mRNA_M-pyrifera_M_contig86230.20093.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig86230.20093.1 vs. uniprot
Match: I0ZAU6_COCSC (EGF-like domain-containing protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0ZAU6_COCSC) HSP 1 Score: 124 bits (312), Expect = 5.510e-29 Identity = 67/162 (41.36%), Postives = 89/162 (54.94%), Query Frame = 1 Query: 4 WGACNVTCGGGVRRRTVQCVDGSGAA----ASGCVG-TAPASSVVCNSRQCVTHALEVGEWGACNTTCGGGVQSRTVRCVASTGGSVALSQCGGSAPRSSVACGTAPCPGSLCVGRTCSGRGACNATSGACACESGFSGVNCEQQAGCAGVVDGSGQCCPSG 474 W CN TCGGG R V CVD +G A A+ C G APA++ CN+ C+ + ++G WG C+ CGGG+ R V CV TG +V ++C G P + C PC C C+G+G C G C C+ GF G CE C+G++D SG CCP+G Sbjct: 266 WSRCNATCGGGTMTRPVTCVDANGNAVADPAAACKGLAAPAAAAACNTAPCLGYTWQIGAWGNCSLACGGGIMERAVTCVDETGQAVNGTECSGVQPADQLQCNVLPCD--FCSLTNCAGQGVCK--KGVCVCQPGFRGSYCEIPPSCSGILDQSGNCCPTG 423
BLAST of mRNA_M-pyrifera_M_contig86230.20093.1 vs. uniprot
Match: A0A3B9XKE5_9PROT (Uncharacterized protein n=1 Tax=Bdellovibrionales bacterium TaxID=2053517 RepID=A0A3B9XKE5_9PROT) HSP 1 Score: 82.8 bits (203), Expect = 1.430e-14 Identity = 50/109 (45.87%), Postives = 64/109 (58.72%), Query Frame = 1 Query: 4 WGACNVTCGGGVRRRTVQCVDGSGAAA--SGC--VGTAPASSVVCNSRQC-VTHALEVGEWGACNTTCGGGVQSRTVRCVASTGGSVALSQCGGSAPRSSVACGTAPCP 315 +G C+V CGGG++ ++V C G G S C VG P SS CN + C T+A VG WG C+ +CGGG QSRTV C S+G +VA S C S P + +C T CP Sbjct: 56 FGMCSVPCGGGIQTQSVTCRRGDGVTVDDSFCQDVGVKPNSSRSCNIQACSTTYAWNVGTWGVCSKSCGGGTQSRTVACQTSSGDTVADSYCTSSKPAVNQSCNTDACP 164
BLAST of mRNA_M-pyrifera_M_contig86230.20093.1 vs. uniprot
Match: A0A4P7ZCR5_9PROT (Uncharacterized protein n=2 Tax=unclassified Azospirillum TaxID=2630922 RepID=A0A4P7ZCR5_9PROT) HSP 1 Score: 75.9 bits (185), Expect = 3.130e-12 Identity = 48/106 (45.28%), Postives = 57/106 (53.77%), Query Frame = 1 Query: 4 WGACNVTCGGGVRRRTVQCV--DGSGAAASGCVGTAPASSVVCNSRQCVTHALEVGEWGACNTTCGGGVQSRTVRCVASTGGSVALSQCGGSAPRSSVACGTAPCP 315 WGAC CG R R+V C DG A S C P + C S T+A +VG+WG C+ +CGGG +SR+V C S G V S CG SAP SS C T CP Sbjct: 307 WGACENACGASSRSRSVWCERSDGVTVADSFCGAGKPQAVEACTSYATCTYAWQVGDWGGCSASCGGGWRSRSVWCRRSNGEQVDGSYCG-SAPASSEQCNTQACP 411
BLAST of mRNA_M-pyrifera_M_contig86230.20093.1 vs. uniprot
Match: A0A0L0DTW1_THETB (Uncharacterized protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DTW1_THETB) HSP 1 Score: 75.5 bits (184), Expect = 4.960e-12 Identity = 46/109 (42.20%), Postives = 64/109 (58.72%), Query Frame = 1 Query: 4 WGACNVTCGGGVRRRTVQCVDGSGAAASGCV----GTAPASSVVCNSRQCVTHALEVGEWGACNTTCGGGVQSRTVRCVAS-TGGSVALSQC-GGSAPRSSVACGTAPC 312 +GAC+V+CGGGV R V C SG + P++S CN++ C T++ + G +GAC+ CGGG QSR+V CV S TG VA + C GS P +S +C + C Sbjct: 544 YGACSVSCGGGVATRPVTCQLASGTVIDDALCEIEAAKPSTSQACNTQSCATYSWQTGSFGACSVACGGGSQSRSVDCVESATGTIVAETNCDAGSKPATSQSCNSQVC 652
