mRNA_M-pyrifera_M_contig87026.20236.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig87026.20236.1
Unique NamemRNA_M-pyrifera_M_contig87026.20236.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig87026.20236.1 vs. uniprot
Match: A0A5A8D329_CAFRO (DNA replication licensing factor MCM6 n=5 Tax=Sar TaxID=2698737 RepID=A0A5A8D329_CAFRO)

HSP 1 Score: 250 bits (638), Expect = 2.490e-74
Identity = 123/209 (58.85%), Postives = 161/209 (77.03%), Query Frame = 1
Query:    7 SGMSEEGESQR-VREYEVQINTMAEMDQSTLFVDFSHLFAFDRYLATTLQEEYYRFEPHVRAGLAEVVQELQPEFAQFEGDSRDFFVAFYNLMDKLRVRELRCAQVGQLVSFSGTVTRTSEVRPELIAGAFRCEDCATLVRNVEQQFKYTTPQVCPNAECGNRTKWQLVVERSRFADWQRVRVQENAEEIPAGSMPRSVDVVLRHAAVE 630
            SG+ E   S R V+EYE+ +++M E DQ+TLFVDFSHL  +D +LA+T+ EEYYRFEP +R  +  VV++   +FA  EG  RDFFVAFYN+  +LRVR+L+  ++G L SF+GTVTRTSEVRPEL++G+F CE+C+T++  VEQQFK+T P  C N  C N++ W+L ++R RF DWQRVRVQENA+EIP GSMPR+VDVVLR  AVE
Sbjct:   43 SGIDERSRSTRLVKEYELAVDSMKEFDQNTLFVDFSHLQQYDSHLASTIVEEYYRFEPFLRTAVFSVVKDRHADFALVEGSPRDFFVAFYNMQAQLRVRDLKTREIGCLTSFNGTVTRTSEVRPELLSGSFECEECSTVLDGVEQQFKFTYPVRCSNQHCPNKSGWKLRLDRCRFVDWQRVRVQENADEIPPGSMPRTVDVVLRGGAVE 251          
BLAST of mRNA_M-pyrifera_M_contig87026.20236.1 vs. uniprot
Match: A0A7S0CZR7_MICPS (DNA replication licensing factor MCM6 (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0CZR7_MICPS)

HSP 1 Score: 212 bits (540), Expect = 9.360e-65
Identity = 104/198 (52.53%), Postives = 143/198 (72.22%), Query Frame = 1
Query:   43 REYEVQINTMAEMDQSTLFVDFSHLFAFDRYLA-TTLQEEYYRFEPHVRAGLAEVVQELQPEFAQFEGDS-RDFFVAFYNLMDKLRVRELRCAQVGQLVSFSGTVTRTSEVRPELIAGAFRCEDCATLVRNVEQQFKYTTPQVCPNAECGNRTKWQLVVERSRFADWQRVRVQENAEEIPAGSMPRSVDVVLRHAAVE 630
            R+Y  Q+  M E   +TL+V+F HL  FD  LA   ++  +Y+++P +R  + E V++ +P   +++G   ++F+VAF NL    R+REL+   +GQL SFSGTVTRTSEVRPEL+ GAF+C +C TLV +VEQQ +YTTP +C NA+CGNR KW L  +  +F DWQRVRVQENA E+PAGS+PRS++V+LRH AVE
Sbjct:   74 RDYVEQLELMYERSGTTLYVNFQHLMEFDGVLAHEAVEANFYKYQPFLRRAVVEFVRQHKPAMVRWDGGKEKEFWVAFVNLPRVHRLRELKAENIGQLTSFSGTVTRTSEVRPELLLGAFKCAECDTLVPDVEQQCRYTTPAICLNAQCGNRMKWTLAQDGCKFVDWQRVRVQENANEVPAGSLPRSMEVILRHEAVE 271          
BLAST of mRNA_M-pyrifera_M_contig87026.20236.1 vs. uniprot
Match: A0A2G9H878_9LAMI (DNA replication licensing factor MCM6 n=1 Tax=Handroanthus impetiginosus TaxID=429701 RepID=A0A2G9H878_9LAMI)

