mRNA_M-pyrifera_M_contig88768.20604.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig88768.20604.1
Unique NamemRNA_M-pyrifera_M_contig88768.20604.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig88768.20604.1 vs. uniprot
Match: A0A1S9D171_9GAMM (ABC_transp_aux domain-containing protein n=1 Tax=Chromatiales bacterium USCg_Taylor TaxID=1934255 RepID=A0A1S9D171_9GAMM)

HSP 1 Score: 290 bits (741), Expect = 7.690e-91
Identity = 136/268 (50.75%), Postives = 194/268 (72.39%), Query Frame = 1
Query:    1 SAKQFAGVPEFATYGKRVRDLLEEYEAAADGKIRLLVIDPEPFSEAEDQAVGFGIEPVPMNASGERGFIGLVGTNSIDDEIPIPVLSPERESALEYELTKMVYNLSNPKKRVIGLVSGLPVSSDVSDPQTGRTTRREWGVIALLREIYEVQQLNMETREIAADIDTLIVIHPKEFPANLLYAIDQFVLKGGRAIVFVDPFAEEDRPDRDPNAPMQMPEISSSLEPIFEKWGITMARDKVVTDIDAAVRVSFRSERGPQEVEYLPWLQL 804
            S+K F+G+P    YG R+RDLLEEY A ++G++ L VIDPEPFSEAEDQAV +GI  +P++ +G+RG++GL GTNS DDE  I    PE+E +LEYE+TK++Y L++PKKRVIG++S LP+    +  ++      +W +  +LRE +E++++  E  +I AD+DTL++IHPK     + YAIDQFVLKGG+A+VFVDPFAEEDR    P  P  +P+  S+L  +FEKWG+ +   KV  D+++A+RVS+    GPQ++EYLPWL+L
Sbjct:   55 SSKLFSGIPALQNYGHRIRDLLEEYVAVSNGQLVLNVIDPEPFSEAEDQAVAYGITQLPISTTGDRGYLGLAGTNSTDDEHAIAFFQPEKEQSLEYEITKLLYALAHPKKRVIGVLSSLPLFGGAAQQES------QWTLATMLREAFEIREIGPEALDIGADVDTLLLIHPKTLSEPMRYAIDQFVLKGGKAMVFVDPFAEEDRSAPPPKNPGALPQTDSNLPDLFEKWGLKLVAGKVAGDLESALRVSYNGPAGPQQIEYLPWLRL 316          
BLAST of mRNA_M-pyrifera_M_contig88768.20604.1 vs. uniprot
Match: A0A1Z9UHQ1_9GAMM (ABC_transp_aux domain-containing protein n=3 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A1Z9UHQ1_9GAMM)

HSP 1 Score: 289 bits (740), Expect = 1.860e-90
Identity = 140/271 (51.66%), Postives = 200/271 (73.80%), Query Frame = 1
Query:    1 SAKQFAGVPEFATYGKRVRDLLEEYEAAADGKIRLLVIDPEPFSEAEDQAVGFGIEPVPMNASGERGFIGLVGTNSIDDEIPIPVLSPERESALEYELTKMVYNLSNPKKRVIGLVSGLPVSSDVSDPQTGRTTRREWGVIALLREIYEVQQLNMETREIAADIDTLIVIHPKEFPANLLYAIDQFVLKGGRAIVFVDPFAEEDRPDRDPNAPMQMPEISSSLEPIFEKWGITMARDKVVTDIDAAVRVSFRSERGPQEVEYLPWLQLQGE 813
            S++Q AG+P+ A YGKRV+DLL EY A ++GKI+L VIDP PFSEAED+AVG GI  + +  +GE G++GLV TN+ DD   I VLSP++E+ALEY+LTK++Y L++P KR+IGL++ LP+ S+ +DPQTG+  + +   I  L+E +E+++L ++T  I  +IDTLI++HPK+      YAIDQF++KGG+A+VFVDP AE+D    +P  P  MP++ S L+ IFE  GI +    V+ D  +AVRV+F + RGP+ V+YLPW+QLQGE