BLAST of mRNA_M-pyrifera_M_contig86230.20093.1 vs. uniprot
Match: A0A8D8YYB5_9HEMI (A disintegrin and metalloproteinase with thrombospondin motifs 9 n=6 Tax=Cacopsylla melanoneura TaxID=428564 RepID=A0A8D8YYB5_9HEMI) HSP 1 Score: 73.2 bits (178), Expect = 3.470e-11 Identity = 40/89 (44.94%), Postives = 47/89 (52.81%), Query Frame = 1 Query: 1 RWGACNVTCGGGVRRRTVQCVDGSGAAASGCV-GTAPASSVVCNSRQCVTHALEVGEWGACNTTCGGGVQSRTVRCVASTGGSVALSQC 264 RW C+ CGGG+RRRTV+C + C G P SS CN CVT G W CN+TCGGG Q R V C G ++A S C Sbjct: 1414 RWSECSAACGGGIRRRTVECYNELNQLGRTCEPGEKPESSGTCNEHPCVTGDWIYGGWSECNSTCGGGHQHRQVECQDRAGITLAESSC 1502
BLAST of mRNA_M-pyrifera_M_contig86230.20093.1 vs. uniprot
Match: A0A6J2VKU0_CHACN (A disintegrin and metalloproteinase with thrombospondin motifs 9 n=1 Tax=Chanos chanos TaxID=29144 RepID=A0A6J2VKU0_CHACN) HSP 1 Score: 71.2 bits (173), Expect = 1.560e-10 Identity = 48/116 (41.38%), Postives = 59/116 (50.86%), Query Frame = 1 Query: 4 WGACNVTCGGGVRRRTVQCVDGSGAAASG--CVGTA-PASSVVCNSRQCVTHALEVGEWGACNTTCGGGVQSRTVRCVASTGGS-------VALSQCGGSAPRSSVACGTAPCPGS 321 W AC+ TCG G+RRRTV C+D SG CVG P S CN++ C + GEW C+ TCG G Q R V C G+ +LS C G+ P S + C PCP S Sbjct: 1560 WQACSQTCGSGLRRRTVACLDPSGEEVHEMYCVGQRKPTESEPCNTQPCEFIWI-TGEWTECSVTCGQGYQRRLVSCSEVHAGNDNYEYGHQSLSNCPGNPPESFMVCNLTPCPSS 1674
BLAST of mRNA_M-pyrifera_M_contig86230.20093.1 vs. uniprot
Match: A0A8D9FFH3_9HEMI (A disintegrin and metalloproteinase with thrombospondin motifs 9 n=1 Tax=Cacopsylla melanoneura TaxID=428564 RepID=A0A8D9FFH3_9HEMI) HSP 1 Score: 70.5 bits (171), Expect = 2.790e-10 Identity = 36/76 (47.37%), Postives = 41/76 (53.95%), Query Frame = 1 Query: 1 RWGACNVTCGGGVRRRTVQCVDGSGAAASGCV-GTAPASSVVCNSRQCVTHALEVGEWGACNTTCGGGVQSRTVRC 225 RW C+ CGGG+RRRTV+C + C G P SS CN CVT G W CN+TCGGG Q R V C Sbjct: 1409 RWSECSAACGGGIRRRTVECYNELNQLGRTCEPGEKPESSGTCNEHPCVTGDWIYGGWSECNSTCGGGHQHRQVEC 1484
BLAST of mRNA_M-pyrifera_M_contig86230.20093.1 vs. uniprot
Match: A0A8D0G8S9_SPHPU (Papilin, proteoglycan like sulfated glycoprotein n=2 Tax=Sphenodon punctatus TaxID=8508 RepID=A0A8D0G8S9_SPHPU) HSP 1 Score: 70.1 bits (170), Expect = 3.640e-10 Identity = 36/82 (43.90%), Postives = 49/82 (59.76%), Query Frame = 1 Query: 4 WGACNVTCGGGVRRRTVQCVDGSGAAASGCVGTA--------PASSVVCNSRQCVTHALEVGEWGACNTTCGGGVQSRTVRC 225 WGAC+ TCGGG + R+V C+ +G + G V A P S+ CN RQC T ++ G W C+++CG GVQ+RTV C Sbjct: 366 WGACSATCGGGTQTRSVYCISYNGQGSQGAVNDAECVALAERPHSTQACNMRQCATWSM--GPWSECSSSCGEGVQTRTVIC 445
