mRNA_M-pyrifera_M_contig86638.20154.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig86638.20154.1 vs. uniprot
Match: UPI001458FD1C (structural maintenance of chromosomes protein 5-like n=2 Tax=Pecten maximus TaxID=6579 RepID=UPI001458FD1C) HSP 1 Score: 130 bits (328), Expect = 2.330e-31 Identity = 82/221 (37.10%), Postives = 121/221 (54.75%), Query Frame = 1 Query: 1 EALQQRIRSFKTQASEAFQGDDLDAEEIAQRYANAEKSATIHEAELENLRQ---GQNQNEVRLKEERAAWKERLTTKLVAISEHMSRTFSKISVRSNVVLDEGDTGDDLSKFGIVIQVAFRASAPLQRLRATAQSGGERAITTMMYLIAMQHLTQCPFRCVDEMNQGMDSVYERFVFREIMDMCGKEPELDERGIEKTGKQYIVATPKLLPNLRYDDHCRV 654 E + I K +A+ FQ D E I + Y +K T EAELE R+ G ++ VR K++ W E L + I+ + S FS ++ + L + D +D K+G+ I+V FR + L+ L QSGGER++ T++Y++A+Q L +CPFRCVDE+NQGMD + ER VF ++ K K+ QY + TPKLLP+L Y D+ V Sbjct: 849 EGIDSMIHEEKARAASLFQAD----ESIIKEYEVRKKEITSLEAELEKRRRVMAGHHEEVVRAKQQ---WLEPLKALIEKINNNFSYFFSCMNCAGEIELSQPDNPEDYEKYGVKIKVKFRDNEVLRELTPHHQSGGERSVATVLYMMALQELAKCPFRCVDEINQGMDPINERKVFELVVQTVCK----------KSSSQYFLLTPKLLPDLLYADNMTV 1052
BLAST of mRNA_M-pyrifera_M_contig86638.20154.1 vs. uniprot
Match: M4SMW3_9BILA (Structural maintenance of chromosomes protein 5 (Fragment) n=1 Tax=Brachionus manjavacas TaxID=667381 RepID=M4SMW3_9BILA) HSP 1 Score: 124 bits (312), Expect = 2.080e-30 Identity = 75/218 (34.40%), Postives = 120/218 (55.05%), Query Frame = 1 Query: 1 EALQQRIRSFKTQASEAFQGDDLDAEEIAQRYANAEKSATIHEAELENLRQGQNQNEVRLKEERAAWKERLTTKLVAISEHMSRTFSKISVRSNVVLDEGDTGDDLSKFGIVIQVAFRASAPLQRLRATAQSGGERAITTMMYLIAMQHLTQCPFRCVDEMNQGMDSVYERFVFREIMDMCGKEPELDERGIEKTGKQYIVATPKLLPNLRYDDHCRV 654 EAL I + A A+ D+D E++ Q + N +K + + +LE + + ++ + + +W +R+ + I+ + F ++ + L D ++ SK+GI I+V+FR LQ L A QSGGE++++TM+Y+IA+Q +T+CPFR VDE+NQGMD V ER VF I+ + K QY + TPKLLP+L +DD V Sbjct: 143 EALNSEINQCQIIAQCAY---DVD-EKVIQEFENRKKLISQLQKDLEKKNKKLSDHQSNYENMKDSWLQRVDEMINGINVKFTALFMQLKCAGEISLSRPDNSEEFSKYGICIKVSFRTGEKLQELTAWQQSGGEKSVSTMLYMIALQEMTRCPFRVVDEINQGMDPVNERKVFDIIV----------QNSCSKHQAQYFLLTPKLLPDLAFDDKTNV 346
BLAST of mRNA_M-pyrifera_M_contig86638.20154.1 vs. uniprot
Match: A0A812D6P8_SEPPH (Structural maintenance of chromosomes protein 5 n=1 Tax=Sepia pharaonis TaxID=158019 RepID=A0A812D6P8_SEPPH) HSP 1 Score: 122 bits (305), Expect = 4.290e-30 Identity = 70/189 (37.04%), Postives = 104/189 (55.03%), Query Frame = 1 Query: 76 EEIAQRYANAEKSATIHEAELENLRQGQNQNEVRLKEERAAWKERLTTKLVAISEHMSRTFSKISVRSNVVLDEGDTGDDLSKFGIVIQVAFRASAPLQRLRATAQSGGERAITTMMYLIAMQHLTQCPFRCVDEMNQGMDSVYERFVFREIMDMCGKEPELDERGIEKTGKQYIVATPKLLPNLRYDD 642 E++ Q Y +K+ E E+++ + ++ +++ + W E LT + IS S F + V L D +D K+G+ I+V FR S +Q L QSGGER+I+T++YL+A+Q L PFRCVDE+NQGMD + ER VF+ ++D K K QY + TPKLLP+L Y D Sbjct: 81 EKVVQEYYQRQKTIQNLEEEMKSKKVDVENHQQQIEIAKKQWLEPLTKLIAKISRSFSEYFHSMDCAGEVDLKLPDNAEDFEKYGVSIKVKFRDSEQMQELSQNIQSGGERSISTVLYLMAIQDLATAPFRCVDEINQGMDPINERRVFKIVVDAVCK----------KRTSQYFLLTPKLLPDLDYHD 259
