mRNA_M-pyrifera_M_contig85732.19986.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig85732.19986.1
Unique NamemRNA_M-pyrifera_M_contig85732.19986.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig85732.19986.1 vs. uniprot
Match: A0A7Y2DB71_9ACTN (CpaF family protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2DB71_9ACTN)

HSP 1 Score: 437 bits (1123), Expect = 1.860e-150
Identity = 214/286 (74.83%), Postives = 243/286 (84.97%), Query Frame = 1
Query:    1 YIDDPQWTDIHANGFDEVWLTAQDGSVVAGEPVADTDTELIELIQTQARRGRSEQRWDPASPELDMRLPSGDRLHAIAWVSGRPSVSIRRHNFDISRLKQLIGLGTISESLFHLLQAMVRARFNVIVAGGTGAGKTTLLRCLLNEVAPTERIITVEDSLEIGLEHFATLHPNRVDLEAREANLEGVGEFPMHRLVRSGLRMQPDRVIVGEVRGAEALPMMLAMSQGNDGSMCTIHADSSLGVFTRLQMYMAMTPERFDVEVTNLMIANAVHFVLHLGRLDSNERVV 858
            Y+DDPQ+TDI  NG D VWL+  DG+ V GE VADTD ELIE+IQT ARRGRSEQRWDPASPEL+M+LP+GDRLHAIAWV+GRPS+SIRRHNF I R  QL+   TISE+LFHLL AMV+ARFN+IVAGGTGAGKTTLLRCL+NE+   ER++TVEDSLEIGLEHF  LHP+ VDLE R  N+EGVG F M  L +SGLRM P RVIVGEVRGAEALPMM AMSQGNDGSMCTIHADSS GVF RLQMYMAMT ERFDVE TNLM++NA++FV+H+ + D NERV+
Sbjct:   91 YVDDPQYTDIVVNGCDVVWLSKLDGTKVRGEAVADTDDELIEMIQTAARRGRSEQRWDPASPELNMQLPTGDRLHAIAWVAGRPSISIRRHNFAIFRTDQLLERSTISEALFHLLNAMVKARFNIIVAGGTGAGKTTLLRCLINEIPANERLVTVEDSLEIGLEHFQELHPDFVDLETRNPNIEGVGGFTMAALTKSGLRMSPSRVIVGEVRGAEALPMMQAMSQGNDGSMCTIHADSSAGVFGRLQMYMAMTEERFDVETTNLMVSNAINFVVHIVKTDDNERVL 376          
BLAST of mRNA_M-pyrifera_M_contig85732.19986.1 vs. uniprot
Match: A0A349B249_9ACTN (Type II secretion system protein E (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A349B249_9ACTN)

HSP 1 Score: 367 bits (941), Expect = 4.590e-123
Identity = 181/287 (63.07%), Postives = 222/287 (77.35%), Query Frame = 1
Query:    1 YIDDPQWTDIHANGFDEVWLTAQDGSVVAGEPVADTDTELIELIQTQARRGR-SEQRWDPASPELDMRLPSGDRLHAIAWVSGRPSVSIRRHNFDISRLKQLIGLGTISESLFHLLQAMVRARFNVIVAGGTGAGKTTLLRCLLNEVAPTERIITVEDSLEIGLEHFATLHPNRVDLEAREANLEGVGEFPMHRLVRSGLRMQPDRVIVGEVRGAEALPMMLAMSQGNDGSMCTIHADSSLGVFTRLQMYMAMTPERFDVEVTNLMIANAVHFVLHLGRLDSNERVV 858
            Y+DDP  TDI   G D VWLT +DG+ V GE VAD+D EL E+IQ  ARRG  +E+ WD ASP+LD++L SGDRLHA+ WV+ RP+VSIRRHNFD+ RLKQL+   T+S SL H L+A VRA+ N+IVAG TGAGKTTLLRCLLNE+ P ER++T+EDSLE+G+  F  LHP+ ++ EAREAN EGVG + M +LVR  LRM P RV+VGE+RG E  PM+LAMSQGNDGSM T+HADSS  VF+RL MY AM+PE F  E T LM+ANAVH ++H+ RL + ERVV