HSP 1 Score: 215 bits (548), Expect = 1.030e-64
Identity = 103/210 (49.05%), Postives = 144/210 (68.57%), Query Frame = 1
Query:    1 RTSGMSEEGESQRVREYEVQINTMAEMDQSTLFVDFSHLFAFDRYLATTLQEEYYRFEPHVRAGLAEVVQELQPEFAQFEGDSRDFFVAFYNLMDKLRVRELRCAQVGQLVSFSGTVTRTSEVRPELIAGAFRCEDCATLVRNVEQQFKYTTPQVCPNAECGNRTKWQLVVERSRFADWQRVRVQENAEEIPAGSMPRSVDVVLRHAAVE 630
            +T  ++EEG       YE ++  M   + +T+F+DFSH+  F+  L   + +E+ RFEP++R      + EL+P F   +  ++D  VAFYNL    R+REL  A++G+LVS  G VTRTSEVRPEL+ G F+C +C  +++NVEQQFKYT P +C NA C NRTKW L+ + S+F DWQRVR+QE ++EIPAGS+PRS+DV+LRH  VE
Sbjct:   27 KTFRLAEEGRGAYDPYYEAEVEAMRPNESNTMFIDFSHVMRFNDVLQKAISDEFLRFEPYLRNACKRFIMELKPTFIADDNPNKDINVAFYNLPLVKRLRELTTAEIGKLVSVGGVVTRTSEVRPELLQGTFKCLECGNIIKNVEQQFKYTEPIICMNATCQNRTKWALLRQESKFTDWQRVRMQETSKEIPAGSLPRSLDVILRHDIVE 236          
BLAST of mRNA_M-pyrifera_M_contig87026.20236.1 vs. uniprot
Match: A0A7C9AW07_OPUST (DNA replication licensing factor MCM6 (Fragment) n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9AW07_OPUST)

HSP 1 Score: 208 bits (529), Expect = 2.180e-64
Identity = 97/194 (50.00%), Postives = 137/194 (70.62%), Query Frame = 1
Query:   49 YEVQINTMAEMDQSTLFVDFSHLFAFDRYLATTLQEEYYRFEPHVRAGLAEVVQELQPEFAQFEGDSRDFFVAFYNLMDKLRVRELRCAQVGQLVSFSGTVTRTSEVRPELIAGAFRCEDCATLVRNVEQQFKYTTPQVCPNAECGNRTKWQLVVERSRFADWQRVRVQENAEEIPAGSMPRSVDVVLRHAAVE 630
            YE +I  M   + +T+F+DFSH+  F+  L   + +EY RFEP+++      V E +P+F   +  ++D  V+F+N+    R+REL  ++VG+LVS +G VTRTSEVRPEL+ G F+C DC  +++NVEQQFKYT P +C NA C NR  W L+ + S+FADWQRVR+QE ++EIPAGS+PRS+DV+LRH  VE
Sbjct:   38 YESEIAAMEANESTTMFIDFSHVMRFNDILQRAISDEYLRFEPYLKNACKRFVMEQKPKFIADDNPNKDINVSFFNIPLVKRLRELTTSEVGRLVSVTGVVTRTSEVRPELLQGTFKCLDCGNVIKNVEQQFKYTEPTICVNAACSNRRNWALLRQESKFADWQRVRMQETSKEIPAGSLPRSLDVILRHEIVE 231          
BLAST of mRNA_M-pyrifera_M_contig87026.20236.1 vs. uniprot
Match: B9T7E5_RICCO (DNA replication licensing factor MCM6 n=8 Tax=Euphorbiaceae TaxID=3977 RepID=B9T7E5_RICCO)

