mRNA_M-pyrifera_M_contig84893.19785.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig84893.19785.1 vs. uniprot
Match: L8H6G4_ACACA (Uncharacterized protein (Fragment) n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H6G4_ACACA) HSP 1 Score: 107 bits (268), Expect = 4.510e-24 Identity = 64/160 (40.00%), Postives = 87/160 (54.37%), Query Frame = 1 Query: 19 NAPPTATLPVLL-----HADCGLVVQEMRWGLAA--------KGFSTCNARAETAETKRTFKGLLPGRRCVVLLEGFYEWQRSGP------KRRSFYATSDAPLLALAGLYQAGKGGRHY----CTVLTVAAPPDLLWLHTRMPALLRDEGEVEAWLRPG 429 N P A LPV+ DC + M+WGL + + NARAET + KR++K L+P +RCVV++EG++EW+ S P K+ F+ D LLALAGLY K + T++T AA P+L W H RMP +L DE +E WLR G Sbjct: 19 NLAPGAHLPVVYCTTGNDTDCKREMASMKWGLVPFWSKVGDNRLYKMSNARAETLKVKRSYKDLIPSKRCVVVIEGYFEWECSTPSPGVQAKQPFFFQRPDRKLLALAGLYDCWKDSQGNELLTFTMITTAAAPNLAWCHERMPVIL-DEAGIEIWLRTG 177
BLAST of mRNA_M-pyrifera_M_contig84893.19785.1 vs. uniprot
Match: A0A2V0PQH9_9CHLO (Uncharacterized protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PQH9_9CHLO) HSP 1 Score: 108 bits (269), Expect = 6.820e-24 Identity = 75/193 (38.86%), Postives = 107/193 (55.44%), Query Frame = 1 Query: 73 VVQEMRWGLAA--------KGFSTCNARAETAETKRTFKGLLPGRRCVVLLEGFYEWQR-SGPKRRSFYATSDAPL-----LALAGLYQA-----GKGGRHYCTVLTVAAPPDLLWLHTRMPALLRDEGEVEAWLRPGPAPMRLLRPPAAAMDFLRVVEVSSYVNAVKNRG-ERCRTPLADLSTAKGSLQSFF 591 VV+ M+WGL F NAR+ET +K F LLPGRRCVVLL GFYEW+ +G K++ +Y +P + +AGL+ G+ R + T+LT + P L WLH RMPALLR + +VEAWL P P ++++RP D L V+ ++ +G + CR D+ +KGS+ +FF Sbjct: 139 VVECMKWGLVPFFTREDRPDHFKMFNARSETVASKGVFSRLLPGRRCVVLLNGFYEWKAVAGGKKQPYYVHLKSPSGGEEPMRMAGLWDEWTDPEGQKVRSF-TMLTTDSAPKLSWLHDRMPALLRGDADVEAWLGPEPN-LKVIRPYNG--DDLAWHPVTPAMSKPSYQGPDACR----DVRQSKGSIHAFF 323
BLAST of mRNA_M-pyrifera_M_contig84893.19785.1 vs. uniprot
Match: A0A7I8W2K7_9ANNE (Abasic site processing protein HMCES n=1 Tax=Dimorphilus gyrociliatus TaxID=2664684 RepID=A0A7I8W2K7_9ANNE) HSP 1 Score: 104 bits (260), Expect = 1.840e-23 Identity = 72/197 (36.55%), Postives = 105/197 (53.30%), Query Frame = 1 Query: 73 VVQEMRWGLA----------AKGFSTCNARAETAETKRTFK-GLLPGRRCVVLLEGFYEWQRSGP---KRRSFYATSDAP-----LLALAGLYQA-----GKGGRHYCTVLTVAAPPDLLWLHTRMPALLRDEGEVEAWLRPGPAPMRLLRPPAAAMDFLRVVEVSSYVNAVKNRGERCRTPLADLSTAKGSLQSFF 591 VVQ MRWGL + G++ N R++T E+K F L G+RCVVLL G+YEWQ K++ F+ T+ + LL +AG++ G+ + T++TV A DL WLH RMPA+L+++ EV WL G + L+RP ++ + VSS VN V N+GE C + +L + S S F Sbjct: 82 VVQPMRWGLVPFWHKGESIKSVGYNMINCRSDTMESKNAFSVPLKKGKRCVVLLNGYYEWQEKNDVTGKKQPFFITNKSSEEKQSLLTVAGIFDTWKPKDGEDLVNSYTIITVDAHEDLKWLHNRMPAILKNDKEVYDWLENGE--LSLIRP----INEVNYHPVSSAVNTVSNKGEDCAKEV-ELKKPEESASSKF 271
