mRNA_M-pyrifera_M_contig8743.20318.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig8743.20318.1 vs. uniprot
Match: A0A6H5LDQ8_9PHAE (RRM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDQ8_9PHAE) HSP 1 Score: 193 bits (491), Expect = 7.020e-59 Identity = 97/103 (94.17%), Postives = 99/103 (96.12%), Query Frame = 2 Query: 2 GNSGKMYTEGWVEFEDKKIARAIAESLNNTLIGGKKRNYYHDDIWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARYVELVESGRSFNKMEER 310 GNSGK Y EGWVEFEDKKIARA AESLNNTLIGG+KRNYYHDD+WNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARYVELVESGRSF KMEER Sbjct: 151 GNSGKRYAEGWVEFEDKKIARATAESLNNTLIGGRKRNYYHDDMWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARYVELVESGRSFAKMEER 253
BLAST of mRNA_M-pyrifera_M_contig8743.20318.1 vs. uniprot
Match: A0A7S3US98_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3US98_HETAK) HSP 1 Score: 154 bits (390), Expect = 1.030e-45 Identity = 72/107 (67.29%), Postives = 90/107 (84.11%), Query Frame = 2 Query: 2 GNSGKMYTEGWVEFEDKKIARAIAESLNNTLIGGKKRNYYHDDIWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARYVELVESGRSFNKMEERKRKR 322 GN+GK Y EGWVEF+DKK A+ +A+ LNN IGGKKR++Y +DIWN+KYL+KFKW HLTEK+AYE+RVR QKLRLE MQAK+ENA Y+ELVE G+ KMEE++ K+ Sbjct: 24 GNTGKKYVEGWVEFDDKKTAKLVAQHLNNKQIGGKKRHFYREDIWNIKYLKKFKWRHLTEKIAYEKRVREQKLRLEMMQAKKENAEYIELVEKGKKIQKMEEKRAKK 130
BLAST of mRNA_M-pyrifera_M_contig8743.20318.1 vs. uniprot
Match: D7FRK9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRK9_ECTSI) HSP 1 Score: 154 bits (390), Expect = 1.930e-45 Identity = 79/83 (95.18%), Postives = 81/83 (97.59%), Query Frame = 2 Query: 62 RAIAESLNNTLIGGKKRNYYHDDIWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARYVELVESGRSFNKMEER 310 RA AESLNNTLIGG+KRNYYHDD+WNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARYVELVESGRSF KMEER Sbjct: 15 RATAESLNNTLIGGRKRNYYHDDMWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARYVELVESGRSFAKMEER 97
BLAST of mRNA_M-pyrifera_M_contig8743.20318.1 vs. uniprot
Match: A0A8J9SXP0_PHATR (Hypothetical protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9SXP0_PHATR) HSP 1 Score: 146 bits (368), Expect = 8.380e-43 Identity = 69/107 (64.49%), Postives = 89/107 (83.18%), Query Frame = 2 Query: 2 GNSGKMYTEGWVEFEDKKIARAIAESLNNTLIGGKKRNYYHDDIWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARYVELVESGRSFNKMEERKRKR 322 GN+ K Y EGW+EFE KK+A+ +A ++NNT + G+KR+++HDD+WNLKYL KF+W HLTEKVAYERRVR QKLRLETMQA+RE A Y LVE+G+ +++E RKRKR Sbjct: 48 GNASKRYKEGWIEFESKKVAKHVAANMNNTPMSGQKRSHHHDDLWNLKYLSKFQWSHLTEKVAYERRVREQKLRLETMQARRETASYKHLVETGKKVDRIEARKRKR 154
BLAST of mRNA_M-pyrifera_M_contig8743.20318.1 vs. uniprot
Match: H3HB09_PHYRM (RRM domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HB09_PHYRM) HSP 1 Score: 149 bits (375), Expect = 1.020e-42 Identity = 68/110 (61.82%), Postives = 89/110 (80.91%), Query Frame = 2 Query: 2 GNSGKMYTEGWVEFEDKKIARAIAESLNNTLIGGKKRNYYHDDIWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARYVELVESGRSFNKMEERKRKRREH 331 GN + YTEGW+EFEDKK+A+ +A+ LN TLIGG+KR+YYHDD+WNLKYL+ FKWDHLTEK+AYE R+R QKLR+E QAK+EN Y+E V+ + F KM+ RK +++H Sbjct: 84 GNRRQKYTEGWLEFEDKKVAKRVAKMLNTTLIGGRKRDYYHDDMWNLKYLKGFKWDHLTEKIAYENRIRDQKLRMEIAQAKKENEAYLERVDQSKQFEKMDARKADKKQH 193
BLAST of mRNA_M-pyrifera_M_contig8743.20318.1 vs. uniprot
Match: A0A5D6Y296_9STRA (RRM domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y296_9STRA) HSP 1 Score: 148 bits (374), Expect = 1.230e-42 Identity = 70/104 (67.31%), Postives = 83/104 (79.81%), Query Frame = 2 Query: 2 GNSGKMYTEGWVEFEDKKIARAIAESLNNTLIGGKKRNYYHDDIWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARYVELVESGRSFNKMEERK 313 GN + YTEGW+EFEDKK+AR +A LN IGG+KR+YYHDDIWNLKYL+ FKWDHLTEK+AYE R+R QKLRLE QAK+EN Y++ VE + F KMEERK Sbjct: 85 GNRKQSYTEGWIEFEDKKVARQVAAVLNTRQIGGRKRDYYHDDIWNLKYLKGFKWDHLTEKIAYENRIRDQKLRLEIAQAKKENEAYLDKVEQSKQFEKMEERK 188