BLAST of mRNA_M-pyrifera_M_contig86638.20154.1 vs. uniprot
Match: A0A553PLH1_TIGCA (Structural maintenance of chromosomes protein 5 n=1 Tax=Tigriopus californicus TaxID=6832 RepID=A0A553PLH1_TIGCA) HSP 1 Score: 126 bits (317), Expect = 6.880e-30 Identity = 75/192 (39.06%), Postives = 105/192 (54.69%), Query Frame = 1 Query: 79 EIAQRYANAEKSATIHEAELENLRQGQNQNEVRLKEERAAWKERLTTKLVAISEHMSRTFSKISVRSNVVLDEGDTGDDLSKFGIVIQVAFRASAPLQRLRATAQSGGERAITTMMYLIAMQHLTQCPFRCVDEMNQGMDSVYERFVFREIMDMCGKEPELDERGIEKTGKQYIVATPKLLPNLRYDDHCRV 654 E+ Q Y ++S EAE+ N ++ + + E RA W L + ISE + F + V L +G +D FGI I V +R++ PLQRL QSGGER++ T +Y++A+Q LT PFRCVDE+NQGMD++ ER VF I+ +E QY + TPKLLP+L YDD+ V Sbjct: 844 EVIQTYRKIKQSVADLEAEIANYQRLVQGKQDDMTETRARWLGELLAMINRISERFAAYFEAMGFAGAVELSQGTHENDYQNFGIEIMVKYRSNQPLQRLDPHQQSGGERSVATALYMLALQELTVVPFRCVDEINQGMDALNERRVFDLIVQTSCREQ----------SAQYFLLTPKLLPDLNYDDNMSV 1025
BLAST of mRNA_M-pyrifera_M_contig86638.20154.1 vs. uniprot
Match: A0A5P1FL60_ASPOF (Structural maintenance of chromosomes protein 5 n=2 Tax=Asparagus officinalis TaxID=4686 RepID=A0A5P1FL60_ASPOF) HSP 1 Score: 125 bits (314), Expect = 1.700e-29 Identity = 73/191 (38.22%), Postives = 111/191 (58.12%), Query Frame = 1 Query: 82 IAQRYANAEKSATIHEAELENLRQGQNQNEVRLKEERAAWKERLTTKLVAISEHMSRTFSKISVRSNVVLDEGDTGDDLSKFGIVIQVAFRASAPLQRLRATAQSGGERAITTMMYLIAMQHLTQCPFRCVDEMNQGMDSVYERFVFREIMDMCGKEPELDERGIEKTGKQYIVATPKLLPNLRYDDHCRV 654 I Q Y + ++ E ++E +Q ++ + + W L +V I+E SR F +++V V+LDE +T D K+GI+I+V FR S LQ L A QSGGER+++T++YL+++Q LT CPFR VDE+NQGMD V ER +F++++ +E Q + TPKLLP+L Y D C + Sbjct: 738 ILQEYESRQRKIESMETKVEADQQELDRCLSEINTLKCLWLPTLRNLVVRINETFSRNFQEMAVAGEVLLDEHET--DFDKYGILIKVKFRESGQLQVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPVNERKMFQQLVRAASQE----------NTPQCFLLTPKLLPDLEYSDACSI 916
BLAST of mRNA_M-pyrifera_M_contig86638.20154.1 vs. uniprot
Match: UPI001E67139A (structural maintenance of chromosomes protein 5-like isoform X1 n=2 Tax=Procambarus clarkii TaxID=6728 RepID=UPI001E67139A) HSP 1 Score: 125 bits (314), Expect = 1.730e-29 Identity = 69/194 (35.57%), Postives = 106/194 (54.64%), Query Frame = 1 Query: 64 DLDAEEIAQRYANAEKSATIHEAELENLRQGQNQNEVRLKEERAAWKERLTTKLVAISEHMSRTFSKISVRSNVVLDEGDTGDDLSKFGIVIQVAFRASAPLQRLRATAQSGGERAITTMMYLIAMQHLTQCPFRCVDEMNQGMDSVYERFVFREIMDMCGKEPELDERGIEKTGKQYIVATPKLLPNLRYDDH 645 +++ ++ ++ A+ +A H+ ELEN++ W R+ IS S +++ V+LD+G+ DD SK+GIVI+V FR S L+ L A QSGGERA++T +YL+A+Q L PFRCVDE+NQGMD + ER + +M+ E QY +PKL+PN+ Y++H Sbjct: 840 EVEVRQLRRKLDEAQLTAENHQEELENIK--------------TRWLPRVNEITEKISASFSSFMARMGCAGEVLLDKGEKDDDFSKYGIVIKVRFRDSDRLRELTAHHQSGGERAVSTALYLLALQSLAVVPFRCVDEINQGMDPINERQMLNMLMETAASED----------SSQYFFVSPKLIPNMTYNEH 1009
