mRNA_M-pyrifera_M_contig89131.20666.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig89131.20666.1
Unique NamemRNA_M-pyrifera_M_contig89131.20666.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig89131.20666.1 vs. uniprot
Match: A0A836CDZ2_9STRA (40S ribosomal protein S6 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDZ2_9STRA)

HSP 1 Score: 239 bits (610), Expect = 1.330e-76
Identity = 134/211 (63.51%), Postives = 162/211 (76.78%), Query Frame = 1
Query:    1 YDKRMSEEVPGELLGSGFEGYVFRIAGGNDKQGFPMMQGVLVSHRVRLLLSKGMTYYRPRRKGERKRKSVRGCIVGPDLSVVQLVLVKKGDGEVPGLTDEVVPARLGPKRANKVRKYFDLPEDADPRDFTVKRIVERKGGKTVVKKPKVQRLITPRRLQHKAKRQAARKAKLEESKAAALEYKHLLEQRAQE----RRASAAARKSSRKGS 621
            YDKR+S+EV GE LG  F GYVFRI+GGNDKQGFPM QGVL +HRVRLLLSKG++ YRPRRKGERKRKSVRGCIVG DL+V+ LV+VKKG+GEVPGLTD  VP RLGPKRANK+RK F+L ++ D R + + R  E+KG KTV K+PK+QRLITP +LQ   +R + +K    +SKA A EY  L  QR +E    RR+  + R+SSRK S
Sbjct:   28 YDKRISQEVEGEALGEEFSGYVFRISGGNDKQGFPMKQGVLCNHRVRLLLSKGLSCYRPRRKGERKRKSVRGCIVGSDLAVLNLVIVKKGEGEVPGLTDVTVPRRLGPKRANKIRKLFNLSKEDDVRKYVIARKFEKKG-KTVTKRPKIQRLITPAKLQRTRRRASLKKQAQVKSKADAAEYGRLYAQRMKEAKEARRSIISKRRSSRKAS 237          
BLAST of mRNA_M-pyrifera_M_contig89131.20666.1 vs. uniprot
Match: A0A5A8CKC7_CAFRO (40S ribosomal protein S6 n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CKC7_CAFRO)

HSP 1 Score: 238 bits (607), Expect = 3.020e-76
Identity = 133/211 (63.03%), Postives = 165/211 (78.20%), Query Frame = 1
Query:    1 YDKRMSEEVPGELLGSGFEGYVFRIAGGNDKQGFPMMQGVLVSHRVRLLLSKGMTYYRPRRKGERKRKSVRGCIVGPDLSVVQLVLVKKGDGEVPGLTDE--VVPARLGPKRANKVRKYFDLPEDADPRDFTVKRIVERKGGKTVVKKPKVQRLITPRRLQHKAKRQAARKAKLEESKAAALEYKHLLEQRAQERRASAAARKSSRKGSRA 627
            YDKR+S+EV G+ LG  FE ++FRIAGGNDKQGFPMMQGVL   RVRLL+SKGMTYYRPRR GERKRKSVRGCI+GPD+SV+QLV+VK G  E PGLTDE  V P RLGPKRAN +RK F+L  +    D+ +KR V RKG +TV K PK+QRL+TPRR+  K + QA++ A  E++++ A EY+ L++ RA ERR SAAAR+SSR+  +A
Sbjct:   28 YDKRISQEVDGKALGDEFEDFIFRIAGGNDKQGFPMMQGVLRGERVRLLMSKGMTYYRPRRAGERKRKSVRGCIIGPDISVIQLVVVKAGK-EFPGLTDEASVRPRRLGPKRANNIRKLFNLSPEDKVEDYVIKRDVTRKG-RTVTKSPKIQRLVTPRRVMRKQQYQASKVAAREKARSEAAEYEALIKARADERRESAAARRSSRRSGKA 236          
BLAST of mRNA_M-pyrifera_M_contig89131.20666.1 vs. uniprot
Match: W7TEA2_9STRA (40S ribosomal protein S6 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TEA2_9STRA)