Sbjct:   91 YLDDPDNTDITIYGHDVVWLTKRDGAKVPGEAVADSDAELREIIQAAARRGSLTEKTWDSASPDLDLQLASGDRLHALGWVTSRPAVSIRRHNFDLHRLKQLVP-ATVSPSLLHFLRAAVRAKLNMIVAGETGAGKTTLLRCLLNEIDPAERLVTIEDSLELGISRFEGLHPDLIEAEAREANTEGVGAYSMAKLVRQTLRMNPGRVVVGEIRGHEVTPMLLAMSQGNDGSMSTVHADSSAAVFSRLAMYTAMSPEGFGAETTALMVANAVHLIVHVARLPTGERVV 376          
BLAST of mRNA_M-pyrifera_M_contig85732.19986.1 vs. uniprot
Match: A0A3M2GVV1_ACTSX (CpaF family protein n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2GVV1_ACTSX)

HSP 1 Score: 367 bits (941), Expect = 1.170e-122
Identity = 187/285 (65.61%), Postives = 219/285 (76.84%), Query Frame = 1
Query:    4 IDDPQWTDIHANGFDEVWLTAQDGSVVAGEPVADTDTELIELIQTQARR-GRSEQRWDPASPELDMRLPSGDRLHAIAWVSGRPSVSIRRHNFDISRLKQLIGLGTISESLFHLLQAMVRARFNVIVAGGTGAGKTTLLRCLLNEVAPTERIITVEDSLEIGLEHFATLHPNRVDLEAREANLEGVGEFPMHRLVRSGLRMQPDRVIVGEVRGAEALPMMLAMSQGNDGSMCTIHADSSLGVFTRLQMYMAMTPERFDVEVTNLMIANAVHFVLHLGRLDSNERV 855
            +DDPQ  DIH +G   VWL  +DG+ V G  VAD+D ELIELI T ARR GRSE+RWD A PEL+++LP+GDRLHA+  VSGRP+V+IRRH+FDI RL QL+ LG   E L   + A V+AR N+IVAGGTG GKTT LRCL+NE+ P ER+IT+EDSLEIGLE F  LHP+   LEAREAN EGVG F +  LVRS LRM P RVIVGEVRGAE LPM+LAMSQGNDGSMC+IHADSS GVF RL MY AMTPER   EVTNL++ANAV  ++HLG +    R+
Sbjct:  105 LDDPQIRDIHISGAHRVWLNLRDGTKVRGPAVADSDDELIELIATAARRLGRSERRWDHAHPELNLQLPNGDRLHALMAVSGRPTVTIRRHDFDIHRLYQLVDLGVCDELLASFMSAAVQARANIIVAGGTGTGKTTTLRCLINEIPPDERLITIEDSLEIGLERFEHLHPDHETLEAREANTEGVGAFTLAALVRSALRMDPQRVIVGEVRGAEVLPMLLAMSQGNDGSMCSIHADSSKGVFGRLAMYAAMTPERLVPEVTNLLVANAVDLIVHLGWVRGIRRI 389          
BLAST of mRNA_M-pyrifera_M_contig85732.19986.1 vs. uniprot
Match: UPI001C62B0A1 (Flp pilus assembly complex ATPase component TadA n=1 Tax=Iamia sp. SCSIO 61187 TaxID=2722752 RepID=UPI001C62B0A1)

HSP 1 Score: 363 bits (933), Expect = 2.030e-121
Identity = 184/285 (64.56%), Postives = 218/285 (76.49%), Query Frame = 1
Query:    4 IDDPQWTDIHANGFDEVWLTAQDGSVVAGEPVADTDTELIELIQTQARR-GRSEQRWDPASPELDMRLPSGDRLHAIAWVSGRPSVSIRRHNFDISRLKQLIGLGTISESLFHLLQAMVRARFNVIVAGGTGAGKTTLLRCLLNEVAPTERIITVEDSLEIGLEHFATLHPNRVDLEAREANLEGVGEFPMHRLVRSGLRMQPDRVIVGEVRGAEALPMMLAMSQGNDGSMCTIHADSSLGVFTRLQMYMAMTPERFDVEVTNLMIANAVHFVLHLGRLDSNERV 855
            +DDP   DIH +G   VWL  +DG+ VAG PVA TD ELI++I T ARR GRSE+RWD A PELD++LP+GDRLHA+  VSGRP+++IRRH+FDI RL QL+ LG     +   L A VRAR N+IVAGGTG GKTT LRCL+NE+   ER+IT+EDSLEIGLE F  LHP+   LEAREAN EG G F M  LVRSGLRM PDRVIVGEVRGAE LPM+LAMSQGNDGSMC++HADSS GVF+RL MY AMT ER   EVT+L++ANAV  ++HLG +    +V
