mRNA_M-pyrifera_M_contig8766.20363.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig8766.20363.1 vs. uniprot
Match: A0A6H5L176_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L176_9PHAE) HSP 1 Score: 113 bits (282), Expect = 1.840e-27 Identity = 53/77 (68.83%), Postives = 58/77 (75.32%), Query Frame = 1 Query: 4 PASAAAITALPQETLGADWLSRMTDDEDARQCCICLDEFGVGEVVTRLPCLHLYHAACIKRWLHTSGTCPQCKHRVD 234 PASA AI ALP ETL A L+ + DD RQCCICL+EF GE TRLPCLHLYH+ CI+ WL TSGTCPQCK RVD Sbjct: 532 PASARAIAALPGETLTAGSLAHLKDD--GRQCCICLEEFEAGERATRLPCLHLYHSVCIENWLQTSGTCPQCKFRVD 606
BLAST of mRNA_M-pyrifera_M_contig8766.20363.1 vs. uniprot
Match: D8LR18_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR18_ECTSI) HSP 1 Score: 110 bits (274), Expect = 1.290e-26 Identity = 51/77 (66.23%), Postives = 56/77 (72.73%), Query Frame = 1 Query: 4 PASAAAITALPQETLGADWLSRMTDDEDARQCCICLDEFGVGEVVTRLPCLHLYHAACIKRWLHTSGTCPQCKHRVD 234 PASA AI ALP E L A L+ + DD RQCCICL++F GE TRLPCLHLYH CI+ WL TSGTCPQCK RVD Sbjct: 399 PASARAIAALPGEALTAGALAHLKDD--GRQCCICLEDFEAGEKATRLPCLHLYHTVCIENWLQTSGTCPQCKFRVD 473
BLAST of mRNA_M-pyrifera_M_contig8766.20363.1 vs. uniprot
Match: A0A7S1MR62_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1MR62_ALECA) HSP 1 Score: 75.1 bits (183), Expect = 2.690e-15 Identity = 38/74 (51.35%), Postives = 46/74 (62.16%), Query Frame = 1 Query: 4 PASAAAITALPQETL-GADWLSRMTDDEDARQCCICLDEFGVGEVVTRLPCLHLYHAACIKRWLHTSGTCPQCK 222 PA AA I ALP L GAD + + +C ICL+EFG G+ V LPCLHLYH CI++WL T +CP CK Sbjct: 80 PAQAADIDALPTRKLAGADNVGEQS------KCLICLEEFGEGDDVKTLPCLHLYHQRCIEQWLGTDNSCPVCK 147
BLAST of mRNA_M-pyrifera_M_contig8766.20363.1 vs. uniprot
Match: A0A7S1MQQ6_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1MQQ6_ALECA) HSP 1 Score: 75.1 bits (183), Expect = 2.690e-15 Identity = 37/74 (50.00%), Postives = 46/74 (62.16%), Query Frame = 1 Query: 4 PASAAAITALPQETL-GADWLSRMTDDEDARQCCICLDEFGVGEVVTRLPCLHLYHAACIKRWLHTSGTCPQCK 222 PA AA I ALP L GA+ L + +C ICL+EFG G+ VT LPCLH YH C+++WL T +CP CK Sbjct: 80 PAHAADINALPNRKLAGAENLGEQS------KCLICLEEFGDGDDVTTLPCLHFYHQRCVEQWLGTDNSCPVCK 147
BLAST of mRNA_M-pyrifera_M_contig8766.20363.1 vs. uniprot
Match: A0A6A6NXI4_9PEZI (RING-type domain-containing protein n=1 Tax=Lineolata rhizophorae TaxID=578093 RepID=A0A6A6NXI4_9PEZI) HSP 1 Score: 76.6 bits (187), Expect = 1.470e-14 Identity = 34/77 (44.16%), Postives = 45/77 (58.44%), Query Frame = 1 Query: 4 PASAAAITALPQETLGADWLSRMTDDEDARQCCICLDEFGVGEVVTRLPCLHLYHAACIKRWLHTSGTCPQCKHRVD 234 PASA A+ LP + + A L D +C IC+DE G+GE VT LPC H +H +CIK WL TCP C+ ++ Sbjct: 330 PASAEAMARLPTKPVDASMLG----DNGKAECSICMDEVGLGEQVTELPCRHWFHGSCIKAWLGEHDTCPHCRQGIE 402
BLAST of mRNA_M-pyrifera_M_contig8766.20363.1 vs. uniprot
Match: A0A7L2T9M1_POMRU (PJA2 ligase (Fragment) n=1 Tax=Pomatostomus ruficeps TaxID=9176 RepID=A0A7L2T9M1_POMRU) HSP 1 Score: 74.3 bits (181), Expect = 9.660e-14 Identity = 36/75 (48.00%), Postives = 43/75 (57.33%), Query Frame = 1 Query: 4 PASAAAITALPQETLGADWLSRMTDDEDARQCC-ICLDEFGVGEVVTRLPCLHLYHAACIKRWLHTSGTCPQCKH 225 PA+ I LPQ T+ D+ + QCC IC E+ GEVVT LPC HL+H CI WL SGTCP C+H Sbjct: 591 PATKETIDCLPQITIKGDYTGQ-------EQCCTICCSEYVEGEVVTELPCHHLFHKPCITPWLQRSGTCPVCRH 658
BLAST of mRNA_M-pyrifera_M_contig8766.20363.1 vs. uniprot
