mRNA_M-pyrifera_M_contig8706.20244.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig8706.20244.1 vs. uniprot
Match: D7FJU6_ECTSI (NAD(P)-bd_dom domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJU6_ECTSI) HSP 1 Score: 381 bits (979), Expect = 4.490e-127 Identity = 185/235 (78.72%), Postives = 208/235 (88.51%), Query Frame = 3 Query: 3 QLVAAGCTVIALSRKGVPENGGVWTKSVKWVEANAVNQDLYRAELRQTDTVVSCVGGFGKTDAYMGLINGEANIKLVEAAADAGVKQFVFMSVHDYKAPSFVKRVGYFDGKRRAEKVVGELFGDKGVILKPAFVYGERSVKLTGPNGRERTLNVPLQRLGGPLARLAGTGVAKKIAESGLPLADVAWTQPLSVEAVGKSAVRCCLGGVENLGS-RSKDSGDAVVLRVRDIAQMVA 704 +LVAAGC VIALSRKG P NGG W KSVKWVE NA+NQDLYRAELR++DTVVSCVGGFGKTDAYMGL+NGE NIKL EAAADAGVKQFVF+SVHDYKAPS VK+VGYFDGKRRAEK++GELFG KGVILKPAF+YG R VKLTGP G+ERT+N+PLQR+GGPLA++ TG+ K+IA SGLPLADVAWTQPLS V KSAVRCCL G ++LG R KDSGDAVVL+V+D+AQM A Sbjct: 70 KLVAAGCNVIALSRKGAPANGGSWVKSVKWVEGNALNQDLYRAELRRSDTVVSCVGGFGKTDAYMGLVNGETNIKLAEAAADAGVKQFVFVSVHDYKAPSAVKKVGYFDGKRRAEKLIGELFGAKGVILKPAFIYGSRDVKLTGPKGKERTVNIPLQRVGGPLAKITSTGIGKRIAGSGLPLADVAWTQPLSTAEVAKSAVRCCLEGTDSLGGGRGKDSGDAVVLKVQDMAQMTA 304
BLAST of mRNA_M-pyrifera_M_contig8706.20244.1 vs. uniprot
Match: A0A6H5L1C5_9PHAE (NAD(P)-bd_dom domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1C5_9PHAE) HSP 1 Score: 379 bits (972), Expect = 3.640e-125 Identity = 186/238 (78.15%), Postives = 208/238 (87.39%), Query Frame = 3 Query: 3 QLVAAGCTVIALSRKGVPENGGVWTKSVKWVEANAVNQDLYRAELRQTDTVVSCVGGFGKTDAYMGLINGEANIKLVEAAADAGVKQFVFMSVHDYKAPSFVKRVGYFDGKRRAEKVVGELFGDKGVILKPAFVYGERSVKLTGPNGRERTLNVPLQRLGGPLARLAGTGVAKKIAE---SGLPLADVAWTQPLSVEAVGKSAVRCCLGGVENLGS-RSKDSGDAVVLRVRDIAQMVA 704 QLVAAGC VIALSRKG P NGG W KSVKWVE NA+NQDLYRAELR++DTVVSCVGGFGKTDAYMGL+NGE NIKL EAAADAGVKQFVF+SVHDYKAPS VK+VGYFDGKRRAEK++GELFG KGVILKPAF+YG R VKLTGP G+ERT+N+PLQR+GGPLA++ TG+ K+IA SGLPLADVAWTQPLS V KSAVRCCL G ++LG R KDSGDAVVL+V+D+AQM A Sbjct: 124 QLVAAGCNVIALSRKGAPANGGSWVKSVKWVEGNALNQDLYRAELRRSDTVVSCVGGFGKTDAYMGLVNGETNIKLAEAAADAGVKQFVFVSVHDYKAPSVVKKVGYFDGKRRAEKLIGELFGAKGVILKPAFIYGSRDVKLTGPKGKERTVNIPLQRVGGPLAKITSTGIGKRIASESRSGLPLADVAWTQPLSTAEVAKSAVRCCLEGTDSLGGGRGKDSGDAVVLKVQDMAQMTA 361
BLAST of mRNA_M-pyrifera_M_contig8706.20244.1 vs. uniprot
Match: A0A835ZDA8_9STRA (NAD(P)-bd_dom domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDA8_9STRA) HSP 1 Score: 208 bits (529), Expect = 1.490e-59 Identity = 109/237 (45.99%), Postives = 152/237 (64.14%), Query Frame = 3 Query: 3 QLVAAGCTVIALSRKGV--PENGGVWTKSVK-WVEANAVNQDLYRAELRQTDTVVSCVGGFGKTDAYMGLINGEANIKLVEAAADAGVKQFVFMSVHDYKAPSFVKRVGYFDGKRRAEKVVGELFGDKGVILKPAFVYGERSVKLTGPNGRER-TLNVPLQRLGGPLARLAGTGVAKKIAESGLPLADVAWTQPLSVEAVGKSAVRCCLG-GVENLGSRSKDSGDAVVLRVRDIAQM 