mRNA_M-pyrifera_M_contig89886.20831.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig89886.20831.1 vs. uniprot
Match: UPI00071CFA45 (DNA polymerase epsilon catalytic subunit A-like n=1 Tax=Octopus bimaculoides TaxID=37653 RepID=UPI00071CFA45) HSP 1 Score: 260 bits (665), Expect = 9.840e-79 Identity = 131/232 (56.47%), Postives = 171/232 (73.71%), Query Frame = 1
Query: 1 VEAFRVNVIFPNKERKQVGKM-YEGHLLESETYIGGHVEALESGVYRSDLPVKFKLEPAAFDELINGLDATIRFAIEVEGKACMDDVENLDEVRADIIERLCNLRDRPTRVERPQIYHLDVGAMYPNIILTNRLQPSAVVTDEECAACDFNRPESKCQKPMDWVWRGDFVPATRAEHRAIVAQLESEQFTAKAEDGDEVEVLAFEKLPKAEQHALVMKRLKEYSRKVYKKTH 693
V+A+ NVIFPNK+ + K+ ++GHLL+SETY+GGHVEALESGV+R+D+P +F++ P AF L+N ++ T++ AIEVE K ++ V N DEV DI +RL LRD P R+E P IYHLDVGAMYPNIILTNRLQPSA+V +E CAACDFN+P + CQ+ M W+WRG+++PATR+E + I QLE+E+F G + AF +LP EQ A+ KRL EY RK YKK H
Sbjct: 407 VQAYHANVIFPNKQESVLNKLTHDGHLLDSETYVGGHVEALESGVFRADIPCRFRMVPDAFQTLMNTVEKTMKHAIEVEEKVSLEQVTNFDEVCEDIKDRLAMLRDCPNRLENPIIYHLDVGAMYPNIILTNRLQPSAMVDEEICAACDFNKPGATCQRKMTWMWRGEYMPATRSEFQRIQQQLENEKFPPFFPGGPQ---RAFHQLPAVEQAAIEKKRLAEYCRKAYKKIH 635
BLAST of mRNA_M-pyrifera_M_contig89886.20831.1 vs. uniprot
Match: A0A4P9YWH3_9FUNG (DNA polymerase epsilon catalytic subunit (Fragment) n=1 Tax=Syncephalis pseudoplumigaleata TaxID=1712513 RepID=A0A4P9YWH3_9FUNG) HSP 1 Score: 261 bits (667), Expect = 1.360e-78 Identity = 130/240 (54.17%), Postives = 172/240 (71.67%), Query Frame = 1
Query: 1 VEAFRVNVIFPNKERKQVGKMYEGHLLESETYIGGHVEALESGVYRSDLPVKFKLEPAAFDELINGLDATIRFAIEVEGKACMDDVENLDEVRADIIERLCNLRDRPTRVERPQIYHLDVGAMYPNIILTNRLQPSAVVTDEECAACDFNRPESKCQKPMDWVWRGDFVPATRAEHRAIVAQLESEQFTAKAEDGDEVEVLAFEKLPKAEQHALVMKRLKEYSRKVYKKTHQVQAEKRTA 720
VEA+R NVI PNK ++ K+++GHLLESETY+GGHVEALE+GV+RSD+P++FK+ P+A +LI+ +DA IRF +EVE K M DV N DE+RADI+ RL +LRDRP R E P+IYHLDV AMYPNIILTNRLQP A+V + CA CDFN P +C + M+W+WRG + A R E+R I QL +EQF + + F +LP AEQ ++ KR+ +YSR+VY + H + +R A
Sbjct: 498 VEAYRANVIIPNKYQEPHEKLFDGHLLESETYVGGHVEALEAGVFRSDIPIQFKIVPSAAQQLIDQVDAAIRFTVEVENKRQMSDVLNYDEIRADIVGRLADLRDRPERQEEPRIYHLDVAAMYPNIILTNRLQPDAIVDERICATCDFNLPGKQCDRRMNWLWRGQYFQADRNEYRMIKNQLLTEQFPGRRPTDP---MQPFHQLPPAEQTTIIRKRIGDYSRRVYTRLHATKVVEREA 734
BLAST of mRNA_M-pyrifera_M_contig89886.20831.1 vs. uniprot