HSP 1 Score: 238 bits (607), Expect = 3.670e-76
Identity = 131/210 (62.38%), Postives = 159/210 (75.71%), Query Frame = 1
Query:    1 YDKRMSEEVPGELLGSGFEGYVFRIAGGNDKQGFPMMQGVLVSHRVRLLLSKGMTYYRPRRKGERKRKSVRGCIVGPDLSVVQLVLVKKGDGEVPGLTDEVVPARLGPKRANKVRKYFDLPEDADPRDFTVKRIVERKGGKTVVKKPKVQRLITPRRLQHKAKRQAARKAKLEESKAAALEYKHLLEQRAQERRASAAARKSSRKGSRAA 630
            YD+R+S+EV GE +G  F+GYVF+I+GGNDKQGFPM QGVL   RVRLLL KG++ YR RRKGERKRKSVRG IVGPDLSV+ LVLVK+G+ +V GLTD  VP RLGPKRAN +RK F+L +DAD   + V+R  E K GKTVVKKPK+QRLITP RLQHK +R  A+KA   ++KA A EY  + +QR  ER+ S  +  S R+ SR A
Sbjct:   28 YDRRISQEVDGEHIGDEFKGYVFKISGGNDKQGFPMKQGVLTDQRVRLLLRKGLSCYRARRKGERKRKSVRGAIVGPDLSVLNLVLVKRGEEDVVGLTDSAVPRRLGPKRANNIRKLFNLSKDADVTTYPVERKFENKKGKTVVKKPKIQRLITPLRLQHKRRRLEAKKAATTKAKAEAAEYHRIFQQRLNERKESRRSAISKRRSSRRA 237          
BLAST of mRNA_M-pyrifera_M_contig89131.20666.1 vs. uniprot
Match: A0A2T0FFS7_9ASCO (40S ribosomal protein S6 n=1 Tax=Wickerhamiella sorbophila TaxID=45607 RepID=A0A2T0FFS7_9ASCO)

HSP 1 Score: 229 bits (585), Expect = 6.790e-73
Identity = 122/207 (58.94%), Postives = 152/207 (73.43%), Query Frame = 1
Query:    1 YDKRMSEEVPGELLGSGFEGYVFRIAGGNDKQGFPMMQGVLVSHRVRLLLSKGMTYYRPRRKGERKRKSVRGCIVGPDLSVVQLVLVKKGDGEVPGLTDEVVPARLGPKRANKVRKYFDLPEDADPRDFTVKRIVERKGGKTVVKKPKVQRLITPRRLQHKAKRQAARKAKLEESKAAALEYKHLLEQRAQERRASAAARKSSRKGS 621
            YDKRM +E+ G+ LG  F+GY F+I GGNDKQGFPM QGVL   RVRLL+ KG + YRPRR GERKRKSVRGCIVGPD++V+ LV++K+GD E+ GLTD  VP RLGPKRAN +RK+F L ++ D R F ++R V  K GKT  K PK+QRLITPRRLQHK + +AA+ A +++SK  A EY  LL +R  E++A  A  K  R  S
Sbjct:   28 YDKRMGQEIEGDSLGDEFKGYTFKITGGNDKQGFPMKQGVLHPTRVRLLMDKGHSCYRPRRAGERKRKSVRGCIVGPDMAVLSLVVLKQGDAEIEGLTDTSVPKRLGPKRANNIRKFFGLSKEDDVRQFVIRREVTGKNGKTYTKAPKIQRLITPRRLQHKRRHRAAKLAAVQKSKDEAAEYAQLLAKRVSEKKAEKAEIKKRRASS 234          
BLAST of mRNA_M-pyrifera_M_contig89131.20666.1 vs. uniprot
Match: A0A1X2HUT5_SYNRA (40S ribosomal protein S6 n=2 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2HUT5_SYNRA)

HSP 1 Score: 227 bits (579), Expect = 8.100e-72
Identity = 119/206 (57.77%), Postives = 159/206 (77.18%), Query Frame = 1
Query:    4 DKRMSEEVPGELLGSGFEGYVFRIAGGNDKQGFPMMQGVLVSHRVRLLLSKGMTYYRPRRKGERKRKSVRGCIVGPDLSVVQLVLVKKGDGEVPGLTDEVVPARLGPKRANKVRKYFDLPEDADPRDFTVKRIVERK--GGKTVVKKPKVQRLITPRRLQHKAKRQAARKAKLEESKAAALEYKHLLEQRAQERRASAAARKSSRK 615
