prot_M-pyrifera_M_contig85108.19839.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig85108.19839.1
Unique Nameprot_M-pyrifera_M_contig85108.19839.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length207
Homology
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BLAST of mRNA_M-pyrifera_M_contig85108.19839.1 vs. uniprot
Match: A0A7S3PPM4_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PPM4_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 8.050e-13
Identity = 59/211 (27.96%), Postives = 93/211 (44.08%), Query Frame = 0 
Query:    1 MRGLQLFCARLVKIPFLRADGAVWTFL-TDDGERWEAARKL--TPKDFQDGGVYGNDPCAPSVEMAPLPLEGAVRWRAAVQAYPLPHNSDLILSEAQRQVAELDDALTALMHSGRRLVERSLALAEEARAFHGAFQALARVEEACASGT---WHPKSTPDLAMTESMGAKGVAAWSHTLRHQPRALEALCLEYIRYEQAQCRAVKQLMETR 205
            MRGL +F ARL++ P+L+ D A+  FL  +D ++WE  +K   TP   +                     EG  RW  A+  Y LP  +D ++++   Q+  L+  + AL+HS   LV  + A A     F   +Q + + E +    T   +  KS   L             WS     +PR +E L  E +RYE      +K+L++ R
Sbjct:  145 MRGLNMFMARLLENPYLKTDSAILLFLKANDLDQWEQGKKEEETPNTSKRN-------------------EGQYRWMQALTNYTLPKQADRLVADISSQIESLECVMRALLHSCSSLVANAYAYAASLADFKMRYQEVVKAEASSTDTTQVEYANKSDSQLLKVLQTMGDTFTRWSDIQTGEPRIIERLLQEILRYEHGCILKLKELLKLR 336
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig85108.19839.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7S3PPM4_9STRA8.050e-1327.96Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 90..110
IPR027267AH/BAR domain superfamilyGENE3D1.20.1270.60coord: 84..207
e-value: 4.6E-6
score: 28.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig85108contigM-pyrifera_M_contig85108:19..639 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig85108.19839.1mRNA_M-pyrifera_M_contig85108.19839.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig85108 4..639 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig85108.19839.1 ID=prot_M-pyrifera_M_contig85108.19839.1|Name=mRNA_M-pyrifera_M_contig85108.19839.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=207bp
MRGLQLFCARLVKIPFLRADGAVWTFLTDDGERWEAARKLTPKDFQDGGV
YGNDPCAPSVEMAPLPLEGAVRWRAAVQAYPLPHNSDLILSEAQRQVAEL
DDALTALMHSGRRLVERSLALAEEARAFHGAFQALARVEEACASGTWHPK
STPDLAMTESMGAKGVAAWSHTLRHQPRALEALCLEYIRYEQAQCRAVKQ
LMETREQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027267AH/BAR_dom_sf