mRNA_M-pyrifera_M_contig8500.19811.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig8500.19811.1 vs. uniprot
Match: D7FVD1_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVD1_ECTSI) HSP 1 Score: 373 bits (958), Expect = 1.890e-115 Identity = 188/244 (77.05%), Postives = 218/244 (89.34%), Query Frame = 1 Query: 1 QVKSWMAGVVARSQRLSNIFGSNWTFGQMSTIMRCKMSMVHEFELGMTSMVDLKHKVARALIKPQKCLQKDNVQAIHDRAVAMGDDDPLKPDYSRFLRSGKKTAFSNAIPLQHGHLENYSHWRDVIGAKAVIKIQNIFRGKLARKSAESIAKKHAFFCARAVALHDTRQRIAADIWKREAASGVGRLKWDAKVRMKQAKLRAAGGKNMDRQEVVEAIIAASVEAAQEGVMQRFDEIAKERGFHE 732 QVK+WMAG++ARS +LS+IFGS+W+FGQMST+MRCKMSMVHEFEL M SMVDLKHKVAR LIK + CLQK+NVQ +HDRA+AMGDDDPLKPDYSRFL S KK +FSNA+ L HGHLEN SHWRD + KAV KIQN+FRGK AR++AE +AKK AF CARA+A+ DTRQRIAA+IWKREAASGVGRLKWDAKVRMKQAKLRAAG +N+DRQ+VVEAII SV+AAQ+GVM+RFDEIA++RGF E Sbjct: 397 QVKTWMAGIIARSPKLSDIFGSSWSFGQMSTVMRCKMSMVHEFELSMISMVDLKHKVARKLIKHRPCLQKENVQVMHDRALAMGDDDPLKPDYSRFLHSDKKKSFSNAVSLSHGHLENLSHWRDTVRIKAVTKIQNLFRGKQARQAAERMAKKQAFLCARAMAVEDTRQRIAAEIWKREAASGVGRLKWDAKVRMKQAKLRAAG-ENVDRQQVVEAIIEESVQAAQDGVMERFDEIARDRGFDE 639
BLAST of mRNA_M-pyrifera_M_contig8500.19811.1 vs. uniprot
Match: A0A6H5K633_9PHAE (Clu domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K633_9PHAE) HSP 1 Score: 305 bits (782), Expect = 8.430e-92 Identity = 145/193 (75.13%), Postives = 172/193 (89.12%), Query Frame = 1 Query: 1 QVKSWMAGVVARSQRLSNIFGSNWTFGQMSTIMRCKMSMVHEFELGMTSMVDLKHKVARALIKPQKCLQKDNVQAIHDRAVAMGDDDPLKPDYSRFLRSGKKTAFSNAIPLQHGHLENYSHWRDVIGAKAVIKIQNIFRGKLARKSAESIAKKHAFFCARAVALHDTRQRIAADIWKREAASGVGRLKWDAKV 579 +VK+WMAG++ARS +LS+IFGS+W+FGQMST+MRC MSMVHEFEL M SM+DLKHKVAR LIK + CLQK+NVQ +HDRA+AMGDDDPLKPDYSRFL S +K +FSNA+ L+HGHLEN SHWRD + KAV KIQN+FRGKLAR++AE++AKK AF CARA+A+ DTRQRIAA+IWKREAASGVGRLKWDAK Sbjct: 181 KVKAWMAGIIARSPKLSDIFGSSWSFGQMSTVMRCSMSMVHEFELSMISMIDLKHKVARKLIKHRPCLQKENVQVVHDRALAMGDDDPLKPDYSRFLHSDQKRSFSNAVSLRHGHLENLSHWRDTVRIKAVTKIQNLFRGKLARQAAETMAKKQAFLCARAMAVEDTRQRIAAEIWKREAASGVGRLKWDAKA 373
BLAST of mRNA_M-pyrifera_M_contig8500.19811.1 vs. uniprot