Sbjct:  107 LDDPAVRDIHVSGCQRVWLHMRDGTKVAGPPVAATDDELIDIIATAARRLGRSERRWDHAHPELDLQLPNGDRLHALMSVSGRPTITIRRHDFDICRLDQLVDLGVCDPLIASFLGACVRARANLIVAGGTGTGKTTTLRCLINEIPSGERLITIEDSLEIGLERFDALHPDHTTLEAREANTEGAGAFTMAELVRSGLRMDPDRVIVGEVRGAEVLPMLLAMSQGNDGSMCSVHADSSRGVFSRLAMYAAMTRERLAPEVTHLLVANAVDVIVHLGWVGGRRQV 391          
BLAST of mRNA_M-pyrifera_M_contig85732.19986.1 vs. uniprot
Match: A0A6G0A9R6_9ACTN (CpaF family protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A6G0A9R6_9ACTN)

HSP 1 Score: 362 bits (929), Expect = 7.660e-121
Identity = 182/285 (63.86%), Postives = 218/285 (76.49%), Query Frame = 1
Query:    4 IDDPQWTDIHANGFDEVWLTAQDGSVVAGEPVADTDTELIELIQTQARR-GRSEQRWDPASPELDMRLPSGDRLHAIAWVSGRPSVSIRRHNFDISRLKQLIGLGTISESLFHLLQAMVRARFNVIVAGGTGAGKTTLLRCLLNEVAPTERIITVEDSLEIGLEHFATLHPNRVDLEAREANLEGVGEFPMHRLVRSGLRMQPDRVIVGEVRGAEALPMMLAMSQGNDGSMCTIHADSSLGVFTRLQMYMAMTPERFDVEVTNLMIANAVHFVLHLGRLDSNERV 855
            +DDPQ  DIH +G   VWL  +DG+ + G  VAD+D +L+ELI T ARR GRSE+RWD A PEL+++LP+GDRLHA+  VSGRP+V+IRRH+FDI R+ QL+ LG   + L + L A VRA+ N+IVAGGTG GKTT LRCL+NE+   ER+ITVEDSLEIGLE F  LHP+   LEARE N EGVG F +  LVRS LRM P RVIVGEVRGAE LPM+LAMSQGNDGSMC+IHADSS GVF RL MY AMTPER   +VTNL++ANAV  ++HLG +    RV
Sbjct:  105 LDDPQVRDIHISGAQRVWLNLRDGTKIRGPAVADSDDDLVELIATAARRLGRSERRWDHAHPELNLQLPNGDRLHALMAVSGRPTVTIRRHDFDIHRVAQLVDLGVCDDLLANFLSAAVRAQANIIVAGGTGTGKTTTLRCLINEIPAAERLITVEDSLEIGLERFEDLHPDHETLEAREPNTEGVGSFTLAGLVRSALRMDPQRVIVGEVRGAEVLPMLLAMSQGNDGSMCSIHADSSKGVFGRLAMYAAMTPERLIPDVTNLLVANAVDLIVHLGWVSGQRRV 389          
BLAST of mRNA_M-pyrifera_M_contig85732.19986.1 vs. uniprot
Match: A0A8F4FRU5_9ACTN (Flp pilus assembly complex ATPase component TadA n=1 Tax=Aquihabitans sp. G128 TaxID=2849779 RepID=A0A8F4FRU5_9ACTN)

HSP 1 Score: 360 bits (923), Expect = 3.490e-120
Identity = 181/285 (63.51%), Postives = 219/285 (76.84%), Query Frame = 1
Query:    4 IDDPQWTDIHANGFDEVWLTAQDGSVVAGEPVADTDTELIELIQTQARR-GRSEQRWDPASPELDMRLPSGDRLHAIAWVSGRPSVSIRRHNFDISRLKQLIGLGTISESLFHLLQAMVRARFNVIVAGGTGAGKTTLLRCLLNEVAPTERIITVEDSLEIGLEHFATLHPNRVDLEAREANLEGVGEFPMHRLVRSGLRMQPDRVIVGEVRGAEALPMMLAMSQGNDGSMCTIHADSSLGVFTRLQMYMAMTPERFDVEVTNLMIANAVHFVLHLGRLDSNERV 855