HSP 1 Score: 219 bits (558), Expect = 6.340e-64
Identity = 103/194 (53.09%), Postives = 138/194 (71.13%), Query Frame = 1
Query:   49 YEVQINTMAEMDQSTLFVDFSHLFAFDRYLATTLQEEYYRFEPHVRAGLAEVVQELQPEFAQFEGDSRDFFVAFYNLMDKLRVRELRCAQVGQLVSFSGTVTRTSEVRPELIAGAFRCEDCATLVRNVEQQFKYTTPQVCPNAECGNRTKWQLVVERSRFADWQRVRVQENAEEIPAGSMPRSVDVVLRHAAVE 630
            YE QI TM   + +T+F+DFSH+  F+  L   + +EY RFEP+++      V E+ P F   +  ++D  VAFYN+    R+REL  A++G+LVS +G VTRTSEVRPEL+ G FRC DC  +++NVEQQFKYT P +C NA C NR KW L+ + S+FADWQRVR+QE ++EIPAGS+PRS+DV+LRH  VE
Sbjct:   40 YEAQIETMKVNESTTMFIDFSHVMRFNDLLQKAIADEYLRFEPYLKNACKRFVMEMNPTFISDDNPNKDINVAFYNIPFSKRLRELTTAEIGKLVSVTGVVTRTSEVRPELLQGTFRCLDCGGVIKNVEQQFKYTEPTICVNATCNNRMKWALLRQESKFADWQRVRMQETSKEIPAGSLPRSLDVILRHDIVE 233          
BLAST of mRNA_M-pyrifera_M_contig87026.20236.1 vs. uniprot
Match: A0A540NG59_MALBA (DNA replication licensing factor MCM6 n=1 Tax=Malus baccata TaxID=106549 RepID=A0A540NG59_MALBA)

HSP 1 Score: 210 bits (534), Expect = 1.760e-63
Identity = 98/194 (50.52%), Postives = 138/194 (71.13%), Query Frame = 1
Query:   49 YEVQINTMAEMDQSTLFVDFSHLFAFDRYLATTLQEEYYRFEPHVRAGLAEVVQELQPEFAQFEGDSRDFFVAFYNLMDKLRVRELRCAQVGQLVSFSGTVTRTSEVRPELIAGAFRCEDCATLVRNVEQQFKYTTPQVCPNAECGNRTKWQLVVERSRFADWQRVRVQENAEEIPAGSMPRSVDVVLRHAAVE 630
            YE +I  MA  + ST+F+DFSH+  F+  L   + +E+ RFEP+++      V +L+P F   +  ++D  VAF+NL    R+REL  A++G+LVS  G VTRTSEVRPEL+ G F+C +C  +++NVEQQFKYT P +C NA C NR +W L+ + S+FADWQRVR+QE ++EIPAGS+PRS+DV++RH  VE
Sbjct:   38 YEAEIEAMAANESSTMFIDFSHVMVFNNLLQKAISDEFLRFEPYLKNACKTFVTQLRPNFIS-DDTNKDINVAFFNLPVSKRLRELTTAEIGKLVSVKGVVTRTSEVRPELLHGTFKCLECGGVIKNVEQQFKYTEPTICVNATCSNRARWALLRQESKFADWQRVRMQETSKEIPAGSLPRSLDVIIRHEIVE 230          
BLAST of mRNA_M-pyrifera_M_contig87026.20236.1 vs. uniprot
Match: A0A6I9TPA9_SESIN (DNA replication licensing factor MCM6 n=2 Tax=Lamiales TaxID=4143 RepID=A0A6I9TPA9_SESIN)