BLAST of mRNA_M-pyrifera_M_contig84893.19785.1 vs. uniprot
Match: UPI0009BD54F3 (uncharacterized protein LOC18440126 isoform X1 n=2 Tax=Amborella trichopoda TaxID=13333 RepID=UPI0009BD54F3) HSP 1 Score: 105 bits (263), Expect = 2.550e-23 Identity = 73/223 (32.74%), Postives = 109/223 (48.88%), Query Frame = 1 Query: 4 YAGSCNAPPTATLPVLL---HADCGLVVQEMRWGLAAK---------GFSTCNARAETAETKRTFKGLLPGRRCVVLLEGFYEWQRSGPKRRSFYAT-SDAPLLALAGLYQAGKG----GRHYCTVLTVAAPPDLLWLHTRMPALLRDEGEVEAWLRPGPAP-MRLLRPPAAAMDFLRVVEVSSYVNAVKNRGERCRTPLADLSTAKGSLQSFFARSPQKKKP 618 Y S N P A LPVL + G VV M+WGL F NAR+E+ + K +F+ L+P +RC+V++EGFYEW++ G K++ +Y D L AGLY + G + T+LT L WLH RMP +L ++ ++AWL P+P + L P D + V+ + + G C + S K ++ F +S KK+P Sbjct: 51 YRLSYNIAPGAYLPVLRKEQESKHGYVVHCMKWGLVPSFTKKTEKPDHFKMFNARSESIQEKASFRRLVPNKRCLVVVEGFYEWKKDGSKKQPYYLHFRDGRALVFAGLYDTWENSEGEGLYTFTILTTRCSSALDWLHDRMPVILGNKEAIDAWLNITPSPKVDSLLQPYEGSDLVWY-PVTPAMGKIFFAGPECIKEIQLKSENKNTISKLFMQSHNKKQP 272
BLAST of mRNA_M-pyrifera_M_contig84893.19785.1 vs. uniprot
Match: W1PPG9_AMBTC (Uncharacterized protein n=2 Tax=Amborella trichopoda TaxID=13333 RepID=W1PPG9_AMBTC) HSP 1 Score: 105 bits (263), Expect = 3.200e-23 Identity = 73/223 (32.74%), Postives = 109/223 (48.88%), Query Frame = 1 Query: 4 YAGSCNAPPTATLPVLL---HADCGLVVQEMRWGLAAK---------GFSTCNARAETAETKRTFKGLLPGRRCVVLLEGFYEWQRSGPKRRSFYAT-SDAPLLALAGLYQAGKG----GRHYCTVLTVAAPPDLLWLHTRMPALLRDEGEVEAWLRPGPAP-MRLLRPPAAAMDFLRVVEVSSYVNAVKNRGERCRTPLADLSTAKGSLQSFFARSPQKKKP 618 Y S N P A LPVL + G VV M+WGL F NAR+E+ + K +F+ L+P +RC+V++EGFYEW++ G K++ +Y D L AGLY + G + T+LT L WLH RMP +L ++ ++AWL P+P + L P D + V+ + + G C + S K ++ F +S KK+P Sbjct: 72 YRLSYNIAPGAYLPVLRKEQESKHGYVVHCMKWGLVPSFTKKTEKPDHFKMFNARSESIQEKASFRRLVPNKRCLVVVEGFYEWKKDGSKKQPYYLHFRDGRALVFAGLYDTWENSEGEGLYTFTILTTRCSSALDWLHDRMPVILGNKEAIDAWLNITPSPKVDSLLQPYEGSDLVWY-PVTPAMGKIFFAGPECIKEIQLKSENKNTISKLFMQSHNKKQP 293
BLAST of mRNA_M-pyrifera_M_contig84893.19785.1 vs. uniprot