Match: A0A7L0C1K6_9AVES (PJA2 ligase (Fragment) n=4 Tax=Accipitrinae TaxID=8955 RepID=A0A7L0C1K6_9AVES) HSP 1 Score: 73.9 bits (180), Expect = 1.320e-13 Identity = 36/79 (45.57%), Postives = 47/79 (59.49%), Query Frame = 1 Query: 4 PASAAAITALPQETLGADWLSRMTDDEDAR-QCC-ICLDEFGVGEVVTRLPCLHLYHAACIKRWLHTSGTCPQCKHRVD 234 PA+ I LPQ T+ TDD+D + QCC IC E+ E++T LPC HL+H CI WL SGTCP C+H ++ Sbjct: 594 PATKETIDCLPQITV--------TDDQDGQEQCCTICCSEYVKDEIITELPCHHLFHKTCITLWLQKSGTCPICRHVLE 664
BLAST of mRNA_M-pyrifera_M_contig8766.20363.1 vs. uniprot
Match: A0A8C4WXD9_EPTBU (RING-type domain-containing protein n=2 Tax=Eptatretus burgeri TaxID=7764 RepID=A0A8C4WXD9_EPTBU) HSP 1 Score: 73.6 bits (179), Expect = 1.750e-13 Identity = 37/78 (47.44%), Postives = 45/78 (57.69%), Query Frame = 1 Query: 4 PASAAAITALPQETLGADWLSRMTDDEDARQCCICLDEFGVGEVVTRLPCLHLYHAACIKRWLHTSGTCPQCK-HRVD 234 PAS I +LPQ G L++ + C IC +EF G+ VT LPCLHL+H ACI WL S TCP C+ H VD Sbjct: 397 PASEDLIHSLPQVYFGQAHLAQN------QNCIICCNEFNFGDAVTNLPCLHLFHTACIDSWLQRSATCPVCRYHLVD 468
BLAST of mRNA_M-pyrifera_M_contig8766.20363.1 vs. uniprot
Match: A0A8C4WXM4_EPTBU (RING-type domain-containing protein n=2 Tax=Eptatretus burgeri TaxID=7764 RepID=A0A8C4WXM4_EPTBU) HSP 1 Score: 73.6 bits (179), Expect = 1.750e-13 Identity = 37/78 (47.44%), Postives = 45/78 (57.69%), Query Frame = 1 Query: 4 PASAAAITALPQETLGADWLSRMTDDEDARQCCICLDEFGVGEVVTRLPCLHLYHAACIKRWLHTSGTCPQCK-HRVD 234 PAS I +LPQ G L++ + C IC +EF G+ VT LPCLHL+H ACI WL S TCP C+ H VD Sbjct: 407 PASEDLIHSLPQVYFGQAHLAQN------QNCIICCNEFNFGDAVTNLPCLHLFHTACIDSWLQRSATCPVCRYHLVD 478
BLAST of mRNA_M-pyrifera_M_contig8766.20363.1 vs. uniprot
Match: A0A835PZV1_VANPL (RING-type domain-containing protein n=1 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835PZV1_VANPL) HSP 1 Score: 70.1 bits (170), Expect = 2.100e-13 Identity = 28/68 (41.18%), Postives = 41/68 (60.29%), Query Frame = 1 Query: 40 ETLGADWLSRMTDDEDARQ---CCICLDEFGVGEVVTRLPCLHLYHAACIKRWLHTSGTCPQCKHRVD 234 E L +S +T +E Q C ICL++ GE+V R PCLH +HA C++RW +G+CP C+ +D Sbjct: 83 ELLSEKRMSLVTTEEAFEQEESCAICLEDVSAGELVARTPCLHRFHATCLRRWFENAGSCPLCRFSID 150 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8766.20363.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig8766.20363.1 >prot_M-pyrifera_M_contig8766.20363.1 ID=prot_M-pyrifera_M_contig8766.20363.1|Name=mRNA_M-pyrifera_M_contig8766.20363.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=79bp RPASAAAITALPQETLGADWLSRMTDDEDARQCCICLDEFGVGEVVTRLPback to top mRNA from alignment at M-pyrifera_M_contig8766:3586..3822- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig8766.20363.1 ID=mRNA_M-pyrifera_M_contig8766.20363.1|Name=mRNA_M-pyrifera_M_contig8766.20363.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=237bp|location=Sequence derived from alignment at M-pyrifera_M_contig8766:3586..3822- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig8766:3586..3822- >mRNA_M-pyrifera_M_contig8766.20363.1 ID=mRNA_M-pyrifera_M_contig8766.20363.1|Name=mRNA_M-pyrifera_M_contig8766.20363.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=474bp|location=Sequence derived from alignment at M-pyrifera_M_contig8766:3586..3822- (Macrocystis pyrifera P11B4 male)back to top |