prot_M-pyrifera_M_contig86051.20056.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig86051.20056.1
Unique Nameprot_M-pyrifera_M_contig86051.20056.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length212
Homology
BLAST of mRNA_M-pyrifera_M_contig86051.20056.1 vs. uniprot
Match: A0A813A9X5_9DINO (Eif3l protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813A9X5_9DINO)

HSP 1 Score: 62.8 bits (151), Expect = 5.780e-8
Identity = 42/150 (28.00%), Postives = 74/150 (49.33%), Query Frame = 0
Query:    1 DLLDLYEADRRNLTTNYFSTKEWPSLAVAEASLHIRIPGREAISRRSGSVPREVFGMLYELLWFKHALLVLPSKESPAPVAVMEASFAAYERFCTFFLSLDSA----SSFALPAEWSYDVLNELVYICQLYHERRCAHA---VSGSEGAA 143
            D+L++YE   R ++  +F+   WP               RE +     +   + F +LY LL+FKH L+ LP+ E+PA  +    ++  Y  F  F L    A    ++  LPA+W +++++E V+  + +H+RR   A   V+  +G A
Sbjct:   32 DILNMYEKGFRTISKEHFAESTWPE--------------REEVKELLDA--DDSFMVLYNLLYFKHLLVTLPTPENPARSSHYADAWDRYRDFFDFVLERVEAPPGGATLNLPAKWVFNIMDEFVWYYETFHKRRNERARALVAADDGDA 165          
BLAST of mRNA_M-pyrifera_M_contig86051.20056.1 vs. uniprot
Match: R1CDX2_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CDX2_EMIHU)

HSP 1 Score: 58.9 bits (141), Expect = 1.000e-6
Identity = 50/168 (29.76%), Postives = 78/168 (46.43%), Query Frame = 0
Query:    6 YEADRRNLTTNYFSTKEWPSLAVAEASLHIRIPGREAISRRSGSVPREVFGMLYELLWFKHALLVLPSKESPAPVAVMEASFAAYERFCTFFLSLDSASSFALPAEWSYDVLNELVYICQLYHERRCAHAVSGSEGAA---PRAELWSIPSVLSLLRRLFRESGVEAR 170
            YEA    LT   + T  WP+  V        + G +A            F +LY  L+F+H    L S+ +P     ++ S+A YE   +  L  D+ +  ALP +W +D+++EL+Y  Q +   R       +E  A    R ++WS+ SVL +L R+  E G E R
Sbjct:   72 YEATFNKLTDRLYKTSPWPTAEVVSP-----LVGGDA-----------TFLLLYRELYFRH----LYSRLTPTLQQRID-SWANYEALFSLLLDGDAPADLALPNQWIWDLVDELIYQFQAWSMFRQRLKSKSAEEIAILKQRTDVWSVTSVLGMLHRMA-ERGKEPR 217          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig86051.20056.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A813A9X5_9DINO5.780e-828.00Eif3l protein (Fragment) n=1 Tax=Symbiodinium sp. ... [more]
R1CDX2_EMIHU1.000e-629.76Uncharacterized protein n=1 Tax=Emiliania huxleyi ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019382Translation initiation factor 3 complex subunit LPFAMPF10255Paf67coord: 85..212
e-value: 4.8E-14
score: 52.2
IPR019382Translation initiation factor 3 complex subunit LPANTHERPTHR13242EUKARYOTIC TRANSLATION INITIATION FACTOR 3coord: 3..212
NoneNo IPR availablePANTHERPTHR13242:SF0EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT Lcoord: 3..212

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig86051contigM-pyrifera_M_contig86051:219..854 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig86051.20056.1mRNA_M-pyrifera_M_contig86051.20056.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig86051 219..854 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig86051.20056.1 ID=prot_M-pyrifera_M_contig86051.20056.1|Name=mRNA_M-pyrifera_M_contig86051.20056.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=212bp
DLLDLYEADRRNLTTNYFSTKEWPSLAVAEASLHIRIPGREAISRRSGSV
PREVFGMLYELLWFKHALLVLPSKESPAPVAVMEASFAAYERFCTFFLSL
DSASSFALPAEWSYDVLNELVYICQLYHERRCAHAVSGSEGAAPRAELWS
IPSVLSLLRRLFRESGVEARLKEAGSASGSGGSGGASVAEATTQVGYFAL
ACYIRLQTKLCD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019382eIF3l