mRNA_M-pyrifera_M_contig88637.20580.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig88637.20580.1 vs. uniprot
Match: A0A7S1C3B3_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C3B3_9STRA) HSP 1 Score: 142 bits (357), Expect = 1.170e-39 Identity = 84/170 (49.41%), Postives = 103/170 (60.59%), Query Frame = 1 Query: 4 VRLVVWDFDKTLLRIHTFGTHVTVAQARE--RP---LAADFADLATFQALVPALLERGVAVAVASFGEYEVIQTYLDRAVGRGV---FTRDNISTPSVVGGKDGVTLRGGKNLQLQGLLSTMGADGEHGEPIRRHQVLFFDDSRRNILWAKNEGYAFSFSCPRAFTRAEW 489 V+LVVWDFD T+L +H+FG + + RE RP L DF DL F+AL ALLERGV VA+ASFG Y IQ Y D A G G F+RDNI+TP +VGGKDG +L GKNLQL+ L+ E + R +VLFFDD N+ A +GY SF P F+ W Sbjct: 24 VQLVVWDFDLTVLSVHSFGMRIKASDIREGLRPPETLRKDFTDLEFFKALTRALLERGVKVAIASFGVYATIQAYCDFAFGEGESNPFSRDNINTPGMVGGKDGCSLPHGKNLQLRMLV-------EDWAGVARDRVLFFDDDGANVDGAIADGYPHSFHAPEGFSEELW 186
BLAST of mRNA_M-pyrifera_M_contig88637.20580.1 vs. uniprot
Match: A0A7R9XTA9_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7R9XTA9_MICPS) HSP 1 Score: 139 bits (349), Expect = 5.210e-38 Identity = 78/167 (46.71%), Postives = 97/167 (58.08%), Query Frame = 1 Query: 7 RLVVWDFDKTLLRIHTFGTHVTVAQARERPLAADFADLATFQALVPALLERGVAVAVASFGEYEVIQTYLDRAVGRGVFTRDNISTPSVVGGKDGVTLRGGKNLQLQGLLSTM-GADGEHGEPIRRH-----QVLFFDDSRRNILWAKNEGYAFSFSCPRAFTRAEW 489 +L+V+DFD T+LRIH++ V R L AD AD A F+A V R V VAVASFG +E I+ YLDR G GVFTR NI TPS+ GGKDG +RGGK L+ L + + GADG G +VLFFDD +N+ A+ GY S FTR +W Sbjct: 56 KLIVFDFDLTILRIHSWAERVAAEDVPHRDLDADVADAAFFRAFVERARARDVPVAVASFGAFETIKAYLDRVCGEGVFTRANIDTPSMHGGKDGTVVRGGKVPMLRALTTALVGADGGGGTETEAAVRAAPRVLFFDDDEKNVTGAREHGYVMSVLTDACFTREKW 222
BLAST of mRNA_M-pyrifera_M_contig88637.20580.1 vs. uniprot
Match: C1FDL1_MICCC (Uncharacterized protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1FDL1_MICCC) HSP 1 Score: 135 bits (340), Expect = 4.170e-37 Identity = 72/151 (47.68%), Postives = 93/151 (61.59%), Query Frame = 1 Query: 1 RVRLVVWDFDKTLLRIHTFGTHVTVAQARERPLAADFADLATFQALVPALLERGVAVAVASFGEYEVIQTYLDRAVGRGVFTRDNISTPSVVGGKDGVTLRGGKNLQLQGLLSTMGADGEHGEPIRRHQVLFFDDSRRNILWAKNEGYAFS 453 R +L+VWDFD T+L IH++ + +R L D ADLA F+ V LE+G AVA+ASFG+YEVIQ Y+DR VGRGVF R+NI+TPS G KDG LRGGK L+ L M +R+ ++FFDDS N+ A G+ S Sbjct: 14 RPKLIVWDFDLTVLSIHSWAAGIRQKDVADRTLYDDVADLAFFRHFVQRALEQGFAVAIASFGQYEVIQAYMDRIVGRGVFNRENIATPSKFGSKDGRALRGGKVPMLKSLACKMLRASPQELSLRKSDIIFFDDSWDNVCGAIENGFIHS 164
BLAST of mRNA_M-pyrifera_M_contig88637.20580.1 vs. uniprot
Match: A0A482RBN2_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RBN2_9ARCH) HSP 1 Score: 118 bits (295), Expect = 4.340e-30 Identity = 71/144 (49.31%), Postives = 86/144 (59.72%), Query Frame = 1 Query: 4 VRLVVWDFDKTLLRIHTFGTHVTVAQARERPLAADFADLATFQALVPALLERGVAVAVASFGEYEVIQTYLDRAVG-------RGVFTRDNISTPSVVGGKDGVTLRGGKNLQLQGLLSTMGADGEHGEPIRRHQVLFFDDSRR 414 VR VVWDFD T+L +H+FG + R L +DF DL F ALV LL + VA+ASFG YEVIQTY+D A G +FTRDNI TP+ VGG DG +LRGGKN QL+ L + G E Q+LFFD + R Sbjct: 80 VRGVVWDFDLTVLSVHSFGLRLRPQDVPMRNLFSDFRDLPFFIALVHELLHHNIGVAIASFGRYEVIQTYMDLAFGITAGNEAHRIFTRDNIITPASVGGIDGCSLRGGKNSQLELLSAATGWTPE--------QILFFDGTLR 215