Match: A0A812DY64_SEPPH (DNA polymerase epsilon catalytic subunit n=1 Tax=Sepia pharaonis TaxID=158019 RepID=A0A812DY64_SEPPH) HSP 1 Score: 265 bits (676), Expect = 2.930e-78 Identity = 136/241 (56.43%), Postives = 173/241 (71.78%), Query Frame = 1
Query: 1 VEAFRVNVIFPNKERKQVGKMYE-GHLLESETYIGGHVEALESGVYRSDLPVKFKLEPAAFDELINGLDATIRFAIEVEGKACMDDVENLDEVRADIIERLCNLRDRPTRVERPQIYHLDVGAMYPNIILTNRLQPSAVVTDEECAACDFNRPESKCQKPMDWVWRGDFVPATRAEHRAIVAQLESEQFTAKAEDGDEVEVLAFEKLPKAEQHALVMKRLKEYSRKVYKKTHQVQAEKRTA 720
V+A+ N++FPNK+ + KM E GHLL+SETY+GGHVEALESGV+R+D+P +F++ P AFD LIN ++ T++ AIEVE K + V N DEV ADI ERL L+ P R+E P IYHLDVGAMYPNIILTNRLQPSA+V +E CAACDFN+P + CQ+ M W+WRG+ +PATR+E + I QLE+E+F DG + AF LP EQ A+ KRL EY RK YKK H + K+ A
Sbjct: 495 VQAYHANIVFPNKQESVLNKMTEDGHLLDSETYVGGHVEALESGVFRADIPCRFRMVPDAFDTLINAVERTMKHAIEVEEKVPFEQVTNFDEVCADIKERLGELKCCPNRLENPIIYHLDVGAMYPNIILTNRLQPSAMVDEETCAACDFNKPGATCQRKMTWMWRGEHMPATRSEFQRIQQQLENEKFPPAFPDGP---MRAFHALPTTEQAAIEKKRLAEYCRKAYKKVHSTRLGKKVA 732
BLAST of mRNA_M-pyrifera_M_contig89886.20831.1 vs. uniprot
Match: A0A1B6CVE5_9HEMI (DNA polymerase epsilon catalytic subunit (Fragment) n=1 Tax=Clastoptera arizonana TaxID=38151 RepID=A0A1B6CVE5_9HEMI) HSP 1 Score: 261 bits (667), Expect = 6.120e-78 Identity = 132/240 (55.00%), Postives = 172/240 (71.67%), Query Frame = 1
Query: 1 VEAFRVNVIFPNKERKQVGKMY-EGHLLESETYIGGHVEALESGVYRSDLPVKFKLEPAAFDELINGLDATIRFAIEVEGKACMDDVENLDEVRADIIERLCNLRDRPTRVERPQIYHLDVGAMYPNIILTNRLQPSAVVTDEECAACDFNRPESKCQKPMDWVWRGDFVPATRAEHRAIVAQLESEQFTAKAEDGDEVEVLAFEKLPKAEQHALVMKRLKEYSRKVYKKTHQVQAEKRT 717
VEAF N+IFPNK+ ++ KM +GH+L+ ETY+GGHVEALESGV+RSDLP +F++ P AF++LI + ++ AIE E K + V N DE+ D+ +L LRD PTR+E P IYHLDVGAMYPNIILTNRLQPSA+V + CAACDFNRP + CQ+ M W+WRG+++PATR+E + I QLE+E+F G + AF +LP+ EQ + KRL EY RK YKKTH + E+RT
Sbjct: 438 VEAFHANIIFPNKQESELNKMTADGHVLDQETYVGGHVEALESGVFRSDLPCRFRMVPEAFEKLIESAEKALKHAIEEEEKIPLTTVTNFDEIVTDVKTKLGELRDTPTRMENPIIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNRPGATCQRSMTWMWRGEYMPATRSEFQRIQQQLETEKFPPIIPGG---QTRAFHQLPREEQALVEKKRLSEYCRKAYKKTHVTRLEERT 674
BLAST of mRNA_M-pyrifera_M_contig89886.20831.1 vs. uniprot
Match: B3S6C7_TRIAD (DNA polymerase epsilon catalytic subunit n=2 Tax=Trichoplax TaxID=10227 RepID=B3S6C7_TRIAD) HSP 1 Score: 265 bits (678), Expect = 6.210e-78 Identity = 133/232 (57.33%), Postives = 173/232 (74.57%), Query Frame = 1