HSP 1 Score: 219 bits (557), Expect = 4.440e-63
Identity = 105/210 (50.00%), Postives = 146/210 (69.52%), Query Frame = 1
Query:    1 RTSGMSEEGESQRVREYEVQINTMAEMDQSTLFVDFSHLFAFDRYLATTLQEEYYRFEPHVRAGLAEVVQELQPEFAQFEGDSRDFFVAFYNLMDKLRVRELRCAQVGQLVSFSGTVTRTSEVRPELIAGAFRCEDCATLVRNVEQQFKYTTPQVCPNAECGNRTKWQLVVERSRFADWQRVRVQENAEEIPAGSMPRSVDVVLRHAAVE 630
            +T  ++EEG       YE ++++M   + +T+F+DFSH+  F+  L   + +E+ RFEP++R      + EL+P F   +  ++D  VAFYNL    R+REL   ++G+LVS SG VTRTSEVRPEL+ G F+C DC  +++NVEQQFKYT P +C NA C NRTKW L+ + S+F+DWQRVR+QE A EIPAGS+PRS+DV+LRH  VE
Sbjct:   27 KTFRVAEEGRGSYESYYEAEVDSMRPNESNTMFIDFSHVMRFNDVLQKAISDEFLRFEPYLRNACKRFIMELKPTFIADDNPNKDINVAFYNLPLIKRLRELTTTEIGKLVSVSGVVTRTSEVRPELLQGTFKCLDCGNVIKNVEQQFKYTEPIICMNATCQNRTKWALLRQESKFSDWQRVRMQETAREIPAGSLPRSLDVILRHDIVE 236          
BLAST of mRNA_M-pyrifera_M_contig87026.20236.1 vs. uniprot
Match: A0A1S3U859_VIGRR (DNA replication licensing factor MCM6 n=10 Tax=Phaseoleae TaxID=163735 RepID=A0A1S3U859_VIGRR)

HSP 1 Score: 217 bits (553), Expect = 1.800e-62
Identity = 100/195 (51.28%), Postives = 140/195 (71.79%), Query Frame = 1
Query:   46 EYEVQINTMAEMDQSTLFVDFSHLFAFDRYLATTLQEEYYRFEPHVRAGLAEVVQELQPEFAQFEGDSRDFFVAFYNLMDKLRVRELRCAQVGQLVSFSGTVTRTSEVRPELIAGAFRCEDCATLVRNVEQQFKYTTPQVCPNAECGNRTKWQLVVERSRFADWQRVRVQENAEEIPAGSMPRSVDVVLRHAAVE 630
            +YE +I  M   + +T+F+DFSH+  F   L  T+ +EY R+EP+++      V EL+P     +G ++D  VAFYN+    R+REL  +++G+LVS +G VTRTSEVRPEL+ G F+C DC  +++NVEQQFKYT P +C NA C NRT+W L+ + S+FADWQRVR+QE ++EIPAGS+PRS+DV+LRH  VE
Sbjct:   36 QYEAEIEVMRVNESNTMFIDFSHVVRFSDLLQQTISDEYLRYEPYLKNACKRFVMELKPSVVSDDGPNKDINVAFYNIAVIKRLRELGTSEIGRLVSVTGVVTRTSEVRPELLQGTFKCLDCGAVIKNVEQQFKYTEPTICTNATCNNRTRWVLLRQESKFADWQRVRMQETSKEIPAGSLPRSLDVILRHEIVE 230          
BLAST of mRNA_M-pyrifera_M_contig87026.20236.1 vs. uniprot
Match: A0A2Z7ATV1_9LAMI (DNA replication licensing factor MCM6 n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7ATV1_9LAMI)