Match: A0A2R5GJD7_9STRA (F-box/LRR-repeat protein 2 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GJD7_9STRA) HSP 1 Score: 167 bits (424), Expect = 9.380e-44 Identity = 97/248 (39.11%), Postives = 148/248 (59.68%), Query Frame = 1 Query: 1 QVKSWMAGVVARSQRLSNIFGSNWTFGQMSTIMRCKMSMVHEFELGMTSMVDLKHKVARALIKPQKCLQKDNVQAIHDRAVAMGDDDPLKPDYSRFLRSGKKTAFSNAIPLQHGHLENYSHWRDVIGAKAVIKIQNIFRGKLARKSAESIAKKHAFFCARAVALHDTRQRIAADIWKREA--ASGVGRLKWDAKVRMKQAKLRAAGGKNMDRQEVVEAIIAASVEAAQEGVMQRFDEIAKERGFHEGD 738 Q S M+ ++ S+ LS +F W + +S R +MS + ++ELGM S+ DL ++AR + + L + Q +H+RA+AMG +DPLKPDY++F+ K SN +PL+HG L N +++ + A + +Q +R KL R+ AE K+ AFF A VAL ++R ++ + KREA A+ VGR+KWDA VRM+Q KLRA G + R+EVV + V+ AQ V + F+++ ERG D Sbjct: 606 QFSSCMSHLICISEDLSKVFNVPWAYANLSEWQRTRMSYIKKYELGMLSLRDLNKRIARLWVTYRPLLALEQKQTMHERALAMGRNDPLKPDYAKFMTRRKHKLQSNVVPLEHGGLGNILYYQSRVTYNAAMMVQAAWRSKLGRRRAEREVKRRAFFAAWRVALEESRAKVEREFAKREAQAANTVGRMKWDATVRMRQGKLRALG-QAFSREEVVALLTEEEVKVAQTSVDEEFEKMKLERGIKNDD 852
BLAST of mRNA_M-pyrifera_M_contig8500.19811.1 vs. uniprot
Match: A0A835YMZ6_9STRA (Clu domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMZ6_9STRA) HSP 1 Score: 166 bits (420), Expect = 3.190e-43 Identity = 92/245 (37.55%), Postives = 142/245 (57.96%), Query Frame = 1 Query: 1 QVKSWMAGVVARSQRLSNIFGSNWTFGQMSTIMRCKMSMVHEFELGMTSMVDLKHKVARALIKPQKCLQKDNVQAIHDRAVAMGDDDPLKPDYSRFLRSGKKTAFSNAIPLQHGHLENYSHWRDVIGAKAVIKIQNIFRGKLARKSAESIAKKHAFFCARAVALHDTRQRIAADIWKREA-ASGVGRLKWDAKVRMKQAKLRAAG--GKNMDRQEVVEAIIAASVEAAQEGVMQRFDEIAKERGF 726 + K W+A +V R +RLS FG+ W + S +MR + + + ELG+ ++ DLK+++AR + + L + A+H+RA+A GD DPLKPDYSRFL + ++ S A+PL HGHL + HWR + K+QN++RG+ A + D +REA A+GV R++WDAKVR++QAK+RA+G G + R + + ++ + AA+ V +RFDEIA+ERG Sbjct: 489 EAKRWLAALVRRDRRLSEAFGAPWGAAEASALMRARTAPARQLELGLITLADLKYRLARDGARHRPQLDPERRLAVHERALARGDGDPLKPDYSRFLAAARRACSSAAVPLAHGHLGSLPHWRARAAQRGATKLQNLWRGRRAXXXXXXXXXXXXXXXXXXXXXXXXXXXMELDFRRREAEAAGVARMRWDAKVRVRQAKMRASGSAGDGVTRADALREMLEETAAAAEADVRRRFDEIARERGI 733
BLAST of mRNA_M-pyrifera_M_contig8500.19811.1 vs. uniprot
Match: A0A662XGU1_9STRA (Clu domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XGU1_9STRA) HSP 1 Score: 153 bits (387), Expect = 8.360e-39 Identity = 87/236 (36.86%), Postives = 145/236 (61.44%), Query Frame = 1 Query: 25 VVARSQRLSNIFGSNWTFGQMSTIMRCKMSMVHEFELGMTSMVDLKHKVARALIKPQKCLQKDNVQAIHDRAVAMGDDDPLKPDYSRFLRSGKKTAFSNAIPLQHGHLENYSHWRDVIGAKAVIKIQNIFRGKLARKSAESIAKKHAFFCARAVALHDTRQRIAADIWKREA--ASGVGRLKWDAKVRMKQAKLRAAGGKNMDRQEVVEAIIAASVEAAQEGVMQRFDEIAKERGF 