Query: 1 VEAFRVNVIFPNKERKQVGKMY-EGHLLESETYIGGHVEALESGVYRSDLPVKFKLEPAAFDELINGLDATIRFAIEVEGKACMDDVENLDEVRADIIERLCNLRDRPTRVERPQIYHLDVGAMYPNIILTNRLQPSAVVTDEECAACDFNRPESKCQKPMDWVWRGDFVPATRAEHRAIVAQLESEQFTAKAEDGDEVEVLAFEKLPKAEQHALVMKRLKEYSRKVYKKTH 693
V+A++ N+IFPNK+ + K EGHLLE ETY+GGHVEA+ESGV+RSD+P KFKL PAAFD+L N + AT+R AIEVE K MD V N++EV DI E+L L++ P+R+E P IYHLDVGAMYPNIILTNRLQPSA+V + CAACDFN+P + CQ+ M+W WRG F+PA+R+E+ AI QLESE K+ + + AF +L + EQ ++ KRL +Y R+VY+K H
Sbjct: 494 VQAYQANIIFPNKQETILTKFTDEGHLLEEETYVGGHVEAIESGVFRSDIPCKFKLVPAAFDKLTNNIRATMRHAIEVEEKVPMDSVTNIEEVYEDIAEKLQALKNTPSRLENPLIYHLDVGAMYPNIILTNRLQPSAIVDEATCAACDFNKPGANCQRKMEWTWRGQFMPASRSEYHAIRQQLESEMIPGKSSNEENK---AFYQLSRVEQASIEKKRLADYCRRVYRKVH 722
BLAST of mRNA_M-pyrifera_M_contig89886.20831.1 vs. uniprot
Match: E9H7I0_DAPPU (DNA polymerase epsilon catalytic subunit n=4 Tax=Daphnia TaxID=6668 RepID=E9H7I0_DAPPU) HSP 1 Score: 265 bits (676), Expect = 1.150e-77 Identity = 135/239 (56.49%), Postives = 174/239 (72.80%), Query Frame = 1
Query: 1 VEAFRVNVIFPNKERKQVGKMYE-GHLLESETYIGGHVEALESGVYRSDLPVKFKLEPAAFDELINGLDATIRFAIEVEGKACMDDVENLDEVRADIIERLCNLRDRPTRVERPQIYHLDVGAMYPNIILTNRLQPSAVVTDEECAACDFNRPESKCQKPMDWVWRGDFVPATRAEHRAIVAQLESEQFTAKAEDGDEVEVLAFEKLPKAEQHALVMKRLKEYSRKVYKKTHQVQAEKR 714
VEAFR N+IFPNK+ + + GHLL++ETY+GGHVEALESGV+RSD+P +F+L P AFD LI G++ TI+ A+E E +++V NLDEV DI E+LC+LRD P R+E P IYHLDVGAMYPNIILTNRLQPSA+V + CA+CDFN+PE++CQ+ M W+WRGDF+PATR E + I QLE+E+F + AF +LP+ EQ A +RL EY RK YKK + E+R
Sbjct: 496 VEAFRANIIFPNKQVSLLQNWTDDGHLLDTETYVGGHVEALESGVFRSDIPCRFRLIPQAFDSLIEGIERTIKHAVEEEEHVPIEEVTNLDEVIDDIKEKLCSLRDAPNRIELPVIYHLDVGAMYPNIILTNRLQPSAMVDESVCASCDFNQPEAQCQRSMSWMWRGDFMPATRGEFQRIQQQLENEKFPPVIPG---MPTRAFHQLPREEQSAKEKQRLSEYCRKAYKKVRVTRTEER 731
BLAST of mRNA_M-pyrifera_M_contig89886.20831.1 vs. uniprot
Match: A0A2C9K465_BIOGL (DNA polymerase epsilon catalytic subunit n=1 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9K465_BIOGL) HSP 1 Score: 263 bits (673), Expect = 2.890e-77 Identity = 133/241 (55.19%), Postives = 175/241 (72.61%), Query Frame = 1
Query: 1 VEAFRVNVIFPNKERKQVGKMY-EGHLLESETYIGGHVEALESGVYRSDLPVKFKLEPAAFDELINGLDATIRFAIEVEGKACMDDVENLDEVRADIIERLCNLRDRPTRVERPQIYHLDVGAMYPNIILTNRLQPSAVVTDEECAACDFNRPESKCQKPMDWVWRGDFVPATRAEHRAIVAQLESEQFTAKAEDGDEVEVLAFEKLPKAEQHALVMKRLKEYSRKVYKKTHQVQAEKRTA 720