BLAST of mRNA_M-pyrifera_M_contig86230.20093.1 vs. uniprot
Match: A0A8D0G8Z7_SPHPU (Papilin, proteoglycan like sulfated glycoprotein n=1 Tax=Sphenodon punctatus TaxID=8508 RepID=A0A8D0G8Z7_SPHPU) HSP 1 Score: 70.1 bits (170), Expect = 3.670e-10 Identity = 36/82 (43.90%), Postives = 49/82 (59.76%), Query Frame = 1 Query: 4 WGACNVTCGGGVRRRTVQCVDGSGAAASGCVGTA--------PASSVVCNSRQCVTHALEVGEWGACNTTCGGGVQSRTVRC 225 WGAC+ TCGGG + R+V C+ +G + G V A P S+ CN RQC T ++ G W C+++CG GVQ+RTV C Sbjct: 357 WGACSATCGGGTQTRSVYCISYNGQGSQGAVNDAECVALAERPHSTQACNMRQCATWSM--GPWSECSSSCGEGVQTRTVIC 436
BLAST of mRNA_M-pyrifera_M_contig86230.20093.1 vs. uniprot
Match: A0A7K8N0X9_CASCA (PPN protein (Fragment) n=1 Tax=Casuarius casuarius TaxID=8787 RepID=A0A7K8N0X9_CASCA) HSP 1 Score: 68.9 bits (167), Expect = 9.120e-10 Identity = 38/82 (46.34%), Postives = 47/82 (57.32%), Query Frame = 1 Query: 4 WGACNVTCGGGVRRRTVQCVDGSGAAASGCVGTA--------PASSVVCNSRQCVTHALEVGEWGACNTTCGGGVQSRTVRC 225 WG+C+ TCGGG + R+V CV G ++ G V A P SS CN RQC T + G W C+T+CG GVQ RTV C Sbjct: 351 WGSCSATCGGGTQTRSVYCVAYDGQSSQGVVDNAECMAFAQQPRSSQPCNMRQCATWST--GPWSECSTSCGEGVQIRTVTC 430 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig86230.20093.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig86230.20093.1 >prot_M-pyrifera_M_contig86230.20093.1 ID=prot_M-pyrifera_M_contig86230.20093.1|Name=mRNA_M-pyrifera_M_contig86230.20093.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=236bp RWGACNVTCGGGVRRRTVQCVDGSGAAASGCVGTAPASSVVCNSRQCVTHback to top mRNA from alignment at M-pyrifera_M_contig86230:126..833- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig86230.20093.1 ID=mRNA_M-pyrifera_M_contig86230.20093.1|Name=mRNA_M-pyrifera_M_contig86230.20093.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=708bp|location=Sequence derived from alignment at M-pyrifera_M_contig86230:126..833- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig86230:126..833- >mRNA_M-pyrifera_M_contig86230.20093.1 ID=mRNA_M-pyrifera_M_contig86230.20093.1|Name=mRNA_M-pyrifera_M_contig86230.20093.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1416bp|location=Sequence derived from alignment at M-pyrifera_M_contig86230:126..833- (Macrocystis pyrifera P11B4 male)back to top |