Sbjct:   66 SSEQLAGLPQLANYGKRVKDLLNEYVANSNGKIKLYVIDPAPFSEAEDEAVGAGIRQLSLGGNGEVGYLGLVATNTTDDREVIEVLSPDQENALEYDLTKIIYKLNDPTKRIIGLITDLPILSE-TDPQTGQVVKPDLTAITFLKEFHEIKRLPIDTSSIDDEIDTLILVHPKDLSVETQYAIDQFLVKGGKALVFVDPLAEQDPTQPNPETPGVMPQLGSRLDAIFEAVGINLNDSHVIGDPSSAVRVNFNTARGPRXVDYLPWIQLQGE 335          
BLAST of mRNA_M-pyrifera_M_contig88768.20604.1 vs. uniprot
Match: A0A381ZS66_9ZZZZ (ABC_transp_aux domain-containing protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A381ZS66_9ZZZZ)

HSP 1 Score: 258 bits (658), Expect = 1.030e-81
Identity = 131/268 (48.88%), Postives = 178/268 (66.42%), Query Frame = 1
Query:    1 SAKQFAGVPEFATYGKRVRDLLEEYEAAADGKIRLLVIDPEPFSEAEDQAVGFGIEPVPMNASGERGFIGLVGTNSIDDEIPIPVLSPERESALEYELTKMVYNLSNPKKRVIGLVSGLPVSSDVSDPQTGRTTRREWGVIALLREIYEVQQLNMETREIAADIDTLIVIHPKEFPANLLYAIDQFVLKGGRAIVFVDPFAEEDRPDRDPNAPMQMPEISSSLEPIFEKWGITMARDKVVTDIDAAVRVSFRSERGPQEVEYLPWLQL 804
            S K     P  A YG RVRD+LEE+   A GK+ L +I+PE FSEAEDQAV  G+  V +NA+ +R + GLVG NS DDE  IP     RESALEY+LTK++YNL+ P KRVIG+ S LP+       + G TT   W +I  ++E ++V  LN     +   ID L+++HPK+     LYAIDQ++L+GG+AI+F+DP AE+DR   D + P  MP + S L+ I EKWG+ +++ K+V DI+AA+RV   S RGPQE++YLPWL+L
Sbjct:   70 SQKTINDFPLLANYGIRVRDMLEEFATHAQGKLILNIIEPETFSEAEDQAVASGLRTVSVNANSDRVYFGLVGANSTDDEKVIPFFQTNRESALEYDLTKLIYNLAYPDKRVIGVYSQLPIIG-----KKGDTTAPTWTMINAMKEFFKVVNLNENIEALDKKIDVLMLVHPKKLNTETLYAIDQYLLRGGKAIIFLDPLAEQDRTQPDVSTPNVMPILYSYLDEILEKWGLEISKGKIVADINAAMRVQASSPRGPQEIDYLPWLRL 332          
BLAST of mRNA_M-pyrifera_M_contig88768.20604.1 vs. uniprot
Match: A0A351MEX2_9GAMM (ABC transporter n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A351MEX2_9GAMM)

HSP 1 Score: 265 bits (677), Expect = 3.900e-81
Identity = 134/271 (49.45%), Postives = 184/271 (67.90%), Query Frame = 1
Query:    1 SAKQFAGVPEFATYGKRVRDLLEEYEAAADGKIRLLVIDPEPFSEAEDQAVGFGIEPVPMNASGERGFIGLVGTNSIDDEIPIPVLSPERESALEYELTKMVYNLSNPKKRVIGLVSGLPVSSDVSDPQTGRTTRREWGVIALLR---EIYEVQQLNMETREIAADIDTLIVIHPKEFPANLLYAIDQFVLKGGRAIVFVDPFAEEDRPDRDPNAPMQMPEISSSLEPIFEKWGITMARDKVVTDIDAAVRVSFRSERGPQEVEYLPWLQL 804
            S+  FA VP+ ATYG RVR+LL EY  AADGK+ L +IDPEPFSE ED+AV  G++ +P+  +GE G+ GLVG+N  DDE+ IPV  P RE++LEYEL+++++ L++P KR +G++S LP  +             E G  ALLR   E Y++  L  +TR I ADIDTL+VIHPKE      YAIDQF+L+GGRA++FVDP +EED  + DP  P+ +P  SS++  +F  WG+++    +VTD+  A+RV +   RG QEVE+LPWL L