698 +L+ G V+ LSR G P W V+ W+ A+A++ D Y++ L D+VVSC+GGFG TD+Y+ L+NG+ IKL EAA +AGV +FVF+SVH+YK P+ V R GYF GKRRAE +GEL+G G +L+PAF+YG++ V T P E+ T+ +PL+++G P A++ K++A SGLPLAD +TQPLSV+ V +A RC G + R A VL V DI +M Sbjct: 75 ELIKQGAKVVGLSRSGKRKPTEAEWWEDDVEAWIAASALDVDSYKSALEGCDSVVSCIGGFGATDSYLNLVNGDCTIKLCEAAKEAGVPRFVFVSVHEYKLPTAVARTGYFAGKRRAEARIGELYGADGYVLRPAFIYGQKKVTFTNPFSYEKKTVTLPLEKIGEPAAKITAMNPIKRLANSGLPLADTVYTQPLSVDEVAFAASRCAAGTATAGVTVRLPSETGANVLTVDDIKRM 311
BLAST of mRNA_M-pyrifera_M_contig8706.20244.1 vs. uniprot
Match: A0A061SCL0_9CHLO (Nad-binding protein n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SCL0_9CHLO) HSP 1 Score: 135 bits (341), Expect = 1.250e-32 Identity = 80/202 (39.60%), Postives = 114/202 (56.44%), Query Frame = 3 Query: 3 QLVAAGCTVIALSRKGVPENGGV-WTKSVKWVEANAVNQDLYRAELRQTDTVVSCVGGFGKTDAYMGLINGEANIKLVEAAADAGVKQFVFMSVHDYKAPSFVKRVGYFDGKRRAEKVVGELFGDKGVILKPAFVYGERSVKLTGPNGRERTLNVPLQRLGGPLARLAGTGVAKKIAESGLPLADVAWTQPLSVEAVGKSAV 605 Q ++AG V A++R G P + W V W+ NA+ D Y L V+ C+GGFG T+ M +NGEAN++ +EAAA G+ + VF+S HDYK PSFV GYF GKR E ++ L+ + GVIL+P F++G R V T +PL G P+ ++ +K ++E LPLA + P+SVE + K AV Sbjct: 78 QAISAGLQVTAIARSGRPAHQTEDWCNEVTWISGNALEPDSYSEALEGAQGVICCIGGFG-TNEQMLQVNGEANMRALEAAAGRGIPRAVFISAHDYKFPSFVLS-GYFQGKRNVEDLMRSLYPESGVILRPGFIHGTRMVGSTP---------IPLGLFGQPIEKVLEFMPSKSLSE--LPLAGAGFVPPVSVEKLAKVAV 266
BLAST of mRNA_M-pyrifera_M_contig8706.20244.1 vs. uniprot
Match: A0A7S0MZM9_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0MZM9_9CHLO) HSP 1 Score: 133 bits (334), Expect = 2.700e-31 Identity = 81/204 (39.71%), Postives = 113/204 (55.39%), Query Frame = 3 Query: 18 GCTVIALSRKGVPENGGVWTKSVKWVEANAVNQDLYRAELRQTDTVVSCVGGFGKTDAYMGLINGEANIKLVEAAADAGVKQFVFMSVHDYKAPSFVK-RVGYFDGKRRAEKVVGELFGDKGVILKPAFVYGERSVKLTGPNGRERTLNVPLQRLGGPLAR---LAGTGVAKKIAES--GLPLADVAWTQPLSVEAVGKSAVRC 611 G TV++++R G P W V WV A+ ++ + L V+SC+GGF T A M I G+A I V AA AGV +FVF+SVHDY P F+K + GYF GK+RAE V F + G +L+P F+YG R V G + VPL +G P+ + LA +AE+ LP +DV P+SVE+V +A++C Sbjct: 111 GMTVVSINRSGPPSINEPWVDRVDWVNADVFDESSWSYTLPGAAAVISCIGGFATTAADMERICGDATIAGVGAAVAAGVPRFVFVSVHDYNIPDFLKDQSGYFSGKKRAEDAVLLQFPEGGAVLRPGFIYGSRLVPQLG-------VTVPLNLVGEPVQKILSLADQSPLGALAEALKPLPASDVLLAPPVSVESVAATALKC 307
BLAST of mRNA_M-pyrifera_M_contig8706.20244.1 vs. uniprot