            +DDP+  DIH +G   VWL+ + G  V G  VAD+D EL+ L+ T ARR GRSE+RWD A PEL+++LP+GDRLHA+  VSGRP+V+IRRH+FD+SRL +L+  G     L   L A VRAR N+IVAGGTG GKTTLLRCL+NE+ P ER+ITVEDSLEIGL+HF  LHP+   LEAREAN EGVG F +  LVR+ LRM P+RVIVGEVRGAE LPM+LAMSQGNDGSMC++HADSS GVF RL MY AMT ER + EVTNL++ANAV  V+HL  +D   R+
Sbjct:   87 LDDPEIRDIHISGAHRVWLSYRHGGKVRGPSVADSDAELVALVATAARRLGRSERRWDNAHPELNLQLPNGDRLHALMAVSGRPTVTIRRHDFDLSRLDELVDRGVSDALLAGFLAAAVRARLNLIVAGGTGTGKTTLLRCLINEIPPEERLITVEDSLEIGLDHFEELHPDHEMLEAREANTEGVGAFTLADLVRAALRMDPERVIVGEVRGAEVLPMLLAMSQGNDGSMCSVHADSSKGVFARLAMYAAMTRERLEPEVTNLLVANAVDLVVHLSWVDGVRRI 371          
BLAST of mRNA_M-pyrifera_M_contig85732.19986.1 vs. uniprot
Match: UPI001C6316C3 (Flp pilus assembly complex ATPase component TadA n=1 Tax=Iamia sp. SCSIO 61187 TaxID=2722752 RepID=UPI001C6316C3)

HSP 1 Score: 357 bits (917), Expect = 5.520e-119
Identity = 180/285 (63.16%), Postives = 218/285 (76.49%), Query Frame = 1
Query:    4 IDDPQWTDIHANGFDEVWLTAQDGSVVAGEPVADTDTELIELIQTQARR-GRSEQRWDPASPELDMRLPSGDRLHAIAWVSGRPSVSIRRHNFDISRLKQLIGLGTISESLFHLLQAMVRARFNVIVAGGTGAGKTTLLRCLLNEVAPTERIITVEDSLEIGLEHFATLHPNRVDLEAREANLEGVGEFPMHRLVRSGLRMQPDRVIVGEVRGAEALPMMLAMSQGNDGSMCTIHADSSLGVFTRLQMYMAMTPERFDVEVTNLMIANAVHFVLHLGRLDSNERV 855
            +DDP   DIH +G D VWLT +DG+   G  VA +D EL++LI T ARR GRSE+RWD A PEL+++LP+GDRLHA+  VSGRP+V++RRH+FDI R+ QL+  G   + L   L A V+AR N+IVAGGTG GKTT+LRCL+NE+   ER+ITVEDSLEIGLE F  LHP+   LEAREAN EGVG F +  LVRS LRM P RVIVGEVRGAE LPM+LAMSQGNDGSMC+IHADSS GVF RL MY AM PER   EVTNL++ANAV  ++HLG ++ + R+
Sbjct:  108 LDDPSIRDIHISGSDRVWLTLRDGTKERGPAVAASDDELVDLIATAARRLGRSERRWDHAQPELNLQLPNGDRLHALMAVSGRPTVTVRRHDFDIHRVDQLVDRGVCDDLLAGFLAAAVKARANLIVAGGTGTGKTTMLRCLINEIDSEERLITVEDSLEIGLERFEDLHPDHETLEAREANTEGVGAFTLADLVRSALRMDPHRVIVGEVRGAEVLPMLLAMSQGNDGSMCSIHADSSKGVFGRLAMYAAMAPERLTPEVTNLLVANAVDLIVHLGWVEGDRRI 392          
BLAST of mRNA_M-pyrifera_M_contig85732.19986.1 vs. uniprot
Match: A0A349BBG0_9ACTN (Type II secretion system protein E n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A349BBG0_9ACTN)

HSP 1 Score: 350 bits (897), Expect = 6.230e-116
Identity = 176/285 (61.75%), Postives = 216/285 (75.79%), Query Frame = 1
Query:    4 IDDPQWTDIHANGFDEVWLTAQDGSVVAGEPVADTDTELIELIQTQARR-GRSEQRWDPASPELDMRLPSGDRLHAIAWVSGRPSVSIRRHNFDISRLKQLIGLGTISESLFHLLQAMVRARFNVIVAGGTGAGKTTLLRCLLNEVAPTERIITVEDSLEIGLEHFATLHPNRVDLEAREANLEGVGEFPMHRLVRSGLRMQPDRVIVGEVRGAEALPMMLAMSQGNDGSMCTIHADSSLGVFTRLQMYMAMTPERFDVEVTNLMIANAVHFVLHLGRLDSNERV 855
