prot_M-pyrifera_M_contig109623.2016.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig109623.2016.1
Unique Name	prot_M-pyrifera_M_contig109623.2016.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	200

Homology

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BLAST of mRNA_M-pyrifera_M_contig109623.2016.1 vs. uniprot
Match: A0A8J6CFR3_DIALT (MFS domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CFR3_DIALT)

HSP 1 Score: 81.3 bits (199), Expect = 1.760e-14
Identity = 59/191 (30.89%), Postives = 96/191 (50.26%), Query Frame = 0

Query:    3 PFNFVRLFTKSPRLAKLNLLVALQALPANMGDVAQMFAKTKRGWGPQEVGKFQAALGLAAIMSGGLTGKLIQQFGKREYSTLSNLAAIVSYYVFGIADTSAKAYLGCGLSAFAQMRSAALGAMILRTGAAEGSGFGKMAADRANLTAVVKVVGPLLSSSLYSTGAKRGNEGLPYFFMVGLLVICQGLMFSI 193
            P    RLF  S RLA L+ L+ALQ LP    DV Q+ A      G  E  +    +G +++ + GL   LI++ G R+++ L+ ++  +  Y  G++ +   A L    +     RS  +  ++   G   G   G++A DRANL A+VKVVGP++ + LY+ G   G   LP+     L++    L + +
Sbjct:  246 PIACTRLFGASRRLALLSALLALQVLPFFTTDVLQVHALEAWRMGNAERTRLFTFVGASSVGANGLASALIRRLGLRDFTALAGVSHAL--YWAGVSHSGGAALLLALPTMLGGARSLGVSTLVTAEGTRAGLRQGQLAGDRANLFALVKVVGPIVYAQLYARGKAIGLPQLPFVLNAVLMLAAAMLSYRL 434

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig109623.2016.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig109623.2016.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A8J6CFR3_DIALT	1.760e-14	30.89	MFS domain-containing protein n=1 Tax=Diacronema l...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.1250.20		coord: 16..197 e-value: 2.7E-9 score: 38.7
None	No IPR available	PANTHER	PTHR23507	FAMILY NOT NAMED	coord: 5..196
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..20
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 70..80
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 147..164
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 176..193
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 81..99
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 165..175
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 52..69
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 100..104
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 128..146
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 21..40
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 41..51
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 105..127
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 194..199
IPR036259	MFS transporter superfamily	SUPERFAMILY	103473	MFS general substrate transporter	coord: 3..193

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig109623	contig	M-pyrifera_M_contig109623:2..601 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig109623.2016.1	mRNA_M-pyrifera_M_contig109623.2016.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig109623 2..601 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig109623.2016.1 ID=prot_M-pyrifera_M_contig109623.2016.1|Name=mRNA_M-pyrifera_M_contig109623.2016.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=200bp
VNPFNFVRLFTKSPRLAKLNLLVALQALPANMGDVAQMFAKTKRGWGPQE
VGKFQAALGLAAIMSGGLTGKLIQQFGKREYSTLSNLAAIVSYYVFGIAD
TSAKAYLGCGLSAFAQMRSAALGAMILRTGAAEGSGFGKMAADRANLTAV
VKVVGPLLSSSLYSTGAKRGNEGLPYFFMVGLLVICQGLMFSIPQKEWV*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036259	MFS_trans_sf