726 +V RS+ L + G W + +S + M+ +H++ LG+ ++ DLK+ VAR +++P++ L + IH+RA+AMG++DPLK DYS++L + SN +PL HG N H+R + K+ +K+Q +R K R+ A A+K AF+ AR +AL + RQ+I + +R+A A V ++K++AK+RMKQ KLR G R++V+ + +V+ AQ+ V RF E+ +E G+ Sbjct: 800 LVERSKYLCELLGHPWKYELLSRFVIQHMNAIHQYRLGLININDLKYTVARQMVQPREELTRWKKNEIHERALAMGENDPLKTDYSKYLPKRRTKLLSNVVPLDHGGYRNLLHYRMEVILKSAVKLQTSWRAKKGRRVARLAAEKQAFYHARGLALEEARQKIEKEWGERDAKPAHSVDKMKFEAKIRMKQVKLRTKGNA-FTREQVLALMTEEAVQVAQKEVENRFREMEEELGY 1034
BLAST of mRNA_M-pyrifera_M_contig8500.19811.1 vs. uniprot
Match: W2NLG0_PHYPR (Clu domain-containing protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2NLG0_PHYPR) HSP 1 Score: 150 bits (378), Expect = 1.330e-37 Identity = 86/235 (36.60%), Postives = 143/235 (60.85%), Query Frame = 1 Query: 28 VARSQRLSNIFGSNWTFGQMSTIMRCKMSMVHEFELGMTSMVDLKHKVARALIKPQKCLQKDNVQAIHDRAVAMGDDDPLKPDYSRFLRSGKKTAFSNAIPLQHGHLENYSHWRDVIGAKAVIKIQNIFRGKLARKSAESIAKKHAFFCARAVALHDTRQRIAADIWKREA--ASGVGRLKWDAKVRMKQAKLRAAGGKNMDRQEVVEAIIAASVEAAQEGVMQRFDEIAKERGF 726 + S+ L + G +W + Q+S + MS + ++ LG+ ++ DLK+ VAR + +P++ L IH+RA+AMG++DPLK DYS++L + SN +PL HG N H+R + ++ +K+Q +R K R+ A A+K AF+ AR +AL ++RQ+I + R+A A V ++K +AK+RMKQ KLR G N R++++ ++ SV+ AQ+ V RF E+ +E G+ Sbjct: 784 IESSKYLCGLLGLSWKYQQLSRFVIQHMSPIQQYRLGLINVNDLKYTVARQMTQPREELSCWKKAIIHERALAMGENDPLKTDYSKYLPKRRSKLLSNVVPLDHGGYRNLLHYRMEVILRSAVKLQATWRAKKGRQVARLAAEKQAFYHARGLALEESRQKIEKEWSDRDAKPAHSVDKMKLEAKIRMKQVKLRTKGN-NFSREQILALMVEESVQIAQKEVENRFREMEEELGY 1017
BLAST of mRNA_M-pyrifera_M_contig8500.19811.1 vs. uniprot
Match: A0A5D6YCH9_9STRA (Clu domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YCH9_9STRA) HSP 1 Score: 148 bits (373), Expect = 6.190e-37 Identity = 87/246 (35.37%), Postives = 140/246 (56.91%), Query Frame = 1 Query: 1 QVKSWMAGVVARSQRLSNIFGSNWTFGQMSTIMRCKMSMVHEFELGMTSMVDLKHKVARALIKPQKCLQKDNVQAIHDRAVAMGDDDPLKPDYSRFLRSGKKTAFSNAIPLQHGHLENYSHWRDVIGAKAVIKIQNIFRGKLARKSAESIAKKHAFFCARAVALHDTRQRIAADIWKREA--ASGVGRLKWDAKVRMKQAKLRAAGGKNMDRQEVVEAIIAASVEAAQEGVMQRFDEIAKERGFHE 732 + + + V S+ L + G W + +S + MS H+F LG+ ++ DLK VAR +++P+K L + +H+RA+AMG++DPLK DYS++L + SN +PL HG N H R + +A +K+Q +R + R+ A A+K AF+ AR VAL + R + ++ R+A A V ++K++AK+RMKQ KLR G R++V + +V+ AQ V RF E+ +E G+ E Sbjct: 642 EFEKYCVETVETSKYLCELLGHPWKYEHLSRFVVQHMSATHQFRLGLINLNDLKFAVARQMVQPRKELSRWKKNVVHERALAMGENDPLKTDYSKYLPKRRAKLLSNVVPLDHGGYRNLLHHRMEVILRATVKLQTTWRARKGRQVARLAAEKQAFYHARGVALEEARAAVESEWRARDARPAHSVEKMKFEAKIRMKQVKLRTKGNA-FSREQVAALLTEEAVQLAQREVENRFREMEEELGYLE 886
BLAST of mRNA_M-pyrifera_M_contig8500.19811.1 vs. uniprot
Match: A0A329RIW9_9STRA (Clu domain-containing protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329RIW9_9STRA) HSP 1 Score: 146 bits (369), Expect = 2.120e-36 Identity = 86/232 (37.07%), Postives = 139/232 (59.91%), Query Frame = 1 Query: 37 SQRLSNIFGSNWTFGQMSTIMRCKMSMVHEFELGMTSMVDLKHKVARALIKPQKCLQKDNVQAIHDRAVAMGDDDPLKPDYSRFLRSGKKTAFSNAIPLQHGHLENYSHWRDVIGAKAVIKIQNIFRGKLARKSAESIAKKHAFFCARAVALHDTRQRIAADIWKREA--ASGVGRLKWDAKVRMKQAKLRAAGGKNMDRQEVVEAIIAASVEAAQEGVMQRFDEIAKERGF 726 S+ L + G W + Q+S + MS + ++ LG+ ++ DLK+ +AR + +P++ L + IH+RAVAMG++DPLK DYS++L + SN +PL HG N H+R + ++ +K+Q +R K R+ A A+K AF+ AR +AL + RQRI + R+A A V ++K +AK+RMKQ KLR G R++V+ + +V+ AQ+ V RF E+ +E G+ Sbjct: 796 SKYLCELLGLPWKYQQLSRFVIQHMSPIQQYRLGLINVNDLKYTLARQMTQPREELSRWKKAIIHERAVAMGENDPLKTDYSKYLPKRRSKLLSNVVPLDHGGYRNLLHYRMEVIVRSAVKLQATWRAKKGRQVARLAAEKQAFYHARGLALDEARQRIEKEWSDRDAKPAHSVDKMKLEAKIRMKQVKLRTKGN-TFSREQVLALMTEEAVQIAQKEVENRFREMEEELGY 1026
BLAST of mRNA_M-pyrifera_M_contig8500.19811.1 vs. uniprot
Match: A0A6A3JP86_9STRA (Clu domain-containing protein n=7 Tax=Phytophthora TaxID=4783 RepID=A0A6A3JP86_9STRA) HSP 1 Score: 146 bits (369), Expect = 2.120e-36 Identity = 84/244 (34.43%), Postives = 145/244 (59.43%), Query Frame = 1 Query: 1 QVKSWMAGVVARSQRLSNIFGSNWTFGQMSTIMRCKMSMVHEFELGMTSMVDLKHKVARALIKPQKCLQKDNVQAIHDRAVAMGDDDPLKPDYSRFLRSGKKTAFSNAIPLQHGHLENYSHWRDVIGAKAVIKIQNIFRGKLARKSAESIAKKHAFFCARAVALHDTRQRIAADIWKREA--ASGVGRLKWDAKVRMKQAKLRAAGGKNMDRQEVVEAIIAASVEAAQEGVMQRFDEIAKERGF 726 + S+ + S+ L + G W + Q+S + +MS +H++ LG+ ++ DLK+ +AR L +P++ L + IH+RA+AMG++DPLK DYS++L + SN +PL HG N H+R + ++ +++Q +R + R+ A A+K AF+ AR +AL + R + + R+A A V ++K++AK+RMKQ KLR G R++V+ + +V+AAQ+ V RF E+ +E G+ Sbjct: 776 EFNSYCIETIEGSKYLCELLGHPWKYQQLSRFVVQQMSTIHQYRLGLININDLKYALARQLTQPREELSQWKKAIIHERALAMGENDPLKTDYSKYLPRRRAKLLSNVVPLDHGGYRNLLHYRMEVILRSAVRLQTSWRARKGRQIARLAAEKQAFYHARGLALEEARNTVEKEWSDRDAKPAHSVDKMKFEAKIRMKQVKLRTKGNA-FSREQVLALMTEDAVQAAQKDVENRFREMEEELGY 1018
