prot_M-pyrifera_M_contig8617.20082.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig8617.20082.1
Unique Nameprot_M-pyrifera_M_contig8617.20082.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length297
Homology
BLAST of mRNA_M-pyrifera_M_contig8617.20082.1 vs. uniprot
Match: D7G428_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G428_ECTSI)

HSP 1 Score: 176 bits (445), Expect = 5.570e-49
Identity = 104/311 (33.44%), Postives = 149/311 (47.91%), Query Frame = 0
Query:    1 GALPAFPLSTKEVKIRMGYYTEGGKYLGGVPKYDE-KHGTYQCSDLNY------ELGTYNTASGGNATVCMSWATANPGQNNTSEGEQAEATTTNAEYCAEWTCGVQDAGNTLTCPGGVTPCSLDYEPVETTAICTCGTAEESGKFCAAWTCRGWDANGVEESEEFQCVRDSPSGEYCDGWTSVLERPKEIQVSTCDCIGQWNGDGVCTYWECEERSMPVCSHANDPHMSWCNIGIAVGLWGLLGSIGAF-----FVASGL-------MRLVEDSCVNVFVLGTFLMVVFSVPVVIWGGQDGAVYVGIMWG 292
            G  P +P++  ++K+  GYYTE GKYLGG+PK D      Y+C+   Y      +  T +T     AT CM W           +G     +  N  YC+ WTC            G     S + + V    +C C     SG +C +W+C+  D++G EE EE+ C R+             +    E++V TC+C+  W+GD +C+YWECEE  +  C+        WC++G+++GL G+ G  GA      F + G        MR V  + V     G    +V+SV VVIWGG DG VYVGIMWG
Sbjct:   51 GVYPDYPMTFADMKVLAGYYTEDGKYLGGIPKADPVSKEIYECAADTYFYPSGNDTVTDSTDGKDEATACMEWRADESAGGVFQKGTCECTSIDNENYCSAWTCNQVKEEEDCNSSGSNCVVSTNTDAV----LCQCDLDVPSGLYCDSWSCKQIDSDGREEFEEYHCQREXXXXXXXXXXNGNVTASDEVEVVTCECVATWSGDRLCSYWECEEIGLSSCNSTR----GWCDLGLSIGLAGVFGLAGALAAGFSFASFGCFERSTTGMRAVVCTGVG----GILWCMVWSVGVVIWGGLDGVVYVGIMWG 349          
BLAST of mRNA_M-pyrifera_M_contig8617.20082.1 vs. uniprot
Match: D7FR75_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR75_ECTSI)

HSP 1 Score: 157 bits (398), Expect = 4.300e-42
Identity = 94/301 (31.23%), Postives = 143/301 (47.51%), Query Frame = 0
Query:    3 LPAFPLSTKEVKIRMGYYTEGGKYLGGVPK-YDEKHGTYQCSDLNYELGTYNTASGGNATVCMSWATANPGQNNTSEGEQAEATTTNAEYCAEWTCGVQDAGNTLTCPGGVTPCSLDYEPVETTAICTCG-TAEESGKFCAAWTCRGWDANGVEESEEFQCVRDSPSGEYCDGWTSVLERPKEIQVSTCDCIGQWNGDGVCTYWECEERSMPVCSHANDPHMSWCNIGIAVGLWGLLGSIGAFFVASGLMRL-------VEDSCVNVF--VLGTFLMVVFSVPVVIWGGQDGAVYVGIMWG 292
            LP FP++  ++++  GYY+  GKYLGG+PK +      Y C+D  Y     NTAS  NAT C  W+              A+ +        +  C                  + DY       +C C  T    G      +C+   + G  E E+++C R SPSG YC+ W   +    E ++ +C+C+  W+GD VC++WECEE  +  CS A     SWC++G+++G+ G +G +G   +  G+  +         D+   +    LGT   + +S  VVIWGG+ GA YVGIMWG
Sbjct:   55 LPDFPMTLADMEVLAGYYSADGKYLGGMPKAHTLSREIYDCTDFQYSEPN-NTAS--NATYCTGWS--------------ADESYGGGFQLGDCECKFSXXXXXXXXXXXXXQENSDY------TLCQCDDTGAAEGLXXXXXSCKQICSGGRAEFEDYRCQRPSPSGHYCEAWNGNVTASDEFEIVSCECLANWHGDQVCSFWECEELGLSTCSSAG---ASWCDLGVSIGVGGGIGLLGVLVICYGIGLVGRIDSEGQSDTTAGLMGIALGTVWCLSWSSGVVIWGGEAGATYVGIMWG 329          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8617.20082.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G428_ECTSI5.570e-4933.44Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FR75_ECTSI4.300e-4231.23Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 227..246
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 247..257
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..226
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 281..297
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 258..280
NoneNo IPR availableTMHMMTMhelixcoord: 227..249
NoneNo IPR availableTMHMMTMhelixcoord: 256..278

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig8617contigM-pyrifera_M_contig8617:5905..7690 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig8617.20082.1mRNA_M-pyrifera_M_contig8617.20082.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig8617 5905..7690 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig8617.20082.1 ID=prot_M-pyrifera_M_contig8617.20082.1|Name=mRNA_M-pyrifera_M_contig8617.20082.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=297bp
GALPAFPLSTKEVKIRMGYYTEGGKYLGGVPKYDEKHGTYQCSDLNYELG
TYNTASGGNATVCMSWATANPGQNNTSEGEQAEATTTNAEYCAEWTCGVQ
DAGNTLTCPGGVTPCSLDYEPVETTAICTCGTAEESGKFCAAWTCRGWDA
NGVEESEEFQCVRDSPSGEYCDGWTSVLERPKEIQVSTCDCIGQWNGDGV
CTYWECEERSMPVCSHANDPHMSWCNIGIAVGLWGLLGSIGAFFVASGLM
RLVEDSCVNVFVLGTFLMVVFSVPVVIWGGQDGAVYVGIMWGAIILV
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