BLAST of mRNA_M-pyrifera_M_contig88637.20580.1 vs. uniprot
Match: A0A1Y5IKJ3_OSTTA (Uncharacterized protein n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A1Y5IKJ3_OSTTA) HSP 1 Score: 103 bits (256), Expect = 1.620e-24 Identity = 69/187 (36.90%), Postives = 89/187 (47.59%), Query Frame = 1 Query: 4 VRLVVWDFDKTLLRIHTFGTHVTVAQARERPLAADFADLATFQALVPAL----------------------------LERGVAVAVASFGEYEVIQTYLDRAVGRGVFTRDNISTPSVVGGKDGVTLRGGKNLQLQGLLSTMGADGEHGEPIRRHQVLFFDDSRRNILWAKNEGYAFSFSCPRAFTR 480 V LV+ DFD TLL IH V+ + DF D+ F+A V A +RG+ V +ASFG YEVIQ Y+DRA+G+G TR ISTPSVVG +DG ++ GGKN Q+Q + E R VL FDD RN+ A G+ + P FT+ Sbjct: 4 VELVILDFDLTLLNIHACAERVSAREVETGKRDGDFVDVECFRAFVGACESRGDGGRDGRRTRDETDGTDARRAGSAKKRGIDVRIASFGVYEVIQAYVDRALGKGAMTRREISTPSVVGVRDGCSVSGGKNKQMQKFCEEKYGEKEWKRYANR--VLLFDDDERNVAKAIEGGFR-AVRVPAGFTK 187
BLAST of mRNA_M-pyrifera_M_contig88637.20580.1 vs. uniprot
Match: A0A5A8E965_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8E965_CAFRO) HSP 1 Score: 105 bits (261), Expect = 5.480e-24 Identity = 70/166 (42.17%), Postives = 89/166 (53.61%), Query Frame = 1 Query: 4 VRLVVWDFDKTLLRIHTFGTHVTVAQARERPLAADFADLATFQALVPALLERGVAVAVASFGEYEVIQTYLDRAVGRG---VFTRDNISTPSVVGGKDGVTLRGGKNLQLQGLLSTMG-ADGEHGEPIRRHQVLFFDDSRRNILWAKNEGYAFSFSCPRAFTRAEW 489 ++ VV+DFD T+LRIH+F + R DFADL F+A+ L R V VA+ASFG +VI YL R G +F + I TP+ VG DG L GKN Q+ L+ +MG AD +P R +LFFDD R N A G SF CP+ FT W Sbjct: 136 LKAVVFDFDLTVLRIHSFSARIEPDMIASRAWEKDFADLKAFEAVCKGLAARDVRVAIASFGRKDVITEYLKRVFGDEMDEIFPPEAICTPADVGSVDGHALPDGKNTQIGVLMKSMGIAD----DPRR---ILFFDDDRANCSKAAAIG-VLSFFCPKHFTEPTW 293
BLAST of mRNA_M-pyrifera_M_contig88637.20580.1 vs. uniprot
Match: K8F6Q9_9CHLO (Uncharacterized protein n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8F6Q9_9CHLO) HSP 1 Score: 81.6 bits (200), Expect = 7.720e-16 Identity = 60/196 (30.61%), Postives = 88/196 (44.90%), Query Frame = 1 Query: 1 RVRLVVWDFDKTLLRIHTFGTHVTVAQARERPLAADFADLATFQALVPALLERGVAVAVASFGEYEVIQTYL---------DRAVGRGVFT--RDNISTPSVVGGKDGVTLRGGKNLQLQGLLSTM----------GADGEHGEPIRRHQVLFFDDSRR------------NILWAKNEGYAFSFSCPRAFTRAEW 489 R++LVVWDFD T+LRIH+F ++ R D AD F+A + + ++ + VA+ASFG+ EVI+TYL D + F + +I TP+ VGG DG +++ K+ L L A GE +P+ N+ AK GYA++ P AF R W Sbjct: 20 RIKLVVWDFDMTILRIHSFAKRISALDVPRRDYERDCADANFFRAFLREMKQKSIKVAIASFGKREVIETYLKCLVDGKKGDEDLAEYAFNEKKKSIVTPNDVGGTDGCSMKD-KSRMLDALTKRYVLSMNEEDISSAQGE--DPVESSXXXXXXXXXXXXXXXXXXXXEDNVNAAKKLGYAYAVHTPNAFERESW 212
BLAST of mRNA_M-pyrifera_M_contig88637.20580.1 vs. uniprot