Sbjct:   66 SSALFADVPQIATYGDRVRELLREYVRAADGKLELTIIDPEPFSETEDEAVAAGVQQIPIGQAGEMGYFGLVGSNLTDDELVIPVFQPGREASLEYELSRLIHGLAHPVKRKVGVMSWLPQFA-------------EGGNAALLRLVAEGYDITWLPQDTRNIGADIDTLVVIHPKEVGKLTRYAIDQFILRGGRAMIFVDPLSEEDPVEPDPARPLILPSRSSNMPELFATWGLSLDTSMIVTDVSHAIRVQYAGGRGQQEVEFLPWLAL 323          
BLAST of mRNA_M-pyrifera_M_contig88768.20604.1 vs. uniprot
Match: A0A6L8EGC3_9GAMM (ABC_transp_aux domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A6L8EGC3_9GAMM)

HSP 1 Score: 263 bits (673), Expect = 1.330e-80
Identity = 128/271 (47.23%), Postives = 180/271 (66.42%), Query Frame = 1
Query:    1 SAKQFAGVPEFATYGKRVRDLLEEYEAAADGKIRLLVIDPEPFSEAEDQAVGFGIEPVPMNASGERGFIGLVGTNSIDDEIPIPVLSPERESALEYELTKMVYNLSNPKKRVIGLVSGLPVSSDVSDPQTGRTTRREWGVIALLREIYEVQQLNMETREIAADIDTLIVIHPKEFPANLLYAIDQFVLKGGRAIVFVDPFAEEDRPDRDPNAPMQMPEISSSLEPIFEKWGITMARDKVVTDIDAAVRVSFRSERGPQEVEYLPWLQLQGE 813
            S K  A  P+   Y  RVRDLLEEY A + G I L VI+PEPFSE EDQAV  G+  + +NA+G+R ++GLVG NS DDE  IP     RE ALEY++TK++YNL+NP+KRVIG+++GL +     DP  G   R  W +I ++ E +EV+ +  +T  I  ++D L+V+HPK F    L+AIDQ++L+GG A++FVDP AE D  + DP  P  MP++SS+L  + E WG+ +   ++  DI+ A+RV  +  RGPQE  YLPWL+L+ +
Sbjct:   67 SRKTMADFPQLVNYANRVRDLLEEYAAKSGGNIELSVIEPEPFSEEEDQAVASGLNGIAVNAAGDRAYLGLVGVNSTDDEATIPFFQASREDALEYDITKLIYNLANPEKRVIGVMTGLTL---FGDPAQG--IRERWAIIDVMEEFFEVRNIGADTDYIDENVDVLMVVHPKNFAEEALFAIDQYLLRGGHAMLFVDPLAEGDNAEPDPANPYVMPDMSSNLNIMLEGWGLEVGTGEIAADINLAMRVQTQGARGPQESNYLPWLRLEAD 332          
BLAST of mRNA_M-pyrifera_M_contig88768.20604.1 vs. uniprot
Match: A0A2E6KQC9_9GAMM (ABC_transp_aux domain-containing protein n=1 Tax=Legionellales bacterium TaxID=2026754 RepID=A0A2E6KQC9_9GAMM)

HSP 1 Score: 263 bits (671), Expect = 2.700e-80
Identity = 135/268 (50.37%), Postives = 178/268 (66.42%), Query Frame = 1
Query:    1 SAKQFAGVPEFATYGKRVRDLLEEYEAAADGKIRLLVIDPEPFSEAEDQAVGFGIEPVPMNASGERGFIGLVGTNSIDDEIPIPVLSPERESALEYELTKMVYNLSNPKKRVIGLVSGLPVSSDVSDPQTGRTTRREWGVIALLREIYEVQQLNMETREIAADIDTLIVIHPKEFPANLLYAIDQFVLKGGRAIVFVDPFAEEDRPDRDPNAPMQMPEISSSLEPIFEKWGITMARDKVVTDIDAAVRVSFRSERGPQEVEYLPWLQL 804