            +DDP   DIH  G +  WL  +DG  V G  VA++D ELI+LI T ARR GRSE+RWD + PEL++RLP+GDRLHA+  V+GRP+V+IRRH+F I R+ QL+ LG +  +L   + A VRAR NVIVAGGTG GKTT LRCL+NE+   ER+IT+EDSLE+G+EHF  LHP+   +EARE N EGVG F +   VR+GLRM PDRVIVGE RGAE L M+LAMSQGNDGSMC+IHADSS GVF+RL MY AMT ER D EVTNL++ANAV+ ++HLG +    RV
Sbjct:  110 LDDPNVRDIHIAGHNRTWLLLRDGRKVQGPAVAESDAELIDLIATAARRIGRSERRWDHSHPELNLRLPNGDRLHALMAVTGRPTVTIRRHDFAIHRVGQLVDLGVMDVALGEFIAASVRARLNVIVAGGTGTGKTTTLRCLINEIPADERLITIEDSLELGIEHFDDLHPDHETIEAREPNTEGVGAFTLADGVRAGLRMDPDRVIVGECRGAEVLSMLLAMSQGNDGSMCSIHADSSKGVFSRLAMYAAMTRERLDPEVTNLLVANAVNLIVHLGWVGGVRRV 394          
BLAST of mRNA_M-pyrifera_M_contig85732.19986.1 vs. uniprot
Match: UPI001BB943D8 (CpaF family protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=UPI001BB943D8)

HSP 1 Score: 314 bits (805), Expect = 4.910e-102
Identity = 158/279 (56.63%), Postives = 203/279 (72.76%), Query Frame = 1
Query:    1 YIDDPQWTDIHANGFDEVWLTAQDGSVVAGEPVADTDTELIELIQTQARR-GRSEQRWDPASPELDMRLPSGDRLHAIAWVSGRPSVSIRRHNFDISRLKQLIGLGTISESLFHLLQAMVRARFNVIVAGGTGAGKTTLLRCLLNEVAPTERIITVEDSLEIGLEHFATLHPNRVDLEAREANLEGVGEFPMHRLVRSGLRMQPDRVIVGEVRGAEALPMMLAMSQGNDGSMCTIHADSSLGVFTRLQMYMAMTPERFDVEVTNLMIANAVHFVLHLGR 834
            Y+DD + TDIH  G D VWL   DGS   GE +AD+D ELIEL++T A R GR+E+R+D + PEL++RLP G RL AI  VS RPS++IR+H FD++ L  L   GT+ + L   L+A VRAR ++++ GG G GKTTL+R L+NE+ P ER++T+ED+LE+ ++ F  LHPN V LEARE N+EG G   + +LVR GLRM PDRV VGEVRG+E LPM+LAMSQG DGSMCTIHA+S+ GVF RLQMY  + P R     T ++IANAV FV+HL R
Sbjct:  102 YLDDERVTDIHVQGCDVVWLKHTDGSRHRGESIADSDRELIELLRTAAARAGRTERRFDSSQPELNLRLPDGSRLFAIMDVSARPSLTIRKHQFDLAYLGDLRARGTVDQPLEGFLRAAVRARRSIVIGGGIGCGKTTLMRTLINEIPPDERLVTIEDALELDVDRFDQLHPNVVTLEAREPNMEGHGGISLEQLVRMGLRMDPDRVFVGEVRGSEVLPMLLAMSQGQDGSMCTIHANSARGVFRRLQMYAMLPPHRLTPTDTAMLIANAVDFVVHLDR 380          
BLAST of mRNA_M-pyrifera_M_contig85732.19986.1 vs. uniprot
Match: A0A6L6CRJ3_9ACTN (CpaF family protein n=2 Tax=root TaxID=1 RepID=A0A6L6CRJ3_9ACTN)

HSP 1 Score: 299 bits (766), Expect = 1.880e-96
Identity = 151/285 (52.98%), Postives = 196/285 (68.77%), Query Frame = 1
