mRNA_M-pyrifera_M_contig89109.20657.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig89109.20657.1 vs. uniprot
Match: A0A6N7FVK3_9ACTN (Branched-chain amino acid ABC transporter permease n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A6N7FVK3_9ACTN) HSP 1 Score: 205 bits (521), Expect = 2.390e-63 Identity = 118/196 (60.20%), Postives = 144/196 (73.47%), Query Frame = 1 Query: 1 GITFGVLATTSGLSIAQAIAMSLLVFTGASQFTAASVIGAGGSPAAALASALLLGARNAFYGISVAKIVPPDTPWWKRLVTAQLTIDESTALAMAQRDPADRYDAFLAGGVSVFVFWNLGTVLGAVGGDAIGDPAALGLDAAFPAGFIALMMPALRHRSGLLAAIAGAGLAATLIPFTRPGIPVLAASLGAVLAFK 588 G FGVLATTSGLS+AQA A+SLLVFTGASQF SV+ +GGS AA SALLL ARN YG+++A+++P P RL AQL IDESTA+A+AQ D +AF A G+SVFV WNLGT+LGA+GG + DP +LGLDAAFPAGFIAL++P LR R G L+A+AGA +AA +P G PVL ASLG +L + Sbjct: 37 GTAFGVLATTSGLSVAQAAALSLLVFTGASQFALVSVVASGGSLVAAFGSALLLAARNGIYGVAMARLLPRRVP--ARLAAAQLVIDESTAMAVAQPDDRRAREAFFATGISVFVAWNLGTMLGALGGSRLADPESLGLDAAFPAGFIALLLPHLRTRGGRLSALAGAAVAAVGLPLLPNGAPVLVASLGVLLGAR 230
BLAST of mRNA_M-pyrifera_M_contig89109.20657.1 vs. uniprot
Match: A0A8F4J449_9ACTN (AzlC family ABC transporter permease n=1 Tax=Aquihabitans sp. G128 TaxID=2849779 RepID=A0A8F4J449_9ACTN) HSP 1 Score: 204 bits (520), Expect = 3.180e-63 Identity = 119/196 (60.71%), Postives = 142/196 (72.45%), Query Frame = 1 Query: 1 GITFGVLATTSGLSIAQAIAMSLLVFTGASQFTAASVIGAGGSPAAALASALLLGARNAFYGISVAKIVPPDTPWWKRLVTAQLTIDESTALAMAQRDPADRYDAFLAGGVSVFVFWNLGTVLGAVGGDAIGDPAALGLDAAFPAGFIALMMPALRHRSGLLAAIAGAGLAATLIPFTRPGIPVLAASLGAVLAFK 588 GI+FGVLA SGL+ AQA AMSLLVFTGASQF VIG+GGS AAAL SALLL ARNA YG++++ ++ P RL+ AQL IDESTA+A AQR PADR F G SVFVFWNLGT+LGA+GGDAIG+P GLDAAFPAGF+AL++P L G + A AG LA L+P G+PVLAA+L +L + Sbjct: 36 GISFGVLAVASGLTAAQACAMSLLVFTGASQFAVVGVIGSGGSTAAALGSALLLAARNAAYGLAMSDVIRGRLP--TRLLGAQLVIDESTAMASAQRTPADRRRGFWLAGASVFVFWNLGTLLGALGGDAIGNPETYGLDAAFPAGFVALVVPHLAKFEGRVVAAAGVALALVLVPVAPVGVPVLAAALAVLLGLR 229
BLAST of mRNA_M-pyrifera_M_contig89109.20657.1 vs. uniprot
Match: A0A7W0KT34_9ACTN (AzlC family ABC transporter permease n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7W0KT34_9ACTN) HSP 1 Score: 204 bits (518), Expect = 8.190e-63 Identity = 119/196 (60.71%), Postives = 141/196 (71.94%), Query Frame = 1 Query: 1 GITFGVLATTSGLSIAQAIAMSLLVFTGASQFTAASVIGAGGSPAAALASALLLGARNAFYGISVAKIVPPDTPWWKRLVTAQLTIDESTALAMAQRDPADRYDAFLAGGVSVFVFWNLGTVLGAVGGDAIGDPAALGLDAAFPAGFIALMMPALRHRSGLLAAIAGAGLAATLIPFTRPGIPVLAASLGAVLAFK 588 GI+FGVLA SGL+ AQA AMSLLVFTGASQF A VIG+GGS AAAL SALLL ARN YG++++ ++ RLV +QL IDESTA+A AQR PAD+ F G+SVFVFWNLGT+LGAVGGDAIGDP GLDAAFPAGF+AL++P LR L A LA L+P PG+PVLAA+L +L + Sbjct: 41 GISFGVLAVASGLTAAQACAMSLLVFTGASQFAAVGVIGSGGSTAAALGSALLLAARNGAYGLTLSDVLRGRLS--TRLVASQLVIDESTAMATAQRSPADQRKGFWIAGLSVFVFWNLGTLLGAVGGDAIGDPERYGLDAAFPAGFVALVVPHLRTFDAKLVAAISVALALMLVPIAPPGVPVLAAALAVLLGLR 234