            S K     P  A YG RVRD+LEE+ A A+GK+ L +I+PE FSEAEDQAV  G+  V +NA+ +R + GLVG NS DDE  IP     RESALEY+LTK+VYNL+ P KRV+G+ S LP+ S   D  T       W +I  L+E +EV  LN     +   ID L+++HPK+     LY IDQ++LKGG+AI+F+DP AE+DR   D   P  MP + S L+ + EKWGI +A++K+V DI+AA+RV   S RGPQE++YLPWL+L
Sbjct:   70 SQKAMNDFPLLANYGVRVRDMLEEFTAHANGKLILNIIEPETFSEAEDQAVASGLRTVSVNATSDRVYFGLVGANSTDDEKVIPFFQSNRESALEYDLTKLVYNLAYPDKRVVGIYSQLPMISSRGDKTT-----ETWTIINALKEFFEVVNLNENIEALNEKIDVLMLVHPKKIKRENLYIIDQYLLKGGKAIIFLDPLAEQDRTQPDATTPDVMPILYSYLDELLEKWGIEIAKEKIVADINAAMRVQASSPRGPQEIDYLPWLRL 332          
BLAST of mRNA_M-pyrifera_M_contig88768.20604.1 vs. uniprot
Match: A0A1G0JFI4_9GAMM (ABC_transp_aux domain-containing protein n=1 Tax=Gammaproteobacteria bacterium RIFCSPLOWO2_12_47_11 TaxID=1798301 RepID=A0A1G0JFI4_9GAMM)

HSP 1 Score: 262 bits (669), Expect = 6.830e-80
Identity = 127/268 (47.39%), Postives = 178/268 (66.42%), Query Frame = 1
Query:    1 SAKQFAGVPEFATYGKRVRDLLEEYEAAADGKIRLLVIDPEPFSEAEDQAVGFGIEPVPMNASGERGFIGLVGTNSIDDEIPIPVLSPERESALEYELTKMVYNLSNPKKRVIGLVSGLPVSSDVSDPQTGRTTRREWGVIALLREIYEVQQLNMETREIAADIDTLIVIHPKEFPANLLYAIDQFVLKGGRAIVFVDPFAEEDRPDRDPNAPMQMPEISSSLEPIFEKWGITMARDKVVTDIDAAVRVSFRSERGPQEVEYLPWLQL 804
            S K   G+P    Y  RVRD+L+EYE  + GKI L +IDPE FSE EDQAV  G++ + +N +G+R + GLVGTNS DDE  IP     RESALEY++TK++YNL++P K VIG++S LP+  D  DP         W +++ ++E ++V++L+     I  DID L+++HPK       +AIDQF+LKGG+A+VFVDP  E DR   DP  P  MP++ S L  +F++WGI + ++KV  DI+AA+ V  R ERG +E+ YLPWL+L
Sbjct:   67 SQKAMTGLPALTNYAVRVRDMLQEYETNSGGKITLKIIDPESFSEEEDQAVAKGLQGIAVNNAGDRAYFGLVGTNSTDDERIIPFFRSNRESALEYDITKLLYNLASPDKSVIGILSSLPMFGDKDDPNI-----EPWTIVSTMKEFFDVRELHDNPETIDPDIDVLMIVHPKNLKLGTQFAIDQFILKGGKAMVFVDPLGELDRTPPDPKNPGAMPKMDSELPGLFDQWGIELLKEKVAGDINAAMHVQARGERGLREIAYLPWLRL 329          
BLAST of mRNA_M-pyrifera_M_contig88768.20604.1 vs. uniprot
Match: A0A836TSU3_9GAMM (ABC transporter n=1 Tax=Thiotrichaceae bacterium TaxID=2030882 RepID=A0A836TSU3_9GAMM)

HSP 1 Score: 261 bits (668), Expect = 7.690e-80
Identity = 130/261 (49.81%), Postives = 179/261 (68.58%), Query Frame = 1
Query:   25 PEFATYGKRVRDLLEEYEAAADGKIRLLVIDPEPFSEAEDQAVGFGIEPVPMNASGERGFIGLVGTNSIDDEIPIPVLSPERESALEYELTKMVYNLSNPKKRVIGLVSGLPV-SSDVSDPQTGRTTRREWGVIALLREIYEVQQLNMETREIAADIDTLIVIHPKEFPANLLYAIDQFVLKGGRAIVFVDPFAEEDRPDRDPNAPMQMPEISSSLEPIFEKWGITMARDKVVTDIDAAVRVSFRSERGPQEVEYLPWLQL 804