BLAST of mRNA_M-pyrifera_M_contig86638.20154.1 vs. uniprot
Match: A0A437AZU0_CHISP (Structural maintenance of chromosomes protein 5 n=1 Tax=Chilo suppressalis TaxID=168631 RepID=A0A437AZU0_CHISP) HSP 1 Score: 124 bits (310), Expect = 5.800e-29 Identity = 78/217 (35.94%), Postives = 116/217 (53.46%), Query Frame = 1 Query: 4 ALQQRIRSFKTQASEAFQGDDLDAEEIAQRYANAEKSATIHEAELENLRQGQNQNEVRLKEERAAWKERLTTKLVAISEHMSRTFSKISVRSNVVLDEGDTGDDLSKFGIVIQVAFRASAPLQRLRATAQSGGERAITTMMYLIAMQHLTQCPFRCVDEMNQGMDSVYERFVFREIMDMCGKEPELDERGIEKTGKQYIVATPKLLPNLRYDDHCRV 654 ALQ+ +T+ +GD E++ + Y EK+ + E+ + Q + ++K + W L L I + F+K+ + LD+G + +D K+G+ I V FRAS LQ+L AQSGGERA++T +YL+A+Q LT PFRCVDE+NQGMD V ER +F+ ++ + E QY + TPKLL NL Y+D V Sbjct: 694 ALQEHCYELQTRIDCMDKGD----EQVIKEYEEREKTIAQLKKEVSSSSDSNKQLDNKMKALSSKWLPPLERLLRDIDKSFGDMFAKLGCAGEIKLDKGGSDEDYDKYGVSILVRFRASEQLQQLTRHAQSGGERALSTALYLMALQRLTTVPFRCVDEINQGMDPVNERKMFQLLVRVT----------TECDNAQYFLLTPKLLTNLEYNDKIMV 896
BLAST of mRNA_M-pyrifera_M_contig86638.20154.1 vs. uniprot
Match: A0A210QBR8_MIZYE (Structural maintenance of chromosomes protein 5 n=2 Tax=Mizuhopecten yessoensis TaxID=6573 RepID=A0A210QBR8_MIZYE) HSP 1 Score: 124 bits (310), Expect = 5.910e-29 Identity = 74/212 (34.91%), Postives = 115/212 (54.25%), Query Frame = 1 Query: 19 IRSFKTQASEAFQGDDLDAEEIAQRYANAEKSATIHEAELENLRQGQNQNEVRLKEERAAWKERLTTKLVAISEHMSRTFSKISVRSNVVLDEGDTGDDLSKFGIVIQVAFRASAPLQRLRATAQSGGERAITTMMYLIAMQHLTQCPFRCVDEMNQGMDSVYERFVFREIMDMCGKEPELDERGIEKTGKQYIVATPKLLPNLRYDDHCRV 654 I + +A FQ D + I + Y +K EAELE R+ ++ ++ + W E L + I+++ S FS ++ + L + + +D K+G+ I+V FR + L+ L QSGGER++ T++Y++A+Q L +CPFRCVDE+NQGMD V ER VF ++ K K+ QY + TPKLLP+L Y D+ V Sbjct: 800 IHEEQARADSLFQAD----KSIVKEYEARKKEIAALEAELEKRRRTMAGHQEEIERAKQQWLEPLKGLIDTINDNFSYFFSCMNCAGEIELHQPENQEDYEKYGVKIKVKFRDAESLRELTPHHQSGGERSVATVLYMMALQELAKCPFRCVDEINQGMDPVNERKVFELVVQTVCK----------KSSSQYFLLTPKLLPDLLYADNMTV 997
BLAST of mRNA_M-pyrifera_M_contig86638.20154.1 vs. uniprot