BLAST of mRNA_M-pyrifera_M_contig89109.20657.1 vs. uniprot
Match: A0A5Q2RJX4_9ACTN (Branched-chain amino acid ABC transporter permease n=1 Tax=Actinomarinicola tropica TaxID=2789776 RepID=A0A5Q2RJX4_9ACTN) HSP 1 Score: 198 bits (503), Expect = 6.220e-61 Identity = 113/194 (58.25%), Postives = 138/194 (71.13%), Query Frame = 1 Query: 1 GITFGVLATTSGLSIAQAIAMSLLVFTGASQFTAASVIGAGGSPAAALASALLLGARNAFYGISVAKIVPPDTPWWKRLVTAQLTIDESTALAMAQRDPADRYDAFLAGGVSVFVFWNLGTVLGAVGGDAIGDPAALGLDAAFPAGFIALMMPALRHRSGLLAAIAGAGLAATLIPFTRPGIPVLAASLGAVLA 582 G+TFGVLATT+GL +AQA MSLLVFTGASQF V+GAGGSP +ALASALLL +RN YG+++ + + +RL A L IDESTA+A+ Q DP AF G+SVF FWNLGT+ GA+GG A+GDPAA GLDAAFPAGFI L P +R R G +AA AGA +A +P G P++ ASLGAV+A Sbjct: 25 GVTFGVLATTAGLPVAQACVMSLLVFTGASQFALVGVVGAGGSPVSALASALLLASRNGIYGLALHRTLQGRL--LRRLGAAHLVIDESTAMALGQEDPEHAERAFWVAGLSVFAFWNLGTLAGALGGTALGDPAAWGLDAAFPAGFIVLAAPHVRSRDGRVAAAAGAAIALVAVPLVPAGAPIVLASLGAVVA 216
BLAST of mRNA_M-pyrifera_M_contig89109.20657.1 vs. uniprot
Match: A0A7X7D4C3_9ACTN (AzlC family ABC transporter permease n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7X7D4C3_9ACTN) HSP 1 Score: 195 bits (495), Expect = 1.470e-59 Identity = 112/196 (57.14%), Postives = 141/196 (71.94%), Query Frame = 1 Query: 1 GITFGVLATTSGLSIAQAIAMSLLVFTGASQFTAASVIGAGGSPAAALASALLLGARNAFYGISVAKIVPPDTPWWKRLVTAQLTIDESTALAMAQRDPADRYDAFLAGGVSVFVFWNLGTVLGAVGGDAIGDPAALGLDAAFPAGFIALMMPALRHRSGLLAAIAGAGLAATLIPFTRPGIPVLAASLGAVLAFK 588 GI+FGVLA SGLS+AQA+AMSLLVFTGASQF A VI +GGS AAL SALLL ARN YG++++ + P+ RL+ + L IDESTA++ AQ D A R F A G+SVFVFWNLGT++GA+GGDAIGDP GLDAAFPAGF+AL++P L G LAA+ G +A L+P G+PVLAA+ ++ + Sbjct: 26 GISFGVLAVASGLSVAQAVAMSLLVFTGASQFAAVGVIESGGSTGAALGSALLLAARNGAYGLALSPTLTGRLPF--RLLASHLVIDESTAMSTAQVDLASRRRGFWAAGISVFVFWNLGTLVGALGGDAIGDPERFGLDAAFPAGFVALVVPHLESIDGRLAALMGTVIALVLVPVAPAGVPVLAAAAAVLIGLR 219
BLAST of mRNA_M-pyrifera_M_contig89109.20657.1 vs. uniprot
Match: A0A6L6R341_9ACTN (Branched-chain amino acid ABC transporter permease n=2 Tax=root TaxID=1 RepID=A0A6L6R341_9ACTN) HSP 1 Score: 186 bits (471), Expect = 5.240e-56 Identity = 109/195 (55.90%), Postives = 134/195 (68.72%), Query Frame = 1 Query: 1 GITFGVLATTSGLSIAQAIAMSLLVFTGASQFTAASVIGAGGSPAAALASALLLGARNAFYGISVAKIVPPDTPWWKRLVTAQLTIDESTALAMAQRD-PADRYDAFLAGGVSVFVFWNLGTVLGAVGGDAIGDPAALGLDAAFPAGFIALMMPALRHRSGLLAAIAGAGLAATLIPFTRPGIPVLAASLGAVLA 