            P  A YG RVRD+LEEY A A G++ L +I+PE FSE+EDQAV  G+  V  N++ ER + GLVGTNS DDE  IP     RESALEY++TKM+YNL+ P KRV+G+ S LP+     +DP         W +I  L+E  EV+ LN +  E+  +ID L+++HPK+     LYAIDQ++L+GG+AI+F+DP AE+D+   DP+ P  MP++ S L  + E WG+ M+++K+V DI AA+RV   S RGPQE++YLPWL+L
Sbjct:   78 PALANYGVRVRDMLEEYAAHAKGQLILNIIEPETFSESEDQAVASGLRTVTANSTSERVYFGLVGTNSTDDEKVIPFFQTNRESALEYDITKMIYNLAYPDKRVVGVYSQLPIIGKSKNDPS--------WTIINALKEFVEVENLNNDIDELDQNIDVLMLVHPKKLDNKTLYAIDQYLLRGGKAIIFIDPLAEQDKSVPDPSQPNIMPKLDSYLSDLLELWGLEMSKEKIVGDISAAMRVQANSPRGPQEIDYLPWLRL 330          
BLAST of mRNA_M-pyrifera_M_contig88768.20604.1 vs. uniprot
Match: A0A849MJW7_9PROT (ABC transporter n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A849MJW7_9PROT)

HSP 1 Score: 259 bits (662), Expect = 6.220e-79
Identity = 126/268 (47.01%), Postives = 180/268 (67.16%), Query Frame = 1
Query:    1 SAKQFAGVPEFATYGKRVRDLLEEYEAAADGKIRLLVIDPEPFSEAEDQAVGFGIEPVPMNASGERGFIGLVGTNSIDDEIPIPVLSPERESALEYELTKMVYNLSNPKKRVIGLVSGLPVSSDVSDPQTGRTTRREWGVIALLREIYEVQQLNMETREIAADIDTLIVIHPKEFPANLLYAIDQFVLKGGRAIVFVDPFAEEDRPDRDPNAPMQMPEISSSLEPIFEKWGITMARDKVVTDIDAAVRVSFRSERGPQEVEYLPWLQL 804
            S K  +  P  A YG RVRD+LEEY A A GK+ L +I+PE FS AEDQAV  G++ V  N + ER + G+VGTNS DDE  IP     RESALEY++TK++YNL+ P KR +G++S LP+  + +D       +  W +I  L+E   V+ L+    ++   ID L+++HPK+F  + LY IDQ++L+GG+AI+F+DP AE+D+   DP  P  MP++ S L  + E+WGI M+++K+V DI AA+RV   S RGPQE++YLPWL++
Sbjct:   70 SQKAMSDFPSLANYGVRVRDMLEEYAAHAGGKLILNIIEPETFSAAEDQAVASGLKTVQANNTSERAYFGMVGTNSTDDEKVIPFFQTNRESALEYDITKLIYNLAYPDKRAVGVISQLPIMGNDTD-----ANQPTWTIINALKEFVVVKDLSQNITDLDEKIDVLMLVHPKKFKNDELYTIDQYLLRGGKAIIFLDPLAEQDKTQPDPAQPNVMPKLDSYLSALLEQWGIEMSKEKIVGDITAAMRVQANSPRGPQEIDYLPWLRM 332          
BLAST of mRNA_M-pyrifera_M_contig88768.20604.1 vs. uniprot
Match: A0A2D7S518_9GAMM (ABC_transp_aux domain-containing protein n=1 Tax=Legionellales bacterium TaxID=2026754 RepID=A0A2D7S518_9GAMM)

HSP 1 Score: 258 bits (660), Expect = 1.200e-78
Identity = 132/268 (49.25%), Postives = 181/268 (67.54%), Query Frame = 1
Query:    1 SAKQFAGVPEFATYGKRVRDLLEEYEAAADGKIRLLVIDPEPFSEAEDQAVGFGIEPVPMNASGERGFIGLVGTNSIDDEIPIPVLSPERESALEYELTKMVYNLSNPKKRVIGLVSGLPVSSDVSDPQTGRTTRREWGVIALLREIYEVQQLNMETREIAADIDTLIVIHPKEFPANLLYAIDQFVLKGGRAIVFVDPFAEEDRPDRDPNAPMQMPEISSSLEPIFEKWGITMARDKVVTDIDAAVRVSFRSERGPQEVEYLPWLQL 804
