIARDVKIQVEFDALQVKRYRLLGYENRAIADADFRNDAVDAGEVGAGHQVVALYELELPSGSPAGA--LATVNLRWKTPKDAGDTGA 762          
BLAST of mRNA_M-pyrifera_M_contig90748.21032.1 vs. uniprot
Match: A0A521KJ12_9BACT (DUF3520 domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A521KJ12_9BACT)

HSP 1 Score: 241 bits (616), Expect = 1.270e-70
Identity = 125/229 (54.59%), Postives = 160/229 (69.87%), Query Frame = 1
Query:    1 LMNELYPSDQIAIITFSNDAKRVFTMQPIANRSAIEQALYDMRPDGGTNAEAGLLKGYEEAVLGFTEGAVNRVVFLSDGVGNIGETNEQQLLDEVKRARDKGIYLNTVGVGMGNHNDRFLEQLANGGDGLCNYVDGPAEAERALVTNFTSAMQPIARDVKLQVEFDPSQVIAYRLLGYENRAIADADFRNDKVDAGELGSGHQVVALYELVLGDVDTSGERPLVTTRVR 687
            L  EL+ +D ++++TFS +A+ V     +ANR+A+E AL ++ PDGGTNAEAGL+ GY +A       A NRVV  SDGV NIG T +  L + VK +R+KGI LNT+GVGMGN ND  LEQLA+ GDG+C YVD   EA++ +V   T  ++ IARDVKLQVEFDP+ V+ +R +GYENRA+ADADFRNDKVDAGE  +G Q  ALYEL LG     G+  + T R R
Sbjct:  458 LAGELFATDTVSLVTFSTEARVVLPPTAMANRAALESALSELSPDGGTNAEAGLVLGYAQAEAMLDPQANNRVVLCSDGVANIGATEQGALSERVKASREKGILLNTIGVGMGNLNDALLEQLADRGDGVCRYVDSAQEAKKVMVDELTGTLETIARDVKLQVEFDPAYVLRWRQVGYENRAVADADFRNDKVDAGEAQAGRQTTALYELDLGGA-IDGDPVIGTLRAR 685          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig90748.21032.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2D6HCQ0_9BACT9.180e-9259.54VWFA domain-containing protein n=1 Tax=Planctomyce... [more]
A0A523PEI8_9BACT1.390e-8255.17DUF3520 domain-containing protein (Fragment) n=1 T... [more]
A0A800G530_9BACT3.110e-7953.52DUF3520 domain-containing protein n=1 Tax=Planctom... [more]
A0A2D6QG03_9ARCH1.850e-7752.63VWFA domain-containing protein n=2 Tax=cellular or... [more]
A0A7Y4WI36_9BACT2.420e-7758.37DUF3520 domain-containing protein n=1 Tax=Planctom... [more]
A0A2E5X4N0_9BACT2.590e-7755.82VWFA domain-containing protein n=1 Tax=Planctomyce... [more]
A0A7Y5UU96_9PLAN8.350e-7654.25von Willebrand factor type A domain-containing pro... [more]
A0A518BSI3_9BACT9.670e-7352.00von Willebrand factor n=1 Tax=Planctomycetes bacte... [more]
A0A2D5W968_9BACT1.340e-7253.53VWFA domain-containing protein n=1 Tax=Planctomyce... [more]
A0A521KJ12_9BACT1.270e-7054.59DUF3520 domain-containing protein n=1 Tax=Planctom... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig90748contigM-pyrifera_M_contig90748:2..787 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score218.4
Seed ortholog evalue4e-54
Seed eggNOG ortholog1200792.AKYF01000022_gene5494
KEGG koko:K07114
KEGG TC1.A.13.2.2,1.A.13.2.3