            DKRMS++V G+ LG  F+GYVFRI+GGNDKQGFPM QGVLV HRVRLL+ KG + YRPRR GERKRKSVRGCIV  DL+V+ LV+VKKG+ ++PGLTD+ VP RLGPKRA+K+R++F+L ++ D R + ++R V+ K  G K   K PK+QRL+TPR LQH+ +R A ++ + E S+ A  EYK +L +RA+E + + A RK+ R+
Sbjct:   29 DKRMSQQVAGDSLGDEFKGYVFRISGGNDKQGFPMKQGVLVPHRVRLLMGKGHSCYRPRRTGERKRKSVRGCIVSSDLAVMSLVVVKKGEQDIPGLTDKTVPKRLGPKRASKIRRFFNLSKEDDVRKYVIRREVQPKKEGAKPYTKAPKIQRLVTPRTLQHRRQRVAIKRRRAEASREAEAEYKQILAKRAKEAKQAQAQRKADRR 234          
BLAST of mRNA_M-pyrifera_M_contig89131.20666.1 vs. uniprot
Match: D8QGN2_SCHCM (40S ribosomal protein S6 n=2 Tax=Schizophyllaceae TaxID=5332 RepID=D8QGN2_SCHCM)

HSP 1 Score: 226 bits (576), Expect = 1.970e-71
Identity = 119/208 (57.21%), Postives = 157/208 (75.48%), Query Frame = 1
Query:    1 YDKRMSEEVPGELLGSGFEGYVFRIAGGNDKQGFPMMQGVLVSHRVRLLLSKGMTYYRPRRKGERKRKSVRGCIVGPDLSVVQLVLVKKGDGEVPGLTDEVVPARLGPKRANKVRKYFDLPEDADPRDFTVKRIVE---RKGGKTVVKKPKVQRLITPRRLQHKAKRQAARKAKLEESKAAALEYKHLLEQRAQERRASAAARKSSRK 615
            YDK+MS+EVPG+ LG  F+GYVFRI GGNDKQGFPM QGVL+ HRVRLLLS+G + YRPRR+GERKRKSVRGCIVGPD++V+ LV+VK+GD E+PGLTD+V+P RLGPKRA K+R+ F+L +D D R + V+R V+   ++  K   K PK+QRL+TP RLQ +   ++ ++ +LE  K    E+  LL +R  E++A  AA K+  K
Sbjct:   28 YDKKMSQEVPGDSLGDEFKGYVFRITGGNDKQGFPMKQGVLLPHRVRLLLSEGHSCYRPRREGERKRKSVRGCIVGPDIAVLSLVIVKQGDAEIPGLTDQVLPKRLGPKRATKIRRMFNLTKDDDVRKYVVRREVKSGKKENAKPYTKAPKIQRLVTPMRLQRRRHLRSVKRRRLERQKEQKTEFDALLAKRVAEKKAKVAAIKAHHK 235          
BLAST of mRNA_M-pyrifera_M_contig89131.20666.1 vs. uniprot
Match: S2JM63_MUCC1 (40S ribosomal protein S6 n=12 Tax=Mucorales TaxID=4827 RepID=S2JM63_MUCC1)

HSP 1 Score: 225 bits (574), Expect = 3.590e-71
Identity = 119/194 (61.34%), Postives = 150/194 (77.32%), Query Frame = 1
Query:    1 YDKRMSEEVPGELLGSGFEGYVFRIAGGNDKQGFPMMQGVLVSHRVRLLLSKGMTYYRPRRKGERKRKSVRGCIVGPDLSVVQLVLVKKGDGEVPGLTDEVVPARLGPKRANKVRKYFDLPEDADPRDFTVKRIVERK--GGKTVVKKPKVQRLITPRRLQHKAKRQAARKAKLEESKAAALEYKHLLEQRAQE 576
            YDKRM++EV G+ LG  F+GYVFRI+GGNDKQGFPM QGVL+ HRVRLLLSKG + YRPRR GERKRKSVRGCIVG DLSV+ LV+VK+G+ ++PGLTD  VP RLGPKRA+K+RK+F+L ++ D R + ++R V+ K  G K   K PK+QRL+TP  LQ K  RQA ++ + E S+ A  EYK LL +R +E
Sbjct:   28 YDKRMAQEVSGDSLGDEFKGYVFRISGGNDKQGFPMKQGVLLPHRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVGSDLSVLSLVVVKQGEQDIPGLTDTTVPKRLGPKRASKIRKFFNLSKEDDVRKYVIRREVQPKAEGKKAYTKAPKIQRLVTPLTLQRKRHRQALKRRRAEASREAESEYKQLLAKRVKE 221          