            S K     P  A YG RVRD+LEE+ A A+GK+ L +I+PE FSEAEDQAV  G+  V +NA+ +R + GLVG NS DDE  IP     RESALEY+LTK++YNL+ P KRV+G+ S LP+ +   D +T +T    W +I  + E ++V  LN     +   +D L+++HPK+     LYAIDQ++LKGG+AI+F+DP AE+DR   D   P  MP + S L+ I EKWG+ +A++K+V DI+AA+RV   S RGPQE++YLPWL+L
Sbjct:   70 SQKAMNDFPLLANYGIRVRDMLEEFAAHANGKLVLNIIEPETFSEAEDQAVASGLRTVSVNATSDRVYFGLVGANSTDDEKIIPFFQSNRESALEYDLTKLIYNLAYPDKRVVGIYSQLPMIA-TKDDKTSKT----WTIINAITEFFDVVDLNENIEALDEKVDVLMLVHPKKINNKTLYAIDQYLLKGGKAIIFLDPLAEQDRAQPDAANPQIMPILYSYLDEILEKWGLGIAKEKIVADINAAMRVQASSPRGPQEIDYLPWLRL 332          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig88768.20604.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1S9D171_9GAMM7.690e-9150.75ABC_transp_aux domain-containing protein n=1 Tax=C... [more]
A0A1Z9UHQ1_9GAMM1.860e-9051.66ABC_transp_aux domain-containing protein n=3 Tax=G... [more]
A0A381ZS66_9ZZZZ1.030e-8148.88ABC_transp_aux domain-containing protein (Fragment... [more]
A0A351MEX2_9GAMM3.900e-8149.45ABC transporter n=1 Tax=Gammaproteobacteria bacter... [more]
A0A6L8EGC3_9GAMM1.330e-8047.23ABC_transp_aux domain-containing protein n=1 Tax=G... [more]
A0A2E6KQC9_9GAMM2.700e-8050.37ABC_transp_aux domain-containing protein n=1 Tax=L... [more]
A0A1G0JFI4_9GAMM6.830e-8047.39ABC_transp_aux domain-containing protein n=1 Tax=G... [more]
A0A836TSU3_9GAMM7.690e-8049.81ABC transporter n=1 Tax=Thiotrichaceae bacterium T... [more]
A0A849MJW7_9PROT6.220e-7947.01ABC transporter n=1 Tax=Proteobacteria bacterium T... [more]
A0A2D7S518_9GAMM1.200e-7849.25ABC_transp_aux domain-containing protein n=1 Tax=L... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig88768contigM-pyrifera_M_contig88768:2..814 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score233.0
Seed ortholog evalue1.6e-58
Seed eggNOG ortholog1207063.P24_15836
KEGG koko:K01992
KEGG TC3.A.1
KEGG ModuleM00254
Hectar predicted targeting categoryother localisation
EggNOG free text desc.ABC-type uncharacterized transport system
EggNOG OGs1MY63@1224,2JRJ2@204441,2U1SX@28211,COG3225@1,COG3225@2
COG Functional cat.N
Best tax levelRhodospirillales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00002,ko02000