582 G++FG ++ SG+S+ Q A+SLL+FTGASQF V+GAGG AA+ +A LLGARN Y + VA + W+RL AQLTIDESTA+A+A D PA AF A G+SVFV WN+GT LG+ G + DPA LGLDAA PAGFIAL+ P LR R+ A+AGA LA LIPFT PGIPVL ++L AV A Sbjct: 29 GLSFGAISVASGVSVWQTQALSLLMFTGASQFALVGVLGAGGGAVAAILTAWLLGARNGLYALHVAPTI--QVGGWRRLAAAQLTIDESTAMAVAHEDSPAASRQAFWATGISVFVLWNIGTALGSFGASLLSDPAMLGLDAAIPAGFIALLWPRLRDRTAWAVALAGAVLALVLIPFTSPGIPVLGSALVAVAA 221
BLAST of mRNA_M-pyrifera_M_contig89109.20657.1 vs. uniprot
Match: A0A2E4RNJ8_9ACTN (Branched-chain amino acid ABC transporter permease n=3 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E4RNJ8_9ACTN) HSP 1 Score: 182 bits (463), Expect = 9.020e-55 Identity = 108/196 (55.10%), Postives = 140/196 (71.43%), Query Frame = 1 Query: 1 GITFGVLATTSGLSIAQAIAMSLLVFTGASQFTAASVIGAGGSPAAALASALLLGARNAFYGISVAKIVPPDTPWWKRLVTAQLTIDESTALAMAQRDPADRYDAFLAGGVSVFVFWNLGTVLGAVGGDAIGDPAALGLDAAFPAGFIALMMPALRHRSGLLAAIAGAGLAATLIPFTRPGIPVLAASLGAVLAFK 588 GITFGV + +G S+A MSLLVFTGASQF+A SV+ +GGS AAALA A LL ARN YG+++++ + KR++ AQ+TIDESTA++ AQ +P AF G+SV+VFWN GT++GA+ G+AI DP GLDAAFPAGF+A++MP LRHRSG AA GA + A IPFT G+P+L AS+G +L K Sbjct: 37 GITFGVGSVAAGGSVAMTCVMSLLVFTGASQFSAVSVVASGGSTAAALAGASLLAARNGVYGLAMSRTLRGSL--LKRILAAQITIDESTAMSTAQEEPQAARVAFWWTGLSVYVFWNAGTLIGALAGNAI-DPEKFGLDAAFPAGFVAMVMPHLRHRSGRRAAGIGALVCAVTIPFTPAGVPILCASVGVLLGVK 229
BLAST of mRNA_M-pyrifera_M_contig89109.20657.1 vs. uniprot
Match: A0A7C7TE04_9ACTN (Branched-chain amino acid ABC transporter permease n=2 Tax=Acidimicrobiia TaxID=84992 RepID=A0A7C7TE04_9ACTN) HSP 1 Score: 182 bits (461), Expect = 1.870e-54 Identity = 104/194 (53.61%), Postives = 135/194 (69.59%), Query Frame = 1 Query: 1 GITFGVLATTSGLSIAQAIAMSLLVFTGASQFTAASVIGAGGSPAAALASALLLGARNAFYGISVAKIVPPDTPWWKRLVTAQLTIDESTALAMAQRDPADRYDAFLAGGVSVFVFWNLGTVLGAVGGDAIGDPAALGLDAAFPAGFIALMMPALRHRSGLLAAIAGAGLAATLIPFTRPGIPVLAASLGAVLA 582 G+TFGVLA+ SGLS +A MSLLVFTGASQF A ++ +GG P +AL +ALLL ARN Y +S+A+ +P T KRL+ AQL IDE+ A++ AQ P + F G+SVF+FWN GT++G G +GDP + GLDAAFPAGF+AL++P L R LAA+ GA +A IP G+PVLAA+LGAV+A Sbjct: 28 GVTFGVLASASGLSAFKATTMSLLVFTGASQFAAIGIVSSGGEPLSALGTALLLAARNGVYSLSIAQTLP--TNGLKRLIAAQLVIDETAAMSKAQPVPEVSQEVFWVTGISVFIFWNAGTLVGVFAGQVVGDPLSWGLDAAFPAGFLALLLPHLSDRRKRLAALLGAVIAVISIPILPQGLPVLAAALGAVVA 219
BLAST of mRNA_M-pyrifera_M_contig89109.20657.1 vs. uniprot