Match: A0A7S1FL05_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1FL05_NOCSC) HSP 1 Score: 79.0 bits (193), Expect = 1.620e-14 Identity = 53/161 (32.92%), Postives = 85/161 (52.80%), Query Frame = 1 Query: 4 VRLVVWDFDKTLLRIHTFGTHVTVAQARERPLAADFADLATFQALVPALLERGVAVAVASFGEYEVIQTYLDRAVG--RGVFTRDNISTPSVVGGKDGVTLRGGKNLQLQGLLSTMGADGEHGEPIRRHQVLFFDDSRRNILWAKNEGYAFSFSCPRAFTR 480 +RLVV+DFDKT+++ H +G + +FA+L+ F+AL+ + ++G AVASFG ++V+ L A+G G+ R TPS G +DG + G KN QL L + G + +Q++ DD +N++ A+ G F+ P TR Sbjct: 98 MRLVVFDFDKTIMKEHIWGKYRNAPLENINFSDEEFANLSRFRALIIGIKQQGHVAAVASFGRHDVVDKALRYALGDDHGIAIR----TPSDFGQQDGSSALGDKNTQLAALAARFG--------VSANQIILIDDDEKNVVAAQKAGTQGLFA-PDGLTR 245
BLAST of mRNA_M-pyrifera_M_contig88637.20580.1 vs. uniprot
Match: A0A7S2INH7_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2INH7_9EUKA) HSP 1 Score: 77.4 bits (189), Expect = 2.230e-14 Identity = 59/164 (35.98%), Postives = 84/164 (51.22%), Query Frame = 1 Query: 1 RVRLVVWDFDKTLLRIHTFGTHVTVAQARERPLAADFADLATFQALVPALLERGVAVAVASFGEYEVIQTYLDRAVGRGV---FTRDNISTPSVVGGKDGVTLRG-GKNLQLQGLLSTMGADGEHGEPIRRHQVLFFDDSRRNILWAKNEGYAFSFSCPRAFTR 480 R +LVVWDFD TL+R+HTF T VTV + +D DL F+ V + +G VA+AS+G E+I YL + V +G+ F + TPS +G DG + GK LQ L+ G +P VLFF+D N+ + G+ + P FT+ Sbjct: 42 RPKLVVWDFDLTLVRVHTFRTGVTVDKVASC-WRSDMYDLDLFRLFVQVVRAQGGTVAIASYGRREIILEYL-KHVFKGMEQMFLPSMVVTPSAIGLPDGTQIPAPGKCRLLQLLMERSGVS----DPST---VLFFEDDELNVDACHDAGFHMTVYVPDGFTQ 196
BLAST of mRNA_M-pyrifera_M_contig88637.20580.1 vs. uniprot
Match: A0A7S4MCT9_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4MCT9_9EUKA) HSP 1 Score: 73.6 bits (179), Expect = 5.170e-13 Identity = 51/147 (34.69%), Postives = 72/147 (48.98%), Query Frame = 1 Query: 7 RLVVWDFDKTLLRIHTFGTHVTVAQARERPLAADFADLATFQALVPALLERGVAVAVASFGEYEVIQTYLDRAVGRGVFTRDNISTPSVVGGKDGVTLRGGKNLQLQGLLSTMGADGEHGE-PIRRHQVLFFDDSRRNILWAKNEGY 444 ++V +DFD+T++++HTF VT R L DFADL FQ +V L + V VAVASFG +VI+TYL R V ++ S + L L +L + + E I R QV+ FDD +N + GY Sbjct: 57 KIVAFDFDQTIVKVHTFFQGVTPNNVHNRSLHEDFADLTLFQEIVQKLQKNNVQVAVASFGYKKVIETYL-----RTVLPHESESI---------IVLSRESCLTKSKMLKKLLTEAESNNLKISRSQVVLFDDDIKNCVSCTKAGY 189 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig88637.20580.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig88637.20580.1 >prot_M-pyrifera_M_contig88637.20580.1 ID=prot_M-pyrifera_M_contig88637.20580.1|Name=mRNA_M-pyrifera_M_contig88637.20580.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=163bp RVRLVVWDFDKTLLRIHTFGTHVTVAQARERPLAADFADLATFQALVPALback to top mRNA from alignment at M-pyrifera_M_contig88637:167..655- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig88637.20580.1 ID=mRNA_M-pyrifera_M_contig88637.20580.1|Name=mRNA_M-pyrifera_M_contig88637.20580.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=489bp|location=Sequence derived from alignment at M-pyrifera_M_contig88637:167..655- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig88637:167..655- >mRNA_M-pyrifera_M_contig88637.20580.1 ID=mRNA_M-pyrifera_M_contig88637.20580.1|Name=mRNA_M-pyrifera_M_contig88637.20580.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=978bp|location=Sequence derived from alignment at M-pyrifera_M_contig88637:167..655- (Macrocystis pyrifera P11B4 male)back to top |