HSP 1 Score: 217 bits (552), Expect = 2.420e-62
Identity = 101/194 (52.06%), Postives = 138/194 (71.13%), Query Frame = 1
Query:   49 YEVQINTMAEMDQSTLFVDFSHLFAFDRYLATTLQEEYYRFEPHVRAGLAEVVQELQPEFAQFEGDSRDFFVAFYNLMDKLRVRELRCAQVGQLVSFSGTVTRTSEVRPELIAGAFRCEDCATLVRNVEQQFKYTTPQVCPNAECGNRTKWQLVVERSRFADWQRVRVQENAEEIPAGSMPRSVDVVLRHAAVE 630
            YE ++  M   + +T+F+DFSH+  F+  +   + +E+ RFEP++       V EL+P F   +  ++D  VAFYNL    R+REL  A++G+LVS SG VTRTSEVRPEL+ G F+C DC  +V+NVEQQFKYT P +C NA C NR+KW L+ + S+FADWQRVR+QE ++EIPAGS+PRS+DV+LRH  VE
Sbjct:   47 YEAEVEAMRPNESNTMFIDFSHVMTFNNIIQKAISDEFLRFEPYLNNACKRFVMELKPSFIADDNQNKDINVAFYNLPMVKRLRELTTAEIGKLVSVSGVVTRTSEVRPELLQGTFKCLDCGNVVKNVEQQFKYTEPIICMNATCHNRSKWALLRQESKFADWQRVRMQETSQEIPAGSLPRSLDVILRHDIVE 240          
BLAST of mRNA_M-pyrifera_M_contig87026.20236.1 vs. uniprot
Match: A0A444ZGG5_ARAHY (DNA replication licensing factor MCM6 n=1 Tax=Arachis hypogaea TaxID=3818 RepID=A0A444ZGG5_ARAHY)

HSP 1 Score: 206 bits (525), Expect = 2.420e-62
Identity = 95/194 (48.97%), Postives = 134/194 (69.07%), Query Frame = 1
Query:   49 YEVQINTMAEMDQSTLFVDFSHLFAFDRYLATTLQEEYYRFEPHVRAGLAEVVQELQPEFAQFEGDSRDFFVAFYNLMDKLRVRELRCAQVGQLVSFSGTVTRTSEVRPELIAGAFRCEDCATLVRNVEQQFKYTTPQVCPNAECGNRTKWQLVVERSRFADWQRVRVQENAEEIPAGSMPRSVDVVLRHAAVE 630
            YE +I  M   + +T+F+DF H+  F   L   + +EY RFEP+++      V EL+P F   +  ++D  +AFYNL    R+REL  +++G+LVS +G VTRTSEVRPELI G F+C +C  +++NVEQ+FKYT P +CP   C  R +W L+ + S+FADWQRVR+QE ++EIPAGS+PRS+DV+LRH  VE
Sbjct:   37 YEAEIEVMRANESNTMFIDFEHVITFSDLLQKAISDEYLRFEPYLKNACKRFVTELKPTFISDDNPNKDINIAFYNLPIVKRLRELATSEIGRLVSVTGVVTRTSEVRPELIQGTFKCLECGGVIKNVEQEFKYTEPTICPIPTCNKRARWLLMRQESKFADWQRVRMQETSKEIPAGSLPRSLDVILRHEIVE 230          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig87026.20236.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A8D329_CAFRO2.490e-7458.85DNA replication licensing factor MCM6 n=5 Tax=Sar ... [more]
A0A7S0CZR7_MICPS9.360e-6552.53DNA replication licensing factor MCM6 (Fragment) n... [more]
A0A2G9H878_9LAMI1.030e-6449.05DNA replication licensing factor MCM6 n=1 Tax=Hand... [more]
A0A7C9AW07_OPUST2.180e-6450.00DNA replication licensing factor MCM6 (Fragment) n... [more]
B9T7E5_RICCO6.340e-6453.09DNA replication licensing factor MCM6 n=8 Tax=Euph... [more]
A0A540NG59_MALBA1.760e-6350.52DNA replication licensing factor MCM6 n=1 Tax=Malu... [more]
A0A6I9TPA9_SESIN4.440e-6350.00DNA replication licensing factor MCM6 n=2 Tax=Lami... [more]
A0A1S3U859_VIGRR1.800e-6251.28DNA replication licensing factor MCM6 n=10 Tax=Pha... [more]
A0A2Z7ATV1_9LAMI2.420e-6252.06DNA replication licensing factor MCM6 n=1 Tax=Dorc... [more]
A0A444ZGG5_ARAHY2.420e-6248.97DNA replication licensing factor MCM6 n=1 Tax=Arac... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig87026contigM-pyrifera_M_contig87026:1..630 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score221.5
Seed ortholog evalue3.7e-55
Seed eggNOG ortholog3988.XP_002534164.1
Preferred nameMCM6
KEGG koko:K02542
KEGG Pathwayko03030,ko04110,ko04111,ko04113,map03030,map04110,map04111,map04113
KEGG ModuleM00285
Hectar predicted targeting categoryother localisation
GOsGO:0000347,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006268,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016043,GO:0032392,GO:0032508,GO:0032991,GO:0034641,GO:0034645,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0051276,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:1901360,GO:1901576
EggNOG free text desc.Belongs to the MCM family
EggNOG OGs37SEV@33090,3GGZJ@35493,4JHTF@91835,COG1241@1,KOG0480@2759
Ec32 ortholog descriptionNucleic acid-binding, OB-fold
Ec32 orthologEc-06_003780.1
EC3.6.4.12
COG Functional cat.L
Best tax levelfabids
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03032
Exons1
Model size630
Cds size618
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816779.683932-CDS-M-pyrifera_M_contig87026:0..6181622816779.683932-CDS-M-pyrifera_M_contig87026:0..618Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig87026 1..618 -
1692278173.9305267-CDS-M-pyrifera_M_contig87026:0..6181692278173.9305267-CDS-M-pyrifera_M_contig87026:0..618Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig87026 1..618 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816779.6950905-UTR-M-pyrifera_M_contig87026:618..6301622816779.6950905-UTR-M-pyrifera_M_contig87026:618..630Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig87026 619..630 -
1692278173.9448726-UTR-M-pyrifera_M_contig87026:618..6301692278173.9448726-UTR-M-pyrifera_M_contig87026:618..630Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig87026 619..630 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig87026.20236.1prot_M-pyrifera_M_contig87026.20236.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig87026 1..618 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig87026.20236.1