BLAST of mRNA_M-pyrifera_M_contig89131.20666.1 vs. uniprot
Match: A0A8H7ZRT1_9FUNG (40S ribosomal protein S6 n=1 Tax=Olpidium bornovanus TaxID=278681 RepID=A0A8H7ZRT1_9FUNG)

HSP 1 Score: 225 bits (573), Expect = 4.200e-71
Identity = 117/196 (59.69%), Postives = 150/196 (76.53%), Query Frame = 1
Query:    1 YDKRMSEEVPGELLGSGFEGYVFRIAGGNDKQGFPMMQGVLVSHRVRLLLSKGMTYYRPRRKGERKRKSVRGCIVGPDLSVVQLVLVKKGDGEVPGLTDEVVPARLGPKRANKVRKYFDLPEDADPRDFTVKRIVERKGG--KTVVKKPKVQRLITPRRLQHKAKRQAARKAKLEESKAAALEYKHLLEQRAQERR 582
            YDKRMS+EVPG+ +G  F+GY+FRI GGNDKQGFPM QGVLV HRVRLLLSKG + YRPRR GERKRKSVRGCIVGPDLSV+ LV+VK+G+ ++PG+TD  +P RLGPKRA+K+RK F+L +  D R + ++R V+ K    K   K PK+QRL+TPR LQ K   +A ++  +E SK AA +Y  LL +R +E++
Sbjct:   16 YDKRMSQEVPGDSVGDEFKGYIFRITGGNDKQGFPMKQGVLVPHRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVGPDLSVISLVIVKQGEQDIPGVTDTAIPKRLGPKRASKIRKMFNLSKKDDVRKYVIRREVQPKNPDRKPYTKAPKIQRLVTPRTLQRKRHLKAVKRRAIEASKEAAADYAKLLAKRLKEKK 211          
BLAST of mRNA_M-pyrifera_M_contig89131.20666.1 vs. uniprot
Match: A0A261Y1S5_9FUNG (40S ribosomal protein S6 n=1 Tax=Bifiguratus adelaidae TaxID=1938954 RepID=A0A261Y1S5_9FUNG)

HSP 1 Score: 226 bits (576), Expect = 4.620e-71
Identity = 120/194 (61.86%), Postives = 148/194 (76.29%), Query Frame = 1
Query:    1 YDKRMSEEVPGELLGSGFEGYVFRIAGGNDKQGFPMMQGVLVSHRVRLLLSKGMTYYRPRRKGERKRKSVRGCIVGPDLSVVQLVLVKKGDGEVPGLTDEVVPARLGPKRANKVRKYFDLPEDADPRDFTVKRIVERKGG--KTVVKKPKVQRLITPRRLQHKAKRQAARKAKLEESKAAALEYKHLLEQRAQE 576
            YDKRMS EVPG+ +G  F+GYVFRI GGNDKQGFPM QGVL+ HRVRLLLS+G + YRPRR GERKRKSVRGCIVGPDL+V+ LV+VK+G+ ++PGLTD  VP RLGPKRAN +RK+F+L ++ D R F ++R V+ K    K   K PK+QRLITP RLQ K +   A++ + E SK AA EY  LL +R +E
Sbjct:   54 YDKRMSAEVPGDSVGDEFKGYVFRITGGNDKQGFPMKQGVLLPHRVRLLLSEGHSCYRPRRAGERKRKSVRGCIVGPDLAVLSLVIVKQGENDIPGLTDSAVPKRLGPKRANHIRKFFNLSKEDDVRKFVIRREVKPKNPEKKPYTKAPKIQRLITPARLQRKRQNILAKRRRAEASKEAAAEYSALLAKRVKE 247          
BLAST of mRNA_M-pyrifera_M_contig89131.20666.1 vs. uniprot
Match: A0A4P9Z6W8_9FUNG (40S ribosomal protein S6-B (Fragment) n=1 Tax=Syncephalis pseudoplumigaleata TaxID=1712513 RepID=A0A4P9Z6W8_9FUNG)

HSP 1 Score: 225 bits (573), Expect = 5.430e-71
Identity = 119/206 (57.77%), Postives = 152/206 (73.79%), Query Frame = 1