BLAST of mRNA_M-pyrifera_M_contig8500.19811.1 vs. uniprot
Match: G4YXI1_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YXI1_PHYSP) HSP 1 Score: 146 bits (368), Expect = 2.640e-36 Identity = 83/232 (35.78%), Postives = 141/232 (60.78%), Query Frame = 1 Query: 37 SQRLSNIFGSNWTFGQMSTIMRCKMSMVHEFELGMTSMVDLKHKVARALIKPQKCLQKDNVQAIHDRAVAMGDDDPLKPDYSRFLRSGKKTAFSNAIPLQHGHLENYSHWRDVIGAKAVIKIQNIFRGKLARKSAESIAKKHAFFCARAVALHDTRQRIAADIWKREA--ASGVGRLKWDAKVRMKQAKLRAAGGKNMDRQEVVEAIIAASVEAAQEGVMQRFDEIAKERGF 726 S+ L + G W + Q+S + MS +H++ LG+ ++ DLK+ +AR + +P++ L + IH+RA+AMG++DPLK DYS++L + SN +PL HG N H+R + ++ +++Q +R + R+ A A+K AF+ AR +AL + RQ + + R+A A V ++K++AK+RMKQ KLR G R++V+ + +V+AAQ+ V RF E+ +E G+ Sbjct: 711 SKYLCELLGHPWKYQQLSRFVVQHMSAIHQYRLGLININDLKYALARQMTQPREELSQWKKAIIHERALAMGENDPLKTDYSKYLPRRQAKLLSNVVPLDHGGYRNLLHYRMEVILRSAVRLQTTWRARKGRQIARLAAEKQAFYHARGLALEEARQTVEREWSDRDAKPAHSVDKMKFEAKIRMKQVKLRTKGNA-FSREQVLSLMTEEAVQAAQKEVENRFREMEEELGY 941 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8500.19811.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig8500.19811.1 >prot_M-pyrifera_M_contig8500.19811.1 ID=prot_M-pyrifera_M_contig8500.19811.1|Name=mRNA_M-pyrifera_M_contig8500.19811.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=241bp MAGVVARSQRLSNIFGSNWTFGQMSTIMRCKMSMVHEFELGMTSMVDLKHback to top mRNA from alignment at M-pyrifera_M_contig8500:7711..8798+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig8500.19811.1 ID=mRNA_M-pyrifera_M_contig8500.19811.1|Name=mRNA_M-pyrifera_M_contig8500.19811.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1088bp|location=Sequence derived from alignment at M-pyrifera_M_contig8500:7711..8798+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig8500:7711..8798+ >mRNA_M-pyrifera_M_contig8500.19811.1 ID=mRNA_M-pyrifera_M_contig8500.19811.1|Name=mRNA_M-pyrifera_M_contig8500.19811.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1446bp|location=Sequence derived from alignment at M-pyrifera_M_contig8500:7711..8798+ (Macrocystis pyrifera P11B4 male)back to top |