BLAST of mRNA_M-pyrifera_M_contig8743.20318.1 vs. uniprot
Match: K3WDP5_GLOUD (RRM domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WDP5_GLOUD) HSP 1 Score: 148 bits (374), Expect = 2.160e-42 Identity = 69/104 (66.35%), Postives = 84/104 (80.77%), Query Frame = 2 Query: 2 GNSGKMYTEGWVEFEDKKIARAIAESLNNTLIGGKKRNYYHDDIWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARYVELVESGRSFNKMEERK 313 GN + YTEGW+EFEDKK+A+ +A+ LN IGG+KR+YYHDDIWNLKYL+ FKWDHLTEK+AYE R+R QKLR+E QAK+EN Y+E VE + F KMEERK Sbjct: 99 GNRKQSYTEGWIEFEDKKVAKQVAKVLNTRQIGGRKRDYYHDDIWNLKYLKGFKWDHLTEKIAYENRIRDQKLRMEIAQAKKENEAYLEKVEQSKKFEKMEERK 202
BLAST of mRNA_M-pyrifera_M_contig8743.20318.1 vs. uniprot
Match: A0A3M6VQV5_9STRA (RRM domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VQV5_9STRA) HSP 1 Score: 147 bits (372), Expect = 2.530e-42 Identity = 68/104 (65.38%), Postives = 84/104 (80.77%), Query Frame = 2 Query: 2 GNSGKMYTEGWVEFEDKKIARAIAESLNNTLIGGKKRNYYHDDIWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARYVELVESGRSFNKMEERK 313 GN + YTEGW+EFEDKK+A+ +A+ LN T IGG+KR+YYHDDIWNLKYL+ FKWDHLTEK+AYE R+R QKLR+E QAK+EN Y+E V+ + F KME RK Sbjct: 81 GNRRQKYTEGWIEFEDKKVAKRVAKMLNTTQIGGRKRDYYHDDIWNLKYLKGFKWDHLTEKIAYENRIRDQKLRMEIAQAKKENEAYLERVDQSKQFEKMEARK 184
BLAST of mRNA_M-pyrifera_M_contig8743.20318.1 vs. uniprot
Match: A0A2D4BVT2_PYTIN (Pre-rRNA-processing protein ESF2 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BVT2_PYTIN) HSP 1 Score: 146 bits (369), Expect = 8.900e-42 Identity = 68/104 (65.38%), Postives = 83/104 (79.81%), Query Frame = 2 Query: 2 GNSGKMYTEGWVEFEDKKIARAIAESLNNTLIGGKKRNYYHDDIWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARYVELVESGRSFNKMEERK 313 GN YTEGW+EFEDKK+A+++A LN IGG+KR+YYHDD+WNLKYL+ FKWDHLTEK+AYE R+R QKLR+E QAK+EN Y+E VE + F KMEERK Sbjct: 93 GNRKTKYTEGWIEFEDKKVAKSVAAMLNTKQIGGRKRDYYHDDMWNLKYLKGFKWDHLTEKIAYENRIREQKLRMEIAQAKKENDAYLERVEQSKQFQKMEERK 196
BLAST of mRNA_M-pyrifera_M_contig8743.20318.1 vs. uniprot
Match: A0A0P1B2U2_PLAHL (Pre-rrna-processing protein esf2 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B2U2_PLAHL) HSP 1 Score: 146 bits (368), Expect = 9.600e-42 Identity = 68/104 (65.38%), Postives = 83/104 (79.81%), Query Frame = 2 Query: 2 GNSGKMYTEGWVEFEDKKIARAIAESLNNTLIGGKKRNYYHDDIWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARYVELVESGRSFNKMEERK 313 GN YTEGW+EFEDKK+A+ +A+ LN T IGG+KR+YYHDD+WNLKYL+ FKWDHLTEK+AYE R+R QKLR+E QAK+EN Y+E VE + KMEERK Sbjct: 79 GNRRMKYTEGWIEFEDKKVAKRVAKMLNTTQIGGRKRDYYHDDMWNLKYLKGFKWDHLTEKIAYENRIRDQKLRMEIAQAKKENEVYLERVEQSKQLEKMEERK 182 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8743.20318.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig8743.20318.1 >prot_M-pyrifera_M_contig8743.20318.1 ID=prot_M-pyrifera_M_contig8743.20318.1|Name=mRNA_M-pyrifera_M_contig8743.20318.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=105bp MYTEGWVEFEDKKIARAIAESLNNTLIGGKKRNYYHDDIWNLKYLRKFKWback to top mRNA from alignment at M-pyrifera_M_contig8743:5447..7523+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig8743.20318.1 ID=mRNA_M-pyrifera_M_contig8743.20318.1|Name=mRNA_M-pyrifera_M_contig8743.20318.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=2077bp|location=Sequence derived from alignment at M-pyrifera_M_contig8743:5447..7523+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig8743:5447..7523+ >mRNA_M-pyrifera_M_contig8743.20318.1 ID=mRNA_M-pyrifera_M_contig8743.20318.1|Name=mRNA_M-pyrifera_M_contig8743.20318.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=630bp|location=Sequence derived from alignment at M-pyrifera_M_contig8743:5447..7523+ (Macrocystis pyrifera P11B4 male)back to top |