Match: A0A8J5NBN1_HOMAM (Structural maintenance of chromosomes protein 5 n=2 Tax=Homarus americanus TaxID=6706 RepID=A0A8J5NBN1_HOMAM) HSP 1 Score: 123 bits (309), Expect = 7.960e-29 Identity = 70/216 (32.41%), Postives = 115/216 (53.24%), Query Frame = 1 Query: 13 QRIRSFKTQASEAFQG--DDLDAEEIAQRYANAEKSATIHEAELENLRQGQNQNEVRLKEERAAWKERLTTKLVAISEHMSRTFSKISVRSNVVLDEGDTGDDLSKFGIVIQVAFRASAPLQRLRATAQSGGERAITTMMYLIAMQHLTQCPFRCVDEMNQGMDSVYERFVFREIMDMCGKEPELDERGIEKTGKQYIVATPKLLPNLRYDDHCRV 654 Q + +K +A A Q L + + E + + +L+N + + + L+E R W R++ + I + ++ ++ + LD+G+ DD SK+GI+I+V FR + L+ L A QSGGERA++T +YL+A+Q LT PFRCVDE+NQGMD + ER + +M+ E QY +PKL+P++ Y+D+ V Sbjct: 725 QEVTQYKLEAQGALQKLFTALKLNSEVKEFNTREAEVQVLQKKLDNTQVAADNHHRELEESRLRWLPRISELIENIDKSFAQFMGRLGCAGEISLDKGEMEDDFSKYGIMIKVRFRDNDRLRELTAQHQSGGERAVSTALYLLALQSLTSVPFRCVDEINQGMDPINERQMLNMLMETVASE----------CSSQYFFVSPKLIPDMIYNDYVNV 930
BLAST of mRNA_M-pyrifera_M_contig86638.20154.1 vs. uniprot
Match: UPI00035950BA (structural maintenance of chromosomes protein 5 n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI00035950BA) HSP 1 Score: 123 bits (309), Expect = 8.110e-29 Identity = 79/219 (36.07%), Postives = 118/219 (53.88%), Query Frame = 1 Query: 7 LQQRIRSFKTQASEAFQGDDLDAEEIAQRYANAEKSATIHEAEL---ENLRQGQNQNEVRLKEERAAWKERLTTKLVAISEHMSRTFSKISVRSNVVLDEGDTGDDLSKFGIVIQVAFRASAPLQRLRATAQSGGERAITTMMYLIAMQHLTQCPFRCVDEMNQGMDSVYERFVFREIMDMCGKEPELDERGIEKTGKQYIVATPKLLPNLRYDDHCRV 654 L I S + +A FQ D E++ + Y EK + E L E+ R ++ RL+EE W L + I+++ S FS + V L+ + +D K+G+ I+V FR L+ L A QSGGER+++T++Y++A+Q LT CPFRCVDE+NQGMD ER +F+ ++ K ++ QY + TPKLLP+L Y DH V Sbjct: 850 LDGEIHSIQARAESMFQVD----EQVVREYEKREKEIKVMEESLNQRESQRHTHQEDVSRLREE---WLGPLNELINRINQNFSFFFSSLQCCGEVSLNVPENPEDYEKYGVSIKVKFRDYENLRELTAHHQSGGERSVSTVLYMMALQELTLCPFRCVDEINQGMDPRNERKIFQLVVQTVCK----------RSTSQYFLLTPKLLPDLEYGDHMTV 1051 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig86638.20154.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig86638.20154.1 >prot_M-pyrifera_M_contig86638.20154.1 ID=prot_M-pyrifera_M_contig86638.20154.1|Name=mRNA_M-pyrifera_M_contig86638.20154.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=218bp EALQQRIRSFKTQASEAFQGDDLDAEEIAQRYANAEKSATIHEAELENLRback to top mRNA from alignment at M-pyrifera_M_contig86638:12..665- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig86638.20154.1 ID=mRNA_M-pyrifera_M_contig86638.20154.1|Name=mRNA_M-pyrifera_M_contig86638.20154.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=654bp|location=Sequence derived from alignment at M-pyrifera_M_contig86638:12..665- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig86638:12..665- >mRNA_M-pyrifera_M_contig86638.20154.1 ID=mRNA_M-pyrifera_M_contig86638.20154.1|Name=mRNA_M-pyrifera_M_contig86638.20154.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1308bp|location=Sequence derived from alignment at M-pyrifera_M_contig86638:12..665- (Macrocystis pyrifera P11B4 male)back to top |