Query:    4 IDDPQWTDIHANGFDEVWLTAQDGSVVAGEPVADTDTELIELIQTQARR-GRSEQRWDPASPELDMRLPSGDRLHAIAWVSGRPSVSIRRHNFDISRLKQLIGLGTISESLFHLLQAMVRARFNVIVAGGTGAGKTTLLRCLLNEVAPTERIITVEDSLEIGLEHFATLHPNRVDLEAREANLEGVGEFPMHRLVRSGLRMQPDRVIVGEVRGAEALPMMLAMSQGNDGSMCTIHADSSLGVFTRLQMYMAMTPERFDVEVTNLMIANAVHFVLHLGRLDSNERV 855
            +DDP  +DIH  G   VW+  ++G     +PV DTD +LIELI+  A R GRSE+R+D  +PEL+++LP G RL A   VS RPS+ IRRH F+I+ LK L   G   E L     A VRAR N+I+AGGTG+GKTTLLR L+NEV P ERI+T+ED+ E+G+E F   HP+   L++R AN+EG GE  +  L R  LRM PDRVIVGEVRGAEA PM++AMSQGN+GSMCT+HADS+  VF +L  YM+M      +E  NL+IA+AVHFV+++       R+
Sbjct:   91 LDDPDISDIHVRGCAPVWVKLRNGQREMRDPVVDTDEQLIELIRRAATRMGRSERRFDAGTPELNLQLPDGSRLFAAMEVSARPSLVIRRHRFEIASLKDLRLRGLFDEQLEQFFSAAVRARRNIIIAGGTGSGKTTLLRALINEVGPNERIVTIEDAYELGIERFEEQHPDHDALQSRPANIEGRGEITLADLTRMALRMDPDRVIVGEVRGAEAFPMLMAMSQGNNGSMCTMHADSTRSVFPKLAAYMSMASTGLPIETVNLLIASAVHFVVYIDNSSGTRRI 375          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig85732.19986.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7Y2DB71_9ACTN1.860e-15074.83CpaF family protein n=1 Tax=Acidimicrobiales bacte... [more]
A0A349B249_9ACTN4.590e-12363.07Type II secretion system protein E (Fragment) n=1 ... [more]
A0A3M2GVV1_ACTSX1.170e-12265.61CpaF family protein n=1 Tax=Actinomyces sp. TaxID=... [more]
UPI001C62B0A12.030e-12164.56Flp pilus assembly complex ATPase component TadA n... [more]
A0A6G0A9R6_9ACTN7.660e-12163.86CpaF family protein n=1 Tax=Actinomycetia bacteriu... [more]
A0A8F4FRU5_9ACTN3.490e-12063.51Flp pilus assembly complex ATPase component TadA n... [more]
UPI001C6316C35.520e-11963.16Flp pilus assembly complex ATPase component TadA n... [more]
A0A349BBG0_9ACTN6.230e-11661.75Type II secretion system protein E n=1 Tax=Acidimi... [more]
UPI001BB943D84.910e-10256.63CpaF family protein n=1 Tax=Actinomycetia bacteriu... [more]
A0A6L6CRJ3_9ACTN1.880e-9652.98CpaF family protein n=2 Tax=root TaxID=1 RepID=A0A... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig85732contigM-pyrifera_M_contig85732:1..858 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score288.5
Seed ortholog evalue3.4e-75
Seed eggNOG ortholog1463887.KL590000_gene5709
KEGG koko:K02283
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Type ii secretion system protein e
EggNOG OGs2GKKJ@201174,COG4962@1,COG4962@2
COG Functional cat.U
Best tax levelActinobacteria
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02035,ko02044
Exons1