Query:    1 YDKRMSEEVPGELLGSGFEGYVFRIAGGNDKQGFPMMQGVLVSHRVRLLLSKGMTYYRPRRKGERKRKSVRGCIVGPDLSVVQLVLVKKGDGEVPGLTDEVVPARLGPKRANKVRKYFDLPEDADPRDFTVKRIVERKGG--KTVVKKPKVQRLITPRRLQHKAKRQAARKAKLEESKAAALEYKHLLEQRAQERRASAAARKSSR 612
            YDKR+S EVPG+ +G  F+GYVFRI GGNDKQGFPM QGVL+ HRVRLLLSKG + YRPRR GERKRKSVRGCI GPD++V+ L +VK+GD ++PGLTD+V+P RLGPKRAN +RK F+L +D D R + ++R V+ K    K   K PK+QRL+TP  LQ K  R A +  + + SK AA EY+ LL  R +E+R +   R+ +R
Sbjct:   26 YDKRISTEVPGDSIGDEFKGYVFRITGGNDKQGFPMKQGVLLPHRVRLLLSKGHSCYRPRRTGERKRKSVRGCIAGPDMAVISLTVVKQGDNDIPGLTDQVLPKRLGPKRANNIRKLFNLTKDDDVRKYVIRREVQPKNAEKKPYTKAPKIQRLVTPLTLQRKRHRMALKARRAQASKEAAAEYQKLLHLRMKEKRQAIHKRREAR 231          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig89131.20666.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CDZ2_9STRA1.330e-7663.5140S ribosomal protein S6 n=1 Tax=Tribonema minus T... [more]
A0A5A8CKC7_CAFRO3.020e-7663.0340S ribosomal protein S6 n=1 Tax=Cafeteria roenber... [more]
W7TEA2_9STRA3.670e-7662.3840S ribosomal protein S6 n=2 Tax=Monodopsidaceae T... [more]
A0A2T0FFS7_9ASCO6.790e-7358.9440S ribosomal protein S6 n=1 Tax=Wickerhamiella so... [more]
A0A1X2HUT5_SYNRA8.100e-7257.7740S ribosomal protein S6 n=2 Tax=Syncephalastrum r... [more]
D8QGN2_SCHCM1.970e-7157.2140S ribosomal protein S6 n=2 Tax=Schizophyllaceae ... [more]
S2JM63_MUCC13.590e-7161.3440S ribosomal protein S6 n=12 Tax=Mucorales TaxID=... [more]
A0A8H7ZRT1_9FUNG4.200e-7159.6940S ribosomal protein S6 n=1 Tax=Olpidium bornovan... [more]
A0A261Y1S5_9FUNG4.620e-7161.8640S ribosomal protein S6 n=1 Tax=Bifiguratus adela... [more]
A0A4P9Z6W8_9FUNG5.430e-7157.7740S ribosomal protein S6-B (Fragment) n=1 Tax=Sync... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig89131contigM-pyrifera_M_contig89131:172..810 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score224.2
Seed ortholog evalue5.8e-56
Seed eggNOG ortholog936053.I1BLS7
Preferred nameRPS6
KEGG koko:K02991
KEGG Pathwayko01521,ko03010,ko04066,ko04150,ko04151,ko04371,ko04714,ko04910,ko05205,map01521,map03010,map04066,map04150,map04151,map04371,map04714,map04910,map05205
KEGG ModuleM00177,M00179
Hectar predicted targeting categoryother localisation
GOsGO:0000462,GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022626,GO:0022627,GO:0030490,GO:0030684,GO:0030686,GO:0032040,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1990904