Match: S8ECY8_9LAMI (Uncharacterized protein (Fragment) n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8ECY8_9LAMI) HSP 1 Score: 102 bits (254), Expect = 1.270e-22 Identity = 62/169 (36.69%), Postives = 92/169 (54.44%), Query Frame = 1 Query: 4 YAGSCNAPPTATLPVLLHADC----GLVVQEMRWGL----AAKG-----FSTCNARAETAETKRTFKGLLPGRRCVVLLEGFYEWQRSGPKRRSFYAT-SDAPLLALAGLYQAGKGGRHYC----TVLTVAAPPDLLWLHTRMPALLRDEGEVEAWLRPGPAPMRLLRP 456 Y S N P +LPV+ H D G+ VQ M+WGL A K F NARAE+ + K +F+ L+P +RC+V +EGFYEW++ G K++ +Y SD L LA L+ + K T++T ++ L WLH RMP +L ++ + W G ++LL+P Sbjct: 33 YQPSYNVAPGFSLPVV-HRDGEKENGVAVQCMKWGLIPSFANKNDKIDHFKMFNARAESIQEKASFRRLIPNKRCLVCVEGFYEWKKDGTKKQPYYIHFSDGSPLVLAALFDSWKSSSQDVMFTFTIITTSSSTSLEWLHDRMPVILGNQESIHCWFNDGMPSLQLLKP 200
BLAST of mRNA_M-pyrifera_M_contig84893.19785.1 vs. uniprot
Match: A0A7C7LLN8_9BACT (Abasic site processing protein n=4 Tax=Candidatus Marinimicrobia bacterium TaxID=2026760 RepID=A0A7C7LLN8_9BACT) HSP 1 Score: 100 bits (250), Expect = 1.400e-22 Identity = 66/203 (32.51%), Postives = 106/203 (52.22%), Query Frame = 1 Query: 4 YAGSCNAPPTATLPVLLHADCGLVVQEMRWGLA-------AKGFSTCNARAETAETKRTFKGLLPGRRCVVLLEGFYEWQRSGPKRRSFYATS-DAPLLALAGLYQAGKGGR----HYCTVLTVAAPPDLLWLHTRMPALLRDEGEVEAWLRPG----PAPMRLLRPPAAAMDFLRVVEVSSYVNAVKNRGERCRTPLADLST 564 Y+ S N P+ + P+++ G V+ M+WGL + G NAR+ET K +F+ L+P +RCVV+ +G++EWQ++ K FY D LL +AGL+ K + TV+T P++ ++H RMP +L E + WL+ P M LL+P D L+ VS+ VN+ +N + C PL + ++ Sbjct: 32 YSPSFNIAPSQSSPIMID-HMGRRVKPMKWGLIPNWSKDPSMGSKLINARSETLLEKPSFQNLVPSKRCVVITDGYFEWQKTSSKSIPFYIRHPDNKLLPMAGLWDIWKNASDESIYSYTVITTKPAPEIEYIHHRMPVILNPE-HINPWLQIHNTSIPNAMALLKP---YTDPLKAYPVSTLVNSPRNNRKECILPLEESNS 229
BLAST of mRNA_M-pyrifera_M_contig84893.19785.1 vs. uniprot
Match: K0YQW4_9CORY (Abasic site processing protein n=1 Tax=Corynebacterium otitidis ATCC 51513 TaxID=883169 RepID=K0YQW4_9CORY) HSP 1 Score: 100 bits (249), Expect = 1.640e-22 Identity = 72/180 (40.00%), Postives = 95/180 (52.78%), Query Frame = 1 Query: 19 NAPPTATLPV--LLHADCGL--VVQEMRWGLAA------KGFSTCNARAETAETKRTFKGLLPGRRCVVLLEGFYEWQRSGPKRRSFYATSDAPLLALAGLYQAGKGGRHYCTVLTVAAPPDLLWLHTRMPALLRDEGEVEAWLRPGP-APMRLLRP-PAAAMDFLRVVEVSSYVNAVKN 522 N PT T+PV L A GL +V+ RWGL KG + NARAETA TK +F+ G+RC++ ++G+YEW+ P+ F D +L AGL+ G R CT++T A+ + WLH RMP L D+ EVEAW A LL P P D L E +S V +V N Sbjct: 39 NVAPTQTVPVVRLRAAGEGLEALVEPARWGLYPHWKRDEKGPTLFNARAETAATKPSFRSATRGKRCLIPMDGYYEWKDKKPR---FVRRDDGRVLWAAGLWDTGLD-RLSCTIVTTASAKPIDWLHDRMPRFL-DDAEVEAWATGDEDAGRELLHPTPPRVRDRLVATEAASEVGSVAN 213
BLAST of mRNA_M-pyrifera_M_contig84893.19785.1 vs. uniprot
Match: UPI0009BD5DCF (uncharacterized protein LOC18440126 isoform X4 n=1 Tax=Amborella trichopoda TaxID=13333 RepID=UPI0009BