prot_M-pyrifera_M_contig85939.20033.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig85939.20033.1
Unique Nameprot_M-pyrifera_M_contig85939.20033.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length103
Homology
BLAST of mRNA_M-pyrifera_M_contig85939.20033.1 vs. uniprot
Match: A0A3Q3B1L8_KRYMA (CYCLIN domain-containing protein n=2 Tax=Rivulidae TaxID=28771 RepID=A0A3Q3B1L8_KRYMA)

HSP 1 Score: 68.9 bits (167), Expect = 2.840e-12
Identity = 32/98 (32.65%), Postives = 65/98 (66.33%), Query Frame = 0
Query:    7 RWVVTREELEASPSRLDGVSLDMEVEYAHKSCLLLDHLAE-LTLAKAVASTAMVLLHRFFSRQSYSRHYRDLVASACFFLACKLEESVVRIEVVAKVS 103
            +W+ TRE+L+A+PSR  G+  D E+ Y  ++  L+  + + L +++ + +TA+V +HRF+   S+++ +R++++    FLA K+EE   ++E V K++
Sbjct:   10 KWLFTREQLDATPSRRCGIEADRELSYRQQAANLIQDIGQRLNVSQLIINTAIVYMHRFYMIHSFTKFHRNIISQTTLFLAAKVEEQPRKLEHVIKIA 107          
BLAST of mRNA_M-pyrifera_M_contig85939.20033.1 vs. uniprot
Match: UPI0018ACB76D (cyclin-T2 n=1 Tax=Kryptolebias marmoratus TaxID=37003 RepID=UPI0018ACB76D)

HSP 1 Score: 68.9 bits (167), Expect = 8.480e-12
Identity = 32/98 (32.65%), Postives = 65/98 (66.33%), Query Frame = 0
Query:    7 RWVVTREELEASPSRLDGVSLDMEVEYAHKSCLLLDHLAE-LTLAKAVASTAMVLLHRFFSRQSYSRHYRDLVASACFFLACKLEESVVRIEVVAKVS 103
            +W+ TRE+L+A+PSR  G+  D E+ Y  ++  L+  + + L +++ + +TA+V +HRF+   S+++ +R++++    FLA K+EE   ++E V K++
Sbjct:   10 KWLFTREQLDATPSRRCGIEADRELSYRQQAANLIQDIGQRLNVSQLIINTAIVYMHRFYMIHSFTKFHRNIISQTTLFLAAKVEEQPRKLEHVIKIA 107          
BLAST of mRNA_M-pyrifera_M_contig85939.20033.1 vs. uniprot
Match: A0A813ZH03_9BILA (Hypothetical protein n=2 Tax=Brachionus calyciflorus TaxID=104777 RepID=A0A813ZH03_9BILA)

HSP 1 Score: 69.3 bits (168), Expect = 1.370e-11
Identity = 34/90 (37.78%), Postives = 61/90 (67.78%), Query Frame = 0
Query:    5 EHRWVVTREELEASPSRLDGVSLDMEVEYAHKSCLLLDHLA-ELTLAKAVASTAMVLLHRFFSRQSYSRHYR--DLVASACFFLACKLEE 91
            E RW+ T+E+++ SPSR++G+S + E++   ++ L +  L  EL + +   +TA++ +HRFF   S+ + +R   +VA++C FLACK+EE
Sbjct:   64 ETRWIFTKEKIDNSPSRMEGLSAEQELKERQEAALFISDLGIELKVNQLCINTAIIYMHRFFMIHSFKKFHRYVRMVATSCLFLACKVEE 153          
BLAST of mRNA_M-pyrifera_M_contig85939.20033.1 vs. uniprot
Match: UPI00090122CF (cyclin-T1-3-like isoform X4 n=1 Tax=Ipomoea nil TaxID=35883 RepID=UPI00090122CF)

HSP 1 Score: 68.9 bits (167), Expect = 1.840e-11
Identity = 37/88 (42.05%), Postives = 56/88 (63.64%), Query Frame = 0
Query:    7 RWVVTREELEA-SPSRLDGVSLDMEVEYAHKSCLLLDHLA-ELTLAKAVASTAMVLLHRFFSRQSYSRHYRDLVASACFFLACKLEES 92
            RW  +REE+E  SPSR DG+  + E       C  L  L  EL   +   +TAM+L H+F+ RQS+++++  ++A+AC FLACK+EE+
Sbjct:   32 RWYFSREEIENHSPSRKDGIDYEKESGLRKLYCSFLQELGIELKGPQVTIATAMLLCHQFYMRQSHTKNHWQIIATACMFLACKVEET 119          
BLAST of mRNA_M-pyrifera_M_contig85939.20033.1 vs. uniprot
Match: UPI0009012BAE (cyclin-T1-3-like isoform X1 n=6 Tax=Ipomoea TaxID=4119 RepID=UPI0009012BAE)

HSP 1 Score: 68.9 bits (167), Expect = 1.900e-11
Identity = 37/88 (42.05%), Postives = 56/88 (63.64%), Query Frame = 0
Query:    7 RWVVTREELEA-SPSRLDGVSLDMEVEYAHKSCLLLDHLA-ELTLAKAVASTAMVLLHRFFSRQSYSRHYRDLVASACFFLACKLEES 92
            RW  +REE+E  SPSR DG+  + E       C  L  L  EL   +   +TAM+L H+F+ RQS+++++  ++A+AC FLACK+EE+
Sbjct:   32 RWYFSREEIENHSPSRKDGIDYEKESGLRKLYCSFLQELGIELKGPQVTIATAMLLCHQFYMRQSHTKNHWQIIATACMFLACKVEET 119          
BLAST of mRNA_M-pyrifera_M_contig85939.20033.1 vs. uniprot
Match: M5XN82_PRUPE (Uncharacterized protein n=8 Tax=Prunus TaxID=3754 RepID=M5XN82_PRUPE)

HSP 1 Score: 65.5 bits (158), Expect = 2.840e-10
Identity = 35/91 (38.46%), Postives = 58/91 (63.74%), Query Frame = 0
Query:    4 SEHRWVVTREELE-ASPSRLDGVSLDMEVEYAHKSCLLLDHLA-ELTLAKAVASTAMVLLHRFFSRQSYSRHYRDLVASACFFLACKLEES 92
            S  +W  TR+E+E  SPSR DG+SL  E +     C  L  +  +L +++   + AM+L HRF+ RQS++++   ++A+A FFLACK+ ++
Sbjct:   32 SMRKWYFTRQEIEDQSPSRRDGISLKKESQLRDSYCSFLQAIGMKLKVSQTTIACAMMLCHRFYMRQSHAKNGWQVIATASFFLACKVRDT 122          
BLAST of mRNA_M-pyrifera_M_contig85939.20033.1 vs. uniprot
Match: UPI000539BB1B (LOW QUALITY PROTEIN: cyclin-T1-2-like n=2 Tax=Camelina sativa TaxID=90675 RepID=UPI000539BB1B)

HSP 1 Score: 65.5 bits (158), Expect = 3.020e-10
Identity = 38/92 (41.30%), Postives = 57/92 (61.96%), Query Frame = 0
Query:    8 WVVTREELEA-SPSRLDGVSLDMEVEYAHKSCLLLDHLAE-LTLAKAVASTAMVLLHRFFSRQSYSRHYRDLVASACFFLACKLEESVVRIE 97
            W  TRE++E  SPSR DG+ L+ME    +  C  L++L E L L +   +TA V  HRFF RQS++++ R  +A+ C  LA K+ E+ V ++
Sbjct:   33 WXFTREDIETTSPSRRDGIDLNMENSLRNSYCSFLENLGERLKLPQVTIATATVFCHRFFIRQSHAKNDRWTIATVCMLLAGKVVETPVALK 124          
BLAST of mRNA_M-pyrifera_M_contig85939.20033.1 vs. uniprot
Match: A0A7J6EC76_CANSA (Uncharacterized protein n=1 Tax=Cannabis sativa TaxID=3483 RepID=A0A7J6EC76_CANSA)

HSP 1 Score: 64.7 bits (156), Expect = 5.540e-10
Identity = 37/88 (42.05%), Postives = 52/88 (59.09%), Query Frame = 0
Query:    7 RWVVTREELEA-SPSRLDGVSLDMEVEYAHKSCLLLDHLA-ELTLAKAVASTAMVLLHRFFSRQSYSRHYRDLVASACFFLACKLEES 92
            RW  +R E+E  SPSR DGV L  E       C  L  L   L + +   +TA++  HRFF RQS++++ R  +A+AC FLA K+EE+
Sbjct:   43 RWYFSRREIEENSPSRHDGVDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFHRQSHAKNDRRTIATACMFLAGKVEET 130          
BLAST of mRNA_M-pyrifera_M_contig85939.20033.1 vs. uniprot
Match: A0A803Q2T9_CANSA (Uncharacterized protein n=3 Tax=Cannabis sativa TaxID=3483 RepID=A0A803Q2T9_CANSA)

HSP 1 Score: 64.7 bits (156), Expect = 5.760e-10
Identity = 37/88 (42.05%), Postives = 52/88 (59.09%), Query Frame = 0
Query:    7 RWVVTREELEA-SPSRLDGVSLDMEVEYAHKSCLLLDHLA-ELTLAKAVASTAMVLLHRFFSRQSYSRHYRDLVASACFFLACKLEES 92
            RW  +R E+E  SPSR DGV L  E       C  L  L   L + +   +TA++  HRFF RQS++++ R  +A+AC FLA K+EE+
Sbjct:   32 RWYFSRREIEENSPSRHDGVDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFHRQSHAKNDRRTIATACMFLAGKVEET 119          
BLAST of mRNA_M-pyrifera_M_contig85939.20033.1 vs. uniprot
Match: A0A565CFD1_9BRAS (Uncharacterized protein n=1 Tax=Arabis nemorensis TaxID=586526 RepID=A0A565CFD1_9BRAS)

HSP 1 Score: 64.3 bits (155), Expect = 7.730e-10
Identity = 36/87 (41.38%), Postives = 55/87 (63.22%), Query Frame = 0
Query:    8 WVVTREELEA-SPSRLDGVSLDMEVEYAHKSCLLLDHLA-ELTLAKAVASTAMVLLHRFFSRQSYSRHYRDLVASACFFLACKLEES 92
            W  +REE+E  SPSR DG+ L  E+      C  L  L  +L + + + ++A+V  HRFF RQS++++ R  +A+AC FLA K+EE+
Sbjct:   31 WYFSREEVEKNSPSRRDGIDLKKEIRLRKSYCTFLKELGVKLKVPQIMIASAIVFCHRFFLRQSHAKNDRWTIATACMFLAGKVEET 117          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig85939.20033.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3Q3B1L8_KRYMA2.840e-1232.65CYCLIN domain-containing protein n=2 Tax=Rivulidae... [more]
UPI0018ACB76D8.480e-1232.65cyclin-T2 n=1 Tax=Kryptolebias marmoratus TaxID=37... [more]
A0A813ZH03_9BILA1.370e-1137.78Hypothetical protein n=2 Tax=Brachionus calyciflor... [more]
UPI00090122CF1.840e-1142.05cyclin-T1-3-like isoform X4 n=1 Tax=Ipomoea nil Ta... [more]
UPI0009012BAE1.900e-1142.05cyclin-T1-3-like isoform X1 n=6 Tax=Ipomoea TaxID=... [more]
M5XN82_PRUPE2.840e-1038.46Uncharacterized protein n=8 Tax=Prunus TaxID=3754 ... [more]
UPI000539BB1B3.020e-1041.30LOW QUALITY PROTEIN: cyclin-T1-2-like n=2 Tax=Came... [more]
A0A7J6EC76_CANSA5.540e-1042.05Uncharacterized protein n=1 Tax=Cannabis sativa Ta... [more]
A0A803Q2T9_CANSA5.760e-1042.05Uncharacterized protein n=3 Tax=Cannabis sativa Ta... [more]
A0A565CFD1_9BRAS7.730e-1041.38Uncharacterized protein n=1 Tax=Arabis nemorensis ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006671Cyclin, N-terminalPFAMPF00134Cyclin_Ncoord: 41..99
e-value: 2.3E-10
score: 40.3
NoneNo IPR availableGENE3D1.10.472.10coord: 1..103
e-value: 1.1E-25
score: 92.1
NoneNo IPR availablePANTHERPTHR10026CYCLINcoord: 8..102
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 66..103
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..46
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 47..65
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 5..102

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig85939contigM-pyrifera_M_contig85939:67..630 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig85939.20033.1mRNA_M-pyrifera_M_contig85939.20033.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig85939 67..651 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig85939.20033.1 ID=prot_M-pyrifera_M_contig85939.20033.1|Name=mRNA_M-pyrifera_M_contig85939.20033.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=103bp
MSVSEHRWVVTREELEASPSRLDGVSLDMEVEYAHKSCLLLDHLAELTLA
KAVASTAMVLLHRFFSRQSYSRHYRDLVASACFFLACKLEESVVRIEVVA
KVS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006671Cyclin_N
IPR036915Cyclin-like_sf