Exons1
Model size813
Cds size813
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816797.7325695-CDS-M-pyrifera_M_contig88768:1..8141622816797.7325695-CDS-M-pyrifera_M_contig88768:1..814Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig88768 2..814 +
1692278184.5432146-CDS-M-pyrifera_M_contig88768:1..8141692278184.5432146-CDS-M-pyrifera_M_contig88768:1..814Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig88768 2..814 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig88768.20604.1prot_M-pyrifera_M_contig88768.20604.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig88768 2..814 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig88768.20604.1

>prot_M-pyrifera_M_contig88768.20604.1 ID=prot_M-pyrifera_M_contig88768.20604.1|Name=mRNA_M-pyrifera_M_contig88768.20604.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=271bp
SAKQFAGVPEFATYGKRVRDLLEEYEAAADGKIRLLVIDPEPFSEAEDQA
VGFGIEPVPMNASGERGFIGLVGTNSIDDEIPIPVLSPERESALEYELTK
MVYNLSNPKKRVIGLVSGLPVSSDVSDPQTGRTTRREWGVIALLREIYEV
QQLNMETREIAADIDTLIVIHPKEFPANLLYAIDQFVLKGGRAIVFVDPF
AEEDRPDRDPNAPMQMPEISSSLEPIFEKWGITMARDKVVTDIDAAVRVS
FRSERGPQEVEYLPWLQLQGE
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mRNA from alignment at M-pyrifera_M_contig88768:2..814+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig88768.20604.1 ID=mRNA_M-pyrifera_M_contig88768.20604.1|Name=mRNA_M-pyrifera_M_contig88768.20604.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=813bp|location=Sequence derived from alignment at M-pyrifera_M_contig88768:2..814+ (Macrocystis pyrifera P11B4 male)
TCGGCGAAGCAGTTTGCCGGGGTTCCGGAATTTGCCACTTACGGCAAGCG TGTACGCGATCTGCTCGAGGAATACGAAGCCGCCGCCGACGGCAAGATCC GCCTGCTCGTGATCGATCCGGAGCCGTTCTCGGAAGCGGAGGATCAGGCC GTCGGTTTCGGCATCGAGCCCGTGCCGATGAACGCGAGCGGTGAACGCGG TTTCATCGGGCTTGTCGGGACGAATTCGATTGACGACGAAATCCCGATCC CGGTGCTGAGCCCGGAGCGGGAAAGTGCGCTTGAATACGAGCTCACGAAG ATGGTCTACAACCTGTCGAATCCGAAAAAGCGCGTGATCGGACTCGTGTC AGGTTTGCCGGTTTCATCCGATGTTTCCGATCCACAAACGGGACGCACAA CCCGTCGCGAGTGGGGGGTCATTGCGCTGCTGCGGGAAATCTACGAGGTG CAGCAACTGAACATGGAGACGCGTGAAATCGCCGCCGACATTGATACGCT GATCGTGATTCACCCGAAGGAGTTTCCCGCGAACCTGCTGTATGCGATCG ACCAGTTCGTGCTCAAAGGCGGCCGTGCGATCGTATTCGTCGACCCGTTT GCGGAGGAAGATCGCCCGGACCGCGATCCGAACGCGCCAATGCAAATGCC CGAAATCAGCTCGTCGCTCGAACCGATTTTCGAGAAATGGGGCATCACGA TGGCGCGCGACAAGGTGGTCACGGATATCGACGCGGCCGTACGCGTTTCG TTTCGCAGCGAGCGGGGGCCGCAGGAAGTCGAATACCTGCCATGGCTGCA GCTCCAGGGCGAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig88768:2..814+