>prot_M-pyrifera_M_contig87026.20236.1 ID=prot_M-pyrifera_M_contig87026.20236.1|Name=mRNA_M-pyrifera_M_contig87026.20236.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=206bp
MSEEGESQRVREYEVQINTMAEMDQSTLFVDFSHLFAFDRYLATTLQEEY
YRFEPHVRAGLAEVVQELQPEFAQFEGDSRDFFVAFYNLMDKLRVRELRC
AQVGQLVSFSGTVTRTSEVRPELIAGAFRCEDCATLVRNVEQQFKYTTPQ
VCPNAECGNRTKWQLVVERSRFADWQRVRVQENAEEIPAGSMPRSVDVVL
RHAAVE
back to top

mRNA from alignment at M-pyrifera_M_contig87026:1..630-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig87026.20236.1 ID=mRNA_M-pyrifera_M_contig87026.20236.1|Name=mRNA_M-pyrifera_M_contig87026.20236.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=630bp|location=Sequence derived from alignment at M-pyrifera_M_contig87026:1..630- (Macrocystis pyrifera P11B4 male)
CGCACGAGTGGGATGTCGGAGGAGGGTGAGTCGCAGCGGGTGCGGGAGTA CGAGGTGCAGATCAACACGATGGCGGAGATGGATCAGTCGACCTTGTTCG TGGACTTTTCGCACTTGTTCGCGTTCGACCGGTACCTTGCGACGACGCTG CAGGAAGAATACTACCGATTTGAGCCGCACGTGCGCGCAGGGCTCGCGGA GGTGGTGCAGGAGCTGCAGCCCGAGTTTGCGCAGTTCGAGGGGGATTCCA GGGACTTTTTCGTGGCCTTCTACAACCTGATGGACAAGCTGCGGGTGCGC GAGCTGCGTTGCGCGCAGGTGGGGCAGCTGGTGAGCTTCAGCGGGACCGT GACACGCACTTCTGAAGTGCGGCCCGAATTGATCGCCGGAGCGTTTCGCT GCGAGGACTGTGCGACGCTGGTGCGCAACGTGGAGCAGCAGTTCAAGTAC ACGACGCCGCAGGTGTGTCCCAACGCTGAGTGCGGGAACCGCACGAAATG GCAGCTGGTCGTGGAGCGCTCTCGTTTCGCCGACTGGCAGCGGGTGCGGG TGCAGGAGAACGCGGAGGAGATTCCCGCGGGCTCCATGCCTCGGTCGGTG GACGTGGTGTTGCGACATGCCGCGGTGGAG
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig87026:1..630-