V+AF N+I+PNK+ + KM +GH+L+SETY+GGHVEALESGV+R+DLP +F++ PAAF L++ +D T++FA+E E K + V N +E+ ADI E+L LRD P R+E P IYHLDVGAMYPNIILTNRLQP A+V +E CAACDFN+P ++CQ+ M W+WRG+F+PATR E I QLE+E+F + DG + AF +L K EQ KRL +Y RK YKK H + E+RTA
Sbjct: 507 VQAFHANIIYPNKQESILNKMTTDGHVLDSETYVGGHVEALESGVFRADLPCRFRMVPAAFQTLLDAVDRTLKFALEEEEKVPLSAVVNFNEISADIKEKLAQLRDCPNRLENPIIYHLDVGAMYPNIILTNRLQPPAIVNEETCAACDFNKPGARCQRNMPWMWRGEFMPATRNEFYRIQQQLENEKFPPQYPDGP---LRAFHELSKEEQAXYREKRLADYCRKAYKKVHTTRMEERTA 744
BLAST of mRNA_M-pyrifera_M_contig89886.20831.1 vs. uniprot
Match: A0A7E6EV30_OCTVU (DNA polymerase epsilon catalytic subunit n=1 Tax=Octopus vulgaris TaxID=6645 RepID=A0A7E6EV30_OCTVU) HSP 1 Score: 263 bits (672), Expect = 3.970e-77 Identity = 133/232 (57.33%), Postives = 171/232 (73.71%), Query Frame = 1
Query: 1 VEAFRVNVIFPNKERKQVGKMYE-GHLLESETYIGGHVEALESGVYRSDLPVKFKLEPAAFDELINGLDATIRFAIEVEGKACMDDVENLDEVRADIIERLCNLRDRPTRVERPQIYHLDVGAMYPNIILTNRLQPSAVVTDEECAACDFNRPESKCQKPMDWVWRGDFVPATRAEHRAIVAQLESEQFTAKAEDGDEVEVLAFEKLPKAEQHALVMKRLKEYSRKVYKKTH 693
V+A+ NVIFPNK+ + K+ + GHLL+SETY+GGHVEALESGV+R+D+P +F++ P AF LIN ++ T++ AIEVE K ++ V N DEV DI +RL LRD P R+E P IYHLDVGAMYPNIILTNRLQPSA+V +E CAACDFN+P + CQ+ M W+WRG+++PATR+E + I QLE+E+F DG + AF +LP EQ A+ KRL EY RK YKK H
Sbjct: 495 VQAYHANVIFPNKQESVLNKLTDDGHLLDSETYVGGHVEALESGVFRADIPCRFRMVPDAFQTLINTVEKTMKHAIEVEEKVSLEQVTNFDEVCEDIKDRLAMLRDCPNRLENPIIYHLDVGAMYPNIILTNRLQPSAMVDEEICAACDFNKPGATCQRKMTWMWRGEYMPATRSEFQRIQQQLENEKFPPFFPDGPQ---RAFHQLPAVEQAAIEKKRLAEYCRKAYKKVH 723
BLAST of mRNA_M-pyrifera_M_contig89886.20831.1 vs. uniprot
Match: A0A2T7P2L8_POMCA (DNA polymerase epsilon catalytic subunit n=2 Tax=Pomacea canaliculata TaxID=400727 RepID=A0A2T7P2L8_POMCA) HSP 1 Score: 262 bits (669), Expect = 9.920e-77 Identity = 131/241 (54.36%), Postives = 174/241 (72.20%), Query Frame = 1
Query: 1 VEAFRVNVIFPNKERKQVGKMYE-GHLLESETYIGGHVEALESGVYRSDLPVKFKLEPAAFDELINGLDATIRFAIEVEGKACMDDVENLDEVRADIIERLCNLRDRPTRVERPQIYHLDVGAMYPNIILTNRLQPSAVVTDEECAACDFNRPESKCQKPMDWVWRGDFVPATRAEHRAIVAQLESEQFTAKAEDGDEVEVLAFEKLPKAEQHALVMKRLKEYSRKVYKKTHQVQAEKRTA 720
V+A+ N+IFPNK+ + K+ + GH+L+SETY+GGHVEALESGV+R+D+P +F++ P AF LI+ + TI+ AIE E K ++ V N +EV DI+E+L LRD P R+E P IYHLDVGAMYPNIILTNRLQP A+V +E CAACDFN+P S+CQ+ M W+WRG+F+PATR E+ I QLE+E+F + G + AF +LP+ EQ + KRL EY RK YKK H + E+R A