>mRNA_M-pyrifera_M_contig88768.20604.1 ID=mRNA_M-pyrifera_M_contig88768.20604.1|Name=mRNA_M-pyrifera_M_contig88768.20604.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1626bp|location=Sequence derived from alignment at M-pyrifera_M_contig88768:2..814+ (Macrocystis pyrifera P11B4 male)
TCGGCGAAGCAGTTTGCCGGGGTTCCGGAATTTGCCACTTACGGCAAGCG
TGTACGCGATCTGCTCGAGGAATACGAAGCCGCCGCCGACGGCAAGATCC
GCCTGCTCGTGATCGATCCGGAGCCGTTCTCGGAAGCGGAGGATCAGGCC
GTCGGTTTCGGCATCGAGCCCGTGCCGATGAACGCGAGCGGTGAACGCGG
TTTCATCGGGCTTGTCGGGACGAATTCGATTGACGACGAAATCCCGATCC
CGGTGCTGAGCCCGGAGCGGGAAAGTGCGCTTGAATACGAGCTCACGAAG
ATGGTCTACAACCTGTCGAATCCGAAAAAGCGCGTGATCGGACTCGTGTC
AGGTTTGCCGGTTTCATCCGATGTTTCCGATCCACAAACGGGACGCACAA
CCCGTCGCGAGTGGGGGGTCATTGCGCTGCTGCGGGAAATCTACGAGGTG
CAGCAACTGAACATGGAGACGCGTGAAATCGCCGCCGACATTGATACGCT
GATCGTGATTCACCCGAAGGAGTTTCCCGCGAACCTGCTGTATGCGATCG
ACCAGTTCGTGCTCAAAGGCGGCCGTGCGATCGTATTCGTCGACCCGTTT
GCGGAGGAAGATCGCCCGGACCGCGATCCGAACGCGCCAATGCAAATGCC
CGAAATCAGCTCGTCGCTCGAACCGATTTTCGAGAAATGGGGCATCACGA
TGGCGCGCGACAAGGTGGTCACGGATATCGACGCGGCCGTACGCGTTTCG
TTTCGCAGCGAGCGGGGGCCGCAGGAAGTCGAATACCTGCCATGGCTGCA
GCTCCAGGGCGAATCGGCGAAGCAGTTTGCCGGGGTTCCGGAATTTGCCA
CTTACGGCAAGCGTGTACGCGATCTGCTCGAGGAATACGAAGCCGCCGCC
GACGGCAAGATCCGCCTGCTCGTGATCGATCCGGAGCCGTTCTCGGAAGC
GGAGGATCAGGCCGTCGGTTTCGGCATCGAGCCCGTGCCGATGAACGCGA
GCGGTGAACGCGGTTTCATCGGGCTTGTCGGGACGAATTCGATTGACGAC
GAAATCCCGATCCCGGTGCTGAGCCCGGAGCGGGAAAGTGCGCTTGAATA
CGAGCTCACGAAGATGGTCTACAACCTGTCGAATCCGAAAAAGCGCGTGA
TCGGACTCGTGTCAGGTTTGCCGGTTTCATCCGATGTTTCCGATCCACAA
ACGGGACGCACAACCCGTCGCGAGTGGGGGGTCATTGCGCTGCTGCGGGA
AATCTACGAGGTGCAGCAACTGAACATGGAGACGCGTGAAATCGCCGCCG
ACATTGATACGCTGATCGTGATTCACCCGAAGGAGTTTCCCGCGAACCTG
CTGTATGCGATCGACCAGTTCGTGCTCAAAGGCGGCCGTGCGATCGTATT
CGTCGACCCGTTTGCGGAGGAAGATCGCCCGGACCGCGATCCGAACGCGC
CAATGCAAATGCCCGAAATCAGCTCGTCGCTCGAACCGATTTTCGAGAAA
TGGGGCATCACGATGGCGCGCGACAAGGTGGTCACGGATATCGACGCGGC
CGTACGCGTTTCGTTTCGCAGCGAGCGGGGGCCGCAGGAAGTCGAATACC
TGCCATGGCTGCAGCTCCAGGGCGAA
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