>mRNA_M-pyrifera_M_contig87026.20236.1 ID=mRNA_M-pyrifera_M_contig87026.20236.1|Name=mRNA_M-pyrifera_M_contig87026.20236.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1236bp|location=Sequence derived from alignment at M-pyrifera_M_contig87026:1..630- (Macrocystis pyrifera P11B4 male)
ATGTCGGAGGAGGGTGAGTCGCAGCGGGTGCGGGAGTACGAGGTGCAGAT
CAACACGATGGCGGAGATGGATCAGTCGACCTTGTTCGTGGACTTTTCGC
ACTTGTTCGCGTTCGACCGGTACCTTGCGACGACGCTGCAGGAAGAATAC
TACCGATTTGAGCCGCACGTGCGCGCAGGGCTCGCGGAGGTGGTGCAGGA
GCTGCAGCCCGAGTTTGCGCAGTTCGAGGGGGATTCCAGGGACTTTTTCG
TGGCCTTCTACAACCTGATGGACAAGCTGCGGGTGCGCGAGCTGCGTTGC
GCGCAGGTGGGGCAGCTGGTGAGCTTCAGCGGGACCGTGACACGCACTTC
TGAAGTGCGGCCCGAATTGATCGCCGGAGCGTTTCGCTGCGAGGACTGTG
CGACGCTGGTGCGCAACGTGGAGCAGCAGTTCAAGTACACGACGCCGCAG
GTGTGTCCCAACGCTGAGTGCGGGAACCGCACGAAATGGCAGCTGGTCGT
GGAGCGCTCTCGTTTCGCCGACTGGCAGCGGGTGCGGGTGCAGGAGAACG
CGGAGGAGATTCCCGCGGGCTCCATGCCTCGGTCGGTGGACGTGGTGTTG
CGACATGCCGCGGTGGAGATGTCGGAGGAGGGTGAGTCGCAGCGGGTGCG
GGAGTACGAGGTGCAGATCAACACGATGGCGGAGATGGATCAGTCGACCT
TGTTCGTGGACTTTTCGCACTTGTTCGCGTTCGACCGGTACCTTGCGACG
ACGCTGCAGGAAGAATACTACCGATTTGAGCCGCACGTGCGCGCAGGGCT
CGCGGAGGTGGTGCAGGAGCTGCAGCCCGAGTTTGCGCAGTTCGAGGGGG
ATTCCAGGGACTTTTTCGTGGCCTTCTACAACCTGATGGACAAGCTGCGG
GTGCGCGAGCTGCGTTGCGCGCAGGTGGGGCAGCTGGTGAGCTTCAGCGG
GACCGTGACACGCACTTCTGAAGTGCGGCCCGAATTGATCGCCGGAGCGT
TTCGCTGCGAGGACTGTGCGACGCTGGTGCGCAACGTGGAGCAGCAGTTC
AAGTACACGACGCCGCAGGTGTGTCCCAACGCTGAGTGCGGGAACCGCAC
GAAATGGCAGCTGGTCGTGGAGCGCTCTCGTTTCGCCGACTGGCAGCGGG
TGCGGGTGCAGGAGAACGCGGAGGAGATTCCCGCGGGCTCCATGCCTCGG
TCGGTGGACGTGGTGTTGCGACATGCCGCGGTGGAG
back to top