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Domain of unknown function (DUF3520)
EggNOG OGs1TSU7@1239,4HPXN@91061,COG2304@1,COG2304@2
COG Functional cat.S
Best tax levelBacilli
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000
Exons1
Model size786
Cds size783
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816819.3994648-UTR-M-pyrifera_M_contig90748:1..41622816819.3994648-UTR-M-pyrifera_M_contig90748:1..4Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig90748 2..4 +
1692278197.107227-UTR-M-pyrifera_M_contig90748:1..41692278197.107227-UTR-M-pyrifera_M_contig90748:1..4Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig90748 2..4 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816819.4119048-CDS-M-pyrifera_M_contig90748:4..7871622816819.4119048-CDS-M-pyrifera_M_contig90748:4..787Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig90748 5..787 +
1692278197.1262586-CDS-M-pyrifera_M_contig90748:4..7871692278197.1262586-CDS-M-pyrifera_M_contig90748:4..787Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig90748 5..787 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig90748.21032.1prot_M-pyrifera_M_contig90748.21032.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig90748 5..787 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig90748.21032.1

>prot_M-pyrifera_M_contig90748.21032.1 ID=prot_M-pyrifera_M_contig90748.21032.1|Name=mRNA_M-pyrifera_M_contig90748.21032.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=261bp
MNELYPSDQIAIITFSNDAKRVFTMQPIANRSAIEQALYDMRPDGGTNAE
AGLLKGYEEAVLGFTEGAVNRVVFLSDGVGNIGETNEQQLLDEVKRARDK
GIYLNTVGVGMGNHNDRFLEQLANGGDGLCNYVDGPAEAERALVTNFTSA
MQPIARDVKLQVEFDPSQVIAYRLLGYENRAIADADFRNDKVDAGELGSG
HQVVALYELVLGDVDTSGERPLVTTRVRHKVPHGEREQGAEDKATEAAFT
GSWSHATGTFD
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mRNA from alignment at M-pyrifera_M_contig90748:2..787+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig90748.21032.1 ID=mRNA_M-pyrifera_M_contig90748.21032.1|Name=mRNA_M-pyrifera_M_contig90748.21032.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=786bp|location=Sequence derived from alignment at M-pyrifera_M_contig90748:2..787+ (Macrocystis pyrifera P11B4 male)