Match: A0A388KKI2_CHABU (NAD(P)-bd_dom domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KKI2_CHABU) HSP 1 Score: 132 bits (332), Expect = 6.920e-30 Identity = 77/202 (38.12%), Postives = 112/202 (55.45%), Query Frame = 3 Query: 3 QLVAAGCTVIALSRKGVPENGGVWTKSVKWVEANAVNQDLYRAELRQTDTVVSCVGGFGKTDAYMGLINGEANIKLVEAAADAGVKQFVFMSVHDYKAPSFVKRVGYFDGKRRAEKVVGELFGDKGVILKPAFVYGERSVKLTGPNGRERTLNVPLQRLGGPLARLAGTGVAKKIAESGLPLADVAWTQPLSVEAVGKSAVR 608 + ++ G V +++R G P W K V+WV + + D++R +LR VVSC+GGFG D M ING AN+K V+AAA+ VK+FV +S H + P+ + R GY++GKR AE+ V F G+IL+P F++G R+V L VPL +GGPL + + S LP+ P+ AV K+AVR Sbjct: 268 EALSRGIHVTSVNRSGPPARQEPWLKEVEWVRGDVFDPDVWRMQLRDASGVVSCIGGFGTNDE-MRRINGHANVKAVQAAAEEDVKRFVLISAHYFSVPAIILR-GYYEGKRIAEEAVRSKFPYGGIILRPGFIHGNRNVG---------NLTVPLSVIGGPLEAVMRSRAFTWT--SNLPIVGSVLLPPVKATAVAKAAVR 456
BLAST of mRNA_M-pyrifera_M_contig8706.20244.1 vs. uniprot
Match: A0A388KGE5_CHABU (NAD(P)-bd_dom domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KGE5_CHABU) HSP 1 Score: 132 bits (331), Expect = 9.670e-30 Identity = 86/218 (39.45%), Postives = 118/218 (54.13%), Query Frame = 3 Query: 18 GCTVIALSRKGVPENGG-----------------VWTKSVKWVEANAVNQDLYRAELRQTDTVVSCVGGFGKTDAYMGLINGEANIKLVEAAADAGVKQFVFMSVHDYKAPSFVKRVGYFDGKRRAEKVVGELFGDKGVILKPAFVYGERSVKLTGPNGRERTLNVPLQRLGGPLARLAGTGVAKKIAE-SGLPLADVAWTQPLSVEAVGKSAVRCCL 617 G V++LSR G GG W V W++ + D + L TVVSC+GGFG + M INGEAN++ V AA AGV +F+++SVHDY PSFV+ VGYF GK+RAEK V E F GVIL+P F+YG+R V NG ++V L ++G P +L G+ I LP +D+ P++VE V +AV+ + Sbjct: 253 GIEVVSLSRTGRSPYGGESGGGLDASSSLNPTESTWADQVTWIKGDVFAAD-WSTLLDGVTTVVSCIGGFGNNE-QMEKINGEANVQAVAAARQAGVGRFIYISVHDYNLPSFVRSVGYFSGKQRAEKAVLESFPATGVILRPGFIYGKRKV-----NG----VDVALDQVGQPFEKLL-EGIDNWIKPLKALPASDLLLLPPVNVEDVADAAVKAVI 458
BLAST of mRNA_M-pyrifera_M_contig8706.20244.1 vs. uniprot
Match: A0A7S4LN96_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4LN96_9EUGL) HSP 1 Score: 126 bits (316), Expect = 2.740e-29 Identity = 81/214 (37.85%), Postives = 118/214 (55.14%), Query Frame = 3 Query: 9 VAAGCTVIALSRKG----VPENGGVWTKSVKWVEANAVNQDLYRAEL-RQTDTVVSCVGGFGKTDAYMGLINGEANIKLVEAAADAGVKQFVFMSVHDYK--APSFVKRVGYFDGKRRAEKVVGELFGDKGVILKPAFVYGERSVKLTGPNGRERTLNVPLQRLGGPLARLAGTGVAKKIAESGLPLADVAWTQPLSVEAVGKSAVRCCLGGVE 629 V G V ALSR G + W K V W++ + +++D +RA L T V+S VG FG ++A+M + G+ NI E AA A V +FVF+S HDY+ GYF+GKRR E+ V EL+ G +L+P+FVYG R T+ +PL +G PL L K +A LP+ D+ +T P+SVEAV ++A++ +G +E Sbjct: 60 VERGLQVAALSRGGRLYSPAQADQPWAKEVTWLKGDVMDRDAWRAHLCSDTTAVISSVGAFG-SNAFMEQVCGDTNIAACEEAAAAHVPRFVFVSAHDYRLIGHGVGPLKGYFNGKRRVERRVRELYPSGGHVLQPSFVYGTR---------HHGTMKIPLGLVGAPLEALCALAPVKALAR--LPILDLPFTSPVSVEAVARTAIKGAVGELE 261
BLAST of mRNA_M-pyrifera_M_contig8706.20244.1 vs. uniprot