Sbjct: 300 VQAYHANIIFPNKQESVLNKLTDDGHMLDSETYVGGHVEALESGVFRADIPCRFRMVPQAFQMLIDSVKRTIKHAIEEEEKVPLEQVSNFEEVCNDIVEKLSMLRDCPNRLENPIIYHLDVGAMYPNIILTNRLQPPAIVDEETCAACDFNKPGSRCQRRMPWMWRGEFMPATRNEYHRIQQQLENEKFPPEFPGGPQ---RAFHQLPREEQATIEKKRLAEYCRKAYKKVHSTRMEQRVA 537
BLAST of mRNA_M-pyrifera_M_contig89886.20831.1 vs. uniprot
Match: A0A507F198_9FUNG (DNA polymerase epsilon catalytic subunit n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A507F198_9FUNG) HSP 1 Score: 261 bits (666), Expect = 2.550e-76 Identity = 132/233 (56.65%), Postives = 168/233 (72.10%), Query Frame = 1
Query: 1 VEAFRVNVIFPNKERKQVGKMYEGHLLESETYIGGHVEALESGVYRSDLPVKFKLEPAAFDELINGLDATIRFAIEVEGKACMDDVENLDEVRADIIERLCNLRDRPTRVERPQIYHLDVGAMYPNIILTNRLQPSAVVTDEECAACDFNR-PESKCQKPMDWVWRGDFVPATRAEHRAIVAQLESEQFTAKAEDGDEVEVLAFEKLPKAEQHALVMKRLKEYSRKVYKKTHQ 696
V+A++ NVI PNK +VG+ +EGHLLESETY+GGHVEALE+GV+RSDLPVKF+L P AF +LI+ +D ++F+I VEG ++DV N DEVRA I+E L NLR+ P R+E+P IYHLDV AMYPNIILTNRLQP A+V +E CAACDFN+ P S CQ+ M W WRG++ PA R+E+ I Q++ E+F K AF +L EQ + KRL YSRKVY K H+
Sbjct: 558 VQAYKANVIMPNKHVDKVGQFFEGHLLESETYVGGHVEALEAGVFRSDLPVKFRLVPEAFQQLIDEIDQALKFSIVVEGNLKLEDVTNYDEVRAQIVEALANLREIPNRLEKPSIYHLDVAAMYPNIILTNRLQPDAIVDEETCAACDFNQGPGSTCQRNMLWSWRGEYFPAKRSEYNMIRNQMQQEKFPGKLPTDPP---RAFHELRVHEQQTQIKKRLSTYSRKVYNKIHE 787 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig89886.20831.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig89886.20831.1 >prot_M-pyrifera_M_contig89886.20831.1 ID=prot_M-pyrifera_M_contig89886.20831.1|Name=mRNA_M-pyrifera_M_contig89886.20831.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=240bp VEAFRVNVIFPNKERKQVGKMYEGHLLESETYIGGHVEALESGVYRSDLPback to top mRNA from alignment at M-pyrifera_M_contig89886:2..799- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig89886.20831.1 ID=mRNA_M-pyrifera_M_contig89886.20831.1|Name=mRNA_M-pyrifera_M_contig89886.20831.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=798bp|location=Sequence derived from alignment at M-pyrifera_M_contig89886:2..799- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig89886:2..799- >mRNA_M-pyrifera_M_contig89886.20831.1 ID=mRNA_M-pyrifera_M_contig89886.20831.1|Name=mRNA_M-pyrifera_M_contig89886.20831.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1440bp|location=Sequence derived from alignment at M-pyrifera_M_contig89886:2..799- (Macrocystis pyrifera P11B4 male)back to top |