CTGATGAACGAGCTCTACCCCAGCGACCAGATCGCGATCATCACGTTCTC GAACGACGCCAAGCGCGTCTTCACGATGCAGCCGATCGCGAACCGCTCGG CCATCGAGCAGGCGCTCTATGACATGCGTCCGGATGGCGGCACGAACGCC GAGGCGGGCCTGCTCAAGGGCTATGAAGAGGCCGTGCTGGGCTTCACCGA AGGCGCCGTCAACCGCGTCGTGTTCCTCAGCGACGGCGTCGGCAACATCG GCGAGACCAACGAGCAGCAGCTCCTGGACGAAGTGAAGCGCGCCCGCGAC AAGGGCATCTACCTCAACACGGTGGGGGTTGGCATGGGCAACCACAACGA CCGCTTCCTCGAGCAGCTCGCCAACGGCGGCGACGGGCTCTGCAACTACG TCGACGGCCCGGCGGAGGCCGAGCGCGCGCTGGTCACGAACTTCACCAGC GCGATGCAGCCGATCGCCCGCGACGTGAAACTGCAGGTCGAGTTCGATCC CAGCCAGGTCATCGCCTATCGCCTGCTCGGCTACGAGAACCGCGCGATCG CCGACGCCGACTTCCGCAACGACAAGGTCGACGCGGGCGAGCTGGGCAGC GGCCACCAGGTCGTCGCGCTCTACGAGCTGGTGCTTGGCGACGTCGACAC GAGCGGCGAGCGTCCGCTGGTGACCACCCGCGTGCGCCACAAGGTGCCGC ACGGTGAGCGCGAGCAAGGCGCCGAGGACAAGGCCACCGAGGCCGCGTTC ACCGGCTCGTGGAGCCACGCGACCGGCACCTTCGAC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig90748:2..787+

>mRNA_M-pyrifera_M_contig90748.21032.1 ID=mRNA_M-pyrifera_M_contig90748.21032.1|Name=mRNA_M-pyrifera_M_contig90748.21032.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1566bp|location=Sequence derived from alignment at M-pyrifera_M_contig90748:2..787+ (Macrocystis pyrifera P11B4 male)
ATGAACGAGCTCTACCCCAGCGACCAGATCGCGATCATCACGTTCTCGAA
CGACGCCAAGCGCGTCTTCACGATGCAGCCGATCGCGAACCGCTCGGCCA
TCGAGCAGGCGCTCTATGACATGCGTCCGGATGGCGGCACGAACGCCGAG
GCGGGCCTGCTCAAGGGCTATGAAGAGGCCGTGCTGGGCTTCACCGAAGG
CGCCGTCAACCGCGTCGTGTTCCTCAGCGACGGCGTCGGCAACATCGGCG
AGACCAACGAGCAGCAGCTCCTGGACGAAGTGAAGCGCGCCCGCGACAAG
GGCATCTACCTCAACACGGTGGGGGTTGGCATGGGCAACCACAACGACCG
CTTCCTCGAGCAGCTCGCCAACGGCGGCGACGGGCTCTGCAACTACGTCG
ACGGCCCGGCGGAGGCCGAGCGCGCGCTGGTCACGAACTTCACCAGCGCG
ATGCAGCCGATCGCCCGCGACGTGAAACTGCAGGTCGAGTTCGATCCCAG
CCAGGTCATCGCCTATCGCCTGCTCGGCTACGAGAACCGCGCGATCGCCG
ACGCCGACTTCCGCAACGACAAGGTCGACGCGGGCGAGCTGGGCAGCGGC
CACCAGGTCGTCGCGCTCTACGAGCTGGTGCTTGGCGACGTCGACACGAG
CGGCGAGCGTCCGCTGGTGACCACCCGCGTGCGCCACAAGGTGCCGCACG
GTGAGCGCGAGCAAGGCGCCGAGGACAAGGCCACCGAGGCCGCGTTCACC
GGCTCGTGGAGCCACGCGACCGGCACCTTCGACATGAACGAGCTCTACCC
CAGCGACCAGATCGCGATCATCACGTTCTCGAACGACGCCAAGCGCGTCT
TCACGATGCAGCCGATCGCGAACCGCTCGGCCATCGAGCAGGCGCTCTAT
GACATGCGTCCGGATGGCGGCACGAACGCCGAGGCGGGCCTGCTCAAGGG
CTATGAAGAGGCCGTGCTGGGCTTCACCGAAGGCGCCGTCAACCGCGTCG
TGTTCCTCAGCGACGGCGTCGGCAACATCGGCGAGACCAACGAGCAGCAG
CTCCTGGACGAAGTGAAGCGCGCCCGCGACAAGGGCATCTACCTCAACAC
GGTGGGGGTTGGCATGGGCAACCACAACGACCGCTTCCTCGAGCAGCTCG
CCAACGGCGGCGACGGGCTCTGCAACTACGTCGACGGCCCGGCGGAGGCC
GAGCGCGCGCTGGTCACGAACTTCACCAGCGCGATGCAGCCGATCGCCCG
CGACGTGAAACTGCAGGTCGAGTTCGATCCCAGCCAGGTCATCGCCTATC
GCCTGCTCGGCTACGAGAACCGCGCGATCGCCGACGCCGACTTCCGCAAC
GACAAGGTCGACGCGGGCGAGCTGGGCAGCGGCCACCAGGTCGTCGCGCT
CTACGAGCTGGTGCTTGGCGACGTCGACACGAGCGGCGAGCGTCCGCTGG
TGACCACCCGCGTGCGCCACAAGGTGCCGCACGGTGAGCGCGAGCAAGGC
GCCGAGGACAAGGCCACCGAGGCCGCGTTCACCGGCTCGTGGAGCCACGC
GACCGGCACCTTCGAC
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