Match: A0A5J4YUC1_PORPP (NAD(P)-bd_dom domain-containing protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YUC1_PORPP) HSP 1 Score: 124 bits (312), Expect = 2.820e-28 Identity = 79/210 (37.62%), Postives = 119/210 (56.67%), Query Frame = 3 Query: 18 GCTVIALSRKGVP--ENGGVWTKSVKWVEANAVNQDLYRAELRQTDTVVSCVGGFGKTDAYMGLINGEANIKLVEAAADAGVKQFVFMSVHDYK-APSFVKRVGYFDGKRRAEKVVGELFGDKGVILKPAFVYGERSVKLTGPNGRERTLNVPLQRLGGPLARLAGTGVAKKIAESGLPLADVAWTQPLSVEAVGKSAVRCCLGGVENLG 638 G +V+ +SR G + V W+ +A+ + ++ L VVSCVGGFG + M I G+ N+ + AA +AGV +FVF+S Y P+F++ GYF+GK+ AE+V GELFG IL+PAFVYG R + + N +LNVPLQ +G PL T A+ +++ G P ++A++ P SV+ + K AV G ++ G Sbjct: 87 GLSVLCISRSGASSAQLKDASLDGVAWLRGDALEPESWKYALSGASGVVSCVGGFGSNE-QMRRICGDTNVSVARAAHEAGVPRFVFVSARMYAFQPAFMR--GYFEGKKMAEQVAGELFGKDATILRPAFVYGARQISIPKVNV---SLNVPLQLIGKPLHAFNQTQAARAVSKLGGPF-ELAFSPPTSVDDLSKCAVLGATGYLQAQG 289
BLAST of mRNA_M-pyrifera_M_contig8706.20244.1 vs. uniprot
Match: A0A1D1ZIT8_9ARAE (Uncharacterized protein At1g32220, chloroplastic (Fragment) n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1ZIT8_9ARAE) HSP 1 Score: 125 bits (313), Expect = 3.670e-28 Identity = 78/201 (38.81%), Postives = 110/201 (54.73%), Query Frame = 3 Query: 9 VAAGCTVIALSRKGVPENGGVWTKSVKWVEANAVNQDLYRAELRQTDTVVSCVGGFGKTDAYMGLINGEANIKLVEAAADAGVKQFVFMSVHDYKAPSFVKRVGYFDGKRRAEKVVGELFGDKGVILKPAFVYGERSVKLTGPNGRERTLNVPLQRLGGPLARL--AGTGVAKKIAESGLPLADVAWTQPLSVEAVGKSAV 605 V+ G V+++SR G P G W V W+ + L T VVS +GGFG ++ M INGEAN+ V+AA D GV +F+ +SVHDY P+F+ GYF GKR+AE V + + GV+L+PAF+YG R V NG E +PL +G PL R+ A K + LP +D+ P+SV+ V + + Sbjct: 138 VSKGIEVVSVSRSGRPSYTGSWVDQVTWIAGDVFYMSWNEVLLGAT-AVVSTLGGFG-SEEQMKKINGEANVLAVDAAKDFGVPKFILISVHDYNLPTFLLSSGYFTGKRKAESEVLSKYPNSGVVLRPAFIYGNRKV-----NGFE----IPLNLIGEPLERILNATQNFIKPLGS--LPASDLLLAPPVSVDDVAFAVI 325 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8706.20244.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig8706.20244.1 >prot_M-pyrifera_M_contig8706.20244.1 ID=prot_M-pyrifera_M_contig8706.20244.1|Name=mRNA_M-pyrifera_M_contig8706.20244.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=171bp MGLINGEANIKLVEAAADAGVKQFVFMSVHDYKAPSFVKRVGYFDGKRRAback to top mRNA from alignment at M-pyrifera_M_contig8706:5657..9698+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig8706.20244.1 ID=mRNA_M-pyrifera_M_contig8706.20244.1|Name=mRNA_M-pyrifera_M_contig8706.20244.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=4042bp|location=Sequence derived from alignment at M-pyrifera_M_contig8706:5657..9698+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig8706:5657..9698+ >mRNA_M-pyrifera_M_contig8706.20244.1 ID=mRNA_M-pyrifera_M_contig8706.20244.1|Name=mRNA_M-pyrifera_M_contig8706.20244.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1026bp|location=Sequence derived from alignment at M-pyrifera_M_contig8706:5657..9698+ (Macrocystis pyrifera P11B4 male)back to top |