EggNOG free text desc.Ribosomal protein S6e
EggNOG OGs1GSVA@112252,38HEM@33154,3NUD1@4751,COG2125@1,KOG1646@2759
COG Functional cat.J
Best tax levelFungi incertae sedis
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko03011
Exons1
Model size639
Cds size627
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816801.6929405-CDS-M-pyrifera_M_contig89131:171..7981622816801.6929405-CDS-M-pyrifera_M_contig89131:171..798Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig89131 172..798 -
1692278186.965634-CDS-M-pyrifera_M_contig89131:171..7981692278186.965634-CDS-M-pyrifera_M_contig89131:171..798Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig89131 172..798 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816801.704542-UTR-M-pyrifera_M_contig89131:798..8101622816801.704542-UTR-M-pyrifera_M_contig89131:798..810Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig89131 799..810 -
1692278186.9835792-UTR-M-pyrifera_M_contig89131:798..8101692278186.9835792-UTR-M-pyrifera_M_contig89131:798..810Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig89131 799..810 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig89131.20666.1prot_M-pyrifera_M_contig89131.20666.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig89131 172..798 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig89131.20666.1

>prot_M-pyrifera_M_contig89131.20666.1 ID=prot_M-pyrifera_M_contig89131.20666.1|Name=mRNA_M-pyrifera_M_contig89131.20666.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=209bp
MSEEVPGELLGSGFEGYVFRIAGGNDKQGFPMMQGVLVSHRVRLLLSKGM
TYYRPRRKGERKRKSVRGCIVGPDLSVVQLVLVKKGDGEVPGLTDEVVPA
RLGPKRANKVRKYFDLPEDADPRDFTVKRIVERKGGKTVVKKPKVQRLIT
PRRLQHKAKRQAARKAKLEESKAAALEYKHLLEQRAQERRASAAARKSSR
KGSRAAEV*
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mRNA from alignment at M-pyrifera_M_contig89131:172..810-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig89131.20666.1 ID=mRNA_M-pyrifera_M_contig89131.20666.1|Name=mRNA_M-pyrifera_M_contig89131.20666.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=639bp|location=Sequence derived from alignment at M-pyrifera_M_contig89131:172..810- (Macrocystis pyrifera P11B4 male)