Match: A0A7W0R1I1_9ACTN (AzlC family ABC transporter permease n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7W0R1I1_9ACTN) HSP 1 Score: 181 bits (460), Expect = 2.980e-54 Identity = 103/188 (54.79%), Postives = 135/188 (71.81%), Query Frame = 1 Query: 1 GITFGVLATTSGLSIAQAIAMSLLVFTGASQFTAASVIGAGGSPAAALASALLLGARNAFYGISVAKIVPPDTPWWKRLVTAQLTIDESTALAMAQRDPADRYDAFLAGGVSVFVFWNLGTVLGAVGGDAIGDPAALGLDAAFPAGFIALMMPALRHRSGLLAAIAGAGLAATLIPFTRPGIPVLAAS 564 G+ FGV A ++G S+AQA +SL VFTGASQF+A SV+ AGG+ AAL A+LL ARN YG++++++V P +RLV AQL IDESTA+A AQ D + AF G +++V WNLGT++GA+ G AI DP GLDAAFPAGF+A++ P LRHR GL AA+ GAG+ LIPFT G+P+L A+ Sbjct: 28 GVAFGVGAVSAGGSVAQACVLSLAVFTGASQFSAVSVVAAGGTTGAALGGAILLAARNCVYGLTMSRVVTGSLP--RRLVAAQLVIDESTAMATAQNDRRAQQLAFWCTGATIYVCWNLGTLVGALAGTAI-DPQTYGLDAAFPAGFVAMVAPHLRHRVGLTAAVLGAGICVALIPFTPVGVPILCAA 212
BLAST of mRNA_M-pyrifera_M_contig89109.20657.1 vs. uniprot
Match: A0A2E1GIF0_9EURY (Branched-chain amino acid permease n=5 Tax=cellular organisms TaxID=131567 RepID=A0A2E1GIF0_9EURY) HSP 1 Score: 181 bits (459), Expect = 3.520e-54 Identity = 105/194 (54.12%), Postives = 134/194 (69.07%), Query Frame = 1 Query: 1 GITFGVLATTSGLSIAQAIAMSLLVFTGASQFTAASVIGAGGSPAAALASALLLGARNAFYGISVAKIVPPDTPWWKRLVTAQLTIDESTALAMAQRDPADRYDAFLAGGVSVFVFWNLGTVLGAVGGDAIGDPAALGLDAAFPAGFIALMMPALRHRSGLLAAIAGAGLAATLIPFTRPGIPVLAASLGAVLA 582 G+TFGVLA +G+S A+ +SLLVFTGASQF A V+ AGG P AL +ALLLGARN YG+SV +I+P +KRL+ AQL IDES A++ Q D D +AF G+SVF+FWNLGTV+G + GD +GDP GLDAAFPAGF AL+MP LR + +A+ GA +A +P G+PVLA+ GA +A Sbjct: 28 GVTFGVLANAAGISDLMAVVLSLLVFTGASQFAAVGVVHAGGEPLTALGTALLLGARNGVYGLSVGRILPVGK--FKRLLGAQLVIDESVAVSSLQLDDRDAREAFWVTGLSVFIFWNLGTVVGVLLGDVVGDPRTWGLDAAFPAGFFALLMPHLRSQEKRQSALWGALIALAAVPILPSGLPVLASVGGAFIA 219 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig89109.20657.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig89109.20657.1 >prot_M-pyrifera_M_contig89109.20657.1 ID=prot_M-pyrifera_M_contig89109.20657.1|Name=mRNA_M-pyrifera_M_contig89109.20657.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=196bp GITFGVLATTSGLSIAQAIAMSLLVFTGASQFTAASVIGAGGSPAAALASback to top mRNA from alignment at M-pyrifera_M_contig89109:221..808- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig89109.20657.1 ID=mRNA_M-pyrifera_M_contig89109.20657.1|Name=mRNA_M-pyrifera_M_contig89109.20657.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=588bp|location=Sequence derived from alignment at M-pyrifera_M_contig89109:221..808- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig89109:221..808- >mRNA_M-pyrifera_M_contig89109.20657.1 ID=mRNA_M-pyrifera_M_contig89109.20657.1|Name=mRNA_M-pyrifera_M_contig89109.20657.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1176bp|location=Sequence derived from alignment at M-pyrifera_M_contig89109:221..808- (Macrocystis pyrifera P11B4 male)back to top |