Model size858
Cds size858
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816767.34947-CDS-M-pyrifera_M_contig85732:0..8581622816767.34947-CDS-M-pyrifera_M_contig85732:0..858Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig85732 1..858 -
1692278166.4259715-CDS-M-pyrifera_M_contig85732:0..8581692278166.4259715-CDS-M-pyrifera_M_contig85732:0..858Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig85732 1..858 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig85732.19986.1prot_M-pyrifera_M_contig85732.19986.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig85732 1..858 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig85732.19986.1

>prot_M-pyrifera_M_contig85732.19986.1 ID=prot_M-pyrifera_M_contig85732.19986.1|Name=mRNA_M-pyrifera_M_contig85732.19986.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=286bp
YIDDPQWTDIHANGFDEVWLTAQDGSVVAGEPVADTDTELIELIQTQARR
GRSEQRWDPASPELDMRLPSGDRLHAIAWVSGRPSVSIRRHNFDISRLKQ
LIGLGTISESLFHLLQAMVRARFNVIVAGGTGAGKTTLLRCLLNEVAPTE
RIITVEDSLEIGLEHFATLHPNRVDLEAREANLEGVGEFPMHRLVRSGLR
MQPDRVIVGEVRGAEALPMMLAMSQGNDGSMCTIHADSSLGVFTRLQMYM
AMTPERFDVEVTNLMIANAVHFVLHLGRLDSNERVV
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mRNA from alignment at M-pyrifera_M_contig85732:1..858-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig85732.19986.1 ID=mRNA_M-pyrifera_M_contig85732.19986.1|Name=mRNA_M-pyrifera_M_contig85732.19986.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=858bp|location=Sequence derived from alignment at M-pyrifera_M_contig85732:1..858- (Macrocystis pyrifera P11B4 male)
TACATCGACGACCCGCAGTGGACCGACATCCATGCCAACGGCTTCGACGA GGTCTGGCTCACCGCTCAGGACGGCTCGGTTGTCGCCGGCGAACCGGTCG CCGATACCGACACCGAGCTGATCGAACTCATCCAAACCCAAGCCCGCAGG GGTCGTTCCGAGCAGCGCTGGGACCCTGCCTCGCCGGAACTCGACATGCG GCTCCCCTCGGGTGACCGCCTCCACGCCATCGCCTGGGTCTCGGGTCGGC CGTCGGTCTCGATCCGACGCCACAACTTCGATATCAGTCGCCTCAAGCAG CTGATAGGCCTGGGCACGATCTCCGAGTCGCTGTTCCACCTGTTGCAGGC GATGGTGCGGGCCCGCTTCAACGTGATCGTCGCCGGCGGCACCGGCGCCG GCAAGACGACCCTGTTGCGCTGCCTCCTCAACGAGGTTGCGCCGACCGAG AGAATCATCACCGTCGAGGACTCCCTCGAGATCGGTCTCGAGCACTTCGC CACCCTGCACCCGAACCGCGTCGACCTCGAGGCACGCGAAGCCAACCTCG AAGGCGTCGGCGAGTTTCCCATGCACCGCCTCGTGCGATCCGGTCTACGA ATGCAGCCCGACCGGGTGATCGTCGGCGAGGTCCGCGGCGCCGAGGCCCT TCCGATGATGCTGGCCATGTCGCAGGGCAACGACGGCTCGATGTGCACCA TCCACGCGGACTCCAGCCTCGGCGTGTTCACCCGACTCCAGATGTACATG GCAATGACGCCCGAGCGATTCGACGTCGAGGTCACCAACCTGATGATCGC CAACGCCGTGCATTTCGTGCTCCACCTCGGTCGCCTCGACAGCAACGAAC GCGTGGTC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig85732:1..858-