TACGACAAGCGCATGTCTGAGGAGGTTCCCGGGGAGCTGTTGGGCTCTGG TTTCGAGGGCTACGTGTTCCGCATCGCAGGAGGGAACGACAAGCAGGGCT TCCCAATGATGCAGGGCGTTTTGGTGTCGCACCGCGTGCGTCTGTTGCTT TCGAAGGGCATGACGTACTACCGGCCCCGTCGCAAGGGGGAGCGCAAGCG AAAGAGCGTGCGTGGGTGCATTGTGGGTCCCGACCTCAGCGTGGTGCAAT TGGTGTTGGTGAAGAAAGGCGACGGGGAAGTTCCAGGCCTGACTGACGAA GTTGTCCCTGCTCGTTTGGGCCCCAAGCGTGCCAACAAGGTGCGCAAGTA CTTTGACTTGCCAGAAGACGCCGATCCCCGTGATTTCACCGTGAAGCGCA TTGTGGAACGCAAAGGAGGCAAGACTGTGGTCAAGAAGCCAAAAGTGCAA CGCCTCATCACCCCCCGCCGCCTCCAGCACAAGGCCAAGCGCCAAGCAGC GCGCAAGGCCAAGCTCGAAGAGTCCAAGGCAGCAGCACTCGAGTACAAGC ACCTCCTCGAACAACGCGCCCAGGAACGCCGCGCCTCAGCAGCTGCTCGC AAATCCTCCCGTAAAGGGTCCCGGGCAGCAGAGGTGTAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig89131:172..810-

>mRNA_M-pyrifera_M_contig89131.20666.1 ID=mRNA_M-pyrifera_M_contig89131.20666.1|Name=mRNA_M-pyrifera_M_contig89131.20666.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1254bp|location=Sequence derived from alignment at M-pyrifera_M_contig89131:172..810- (Macrocystis pyrifera P11B4 male)
ATGTCTGAGGAGGTTCCCGGGGAGCTGTTGGGCTCTGGTTTCGAGGGCTA
CGTGTTCCGCATCGCAGGAGGGAACGACAAGCAGGGCTTCCCAATGATGC
AGGGCGTTTTGGTGTCGCACCGCGTGCGTCTGTTGCTTTCGAAGGGCATG
ACGTACTACCGGCCCCGTCGCAAGGGGGAGCGCAAGCGAAAGAGCGTGCG
TGGGTGCATTGTGGGTCCCGACCTCAGCGTGGTGCAATTGGTGTTGGTGA
AGAAAGGCGACGGGGAAGTTCCAGGCCTGACTGACGAAGTTGTCCCTGCT
CGTTTGGGCCCCAAGCGTGCCAACAAGGTGCGCAAGTACTTTGACTTGCC
AGAAGACGCCGATCCCCGTGATTTCACCGTGAAGCGCATTGTGGAACGCA
AAGGAGGCAAGACTGTGGTCAAGAAGCCAAAAGTGCAACGCCTCATCACC
CCCCGCCGCCTCCAGCACAAGGCCAAGCGCCAAGCAGCGCGCAAGGCCAA
GCTCGAAGAGTCCAAGGCAGCAGCACTCGAGTACAAGCACCTCCTCGAAC
AACGCGCCCAGGAACGCCGCGCCTCAGCAGCTGCTCGCAAATCCTCCCGT
AAAGGGTCCCGGGCAGCAGAGGTGTAAATGTCTGAGGAGGTTCCCGGGGA
GCTGTTGGGCTCTGGTTTCGAGGGCTACGTGTTCCGCATCGCAGGAGGGA
ACGACAAGCAGGGCTTCCCAATGATGCAGGGCGTTTTGGTGTCGCACCGC
GTGCGTCTGTTGCTTTCGAAGGGCATGACGTACTACCGGCCCCGTCGCAA
GGGGGAGCGCAAGCGAAAGAGCGTGCGTGGGTGCATTGTGGGTCCCGACC
TCAGCGTGGTGCAATTGGTGTTGGTGAAGAAAGGCGACGGGGAAGTTCCA
GGCCTGACTGACGAAGTTGTCCCTGCTCGTTTGGGCCCCAAGCGTGCCAA
CAAGGTGCGCAAGTACTTTGACTTGCCAGAAGACGCCGATCCCCGTGATT
TCACCGTGAAGCGCATTGTGGAACGCAAAGGAGGCAAGACTGTGGTCAAG
AAGCCAAAAGTGCAACGCCTCATCACCCCCCGCCGCCTCCAGCACAAGGC
CAAGCGCCAAGCAGCGCGCAAGGCCAAGCTCGAAGAGTCCAAGGCAGCAG
CACTCGAGTACAAGCACCTCCTCGAACAACGCGCCCAGGAACGCCGCGCC
TCAGCAGCTGCTCGCAAATCCTCCCGTAAAGGGTCCCGGGCAGCAGAGGT
GTAA
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