>mRNA_M-pyrifera_M_contig85732.19986.1 ID=mRNA_M-pyrifera_M_contig85732.19986.1|Name=mRNA_M-pyrifera_M_contig85732.19986.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1716bp|location=Sequence derived from alignment at M-pyrifera_M_contig85732:1..858- (Macrocystis pyrifera P11B4 male)
TACATCGACGACCCGCAGTGGACCGACATCCATGCCAACGGCTTCGACGA
GGTCTGGCTCACCGCTCAGGACGGCTCGGTTGTCGCCGGCGAACCGGTCG
CCGATACCGACACCGAGCTGATCGAACTCATCCAAACCCAAGCCCGCAGG
GGTCGTTCCGAGCAGCGCTGGGACCCTGCCTCGCCGGAACTCGACATGCG
GCTCCCCTCGGGTGACCGCCTCCACGCCATCGCCTGGGTCTCGGGTCGGC
CGTCGGTCTCGATCCGACGCCACAACTTCGATATCAGTCGCCTCAAGCAG
CTGATAGGCCTGGGCACGATCTCCGAGTCGCTGTTCCACCTGTTGCAGGC
GATGGTGCGGGCCCGCTTCAACGTGATCGTCGCCGGCGGCACCGGCGCCG
GCAAGACGACCCTGTTGCGCTGCCTCCTCAACGAGGTTGCGCCGACCGAG
AGAATCATCACCGTCGAGGACTCCCTCGAGATCGGTCTCGAGCACTTCGC
CACCCTGCACCCGAACCGCGTCGACCTCGAGGCACGCGAAGCCAACCTCG
AAGGCGTCGGCGAGTTTCCCATGCACCGCCTCGTGCGATCCGGTCTACGA
ATGCAGCCCGACCGGGTGATCGTCGGCGAGGTCCGCGGCGCCGAGGCCCT
TCCGATGATGCTGGCCATGTCGCAGGGCAACGACGGCTCGATGTGCACCA
TCCACGCGGACTCCAGCCTCGGCGTGTTCACCCGACTCCAGATGTACATG
GCAATGACGCCCGAGCGATTCGACGTCGAGGTCACCAACCTGATGATCGC
CAACGCCGTGCATTTCGTGCTCCACCTCGGTCGCCTCGACAGCAACGAAC
GCGTGGTCTACATCGACGACCCGCAGTGGACCGACATCCATGCCAACGGC
TTCGACGAGGTCTGGCTCACCGCTCAGGACGGCTCGGTTGTCGCCGGCGA
ACCGGTCGCCGATACCGACACCGAGCTGATCGAACTCATCCAAACCCAAG
CCCGCAGGGGTCGTTCCGAGCAGCGCTGGGACCCTGCCTCGCCGGAACTC
GACATGCGGCTCCCCTCGGGTGACCGCCTCCACGCCATCGCCTGGGTCTC
GGGTCGGCCGTCGGTCTCGATCCGACGCCACAACTTCGATATCAGTCGCC
TCAAGCAGCTGATAGGCCTGGGCACGATCTCCGAGTCGCTGTTCCACCTG
TTGCAGGCGATGGTGCGGGCCCGCTTCAACGTGATCGTCGCCGGCGGCAC
CGGCGCCGGCAAGACGACCCTGTTGCGCTGCCTCCTCAACGAGGTTGCGC
CGACCGAGAGAATCATCACCGTCGAGGACTCCCTCGAGATCGGTCTCGAG
CACTTCGCCACCCTGCACCCGAACCGCGTCGACCTCGAGGCACGCGAAGC
CAACCTCGAAGGCGTCGGCGAGTTTCCCATGCACCGCCTCGTGCGATCCG
GTCTACGAATGCAGCCCGACCGGGTGATCGTCGGCGAGGTCCGCGGCGCC
GAGGCCCTTCCGATGATGCTGGCCATGTCGCAGGGCAACGACGGCTCGAT
GTGCACCATCCACGCGGACTCCAGCCTCGGCGTGTTCACCCGACTCCAGA
TGTACATGGCAATGACGCCCGAGCGATTCGACGTCGAGGTCACCAACCTG
ATGATCGCCAACGCCGTGCATTTCGTGCTCCACCTCGGTCGCCTCGACAG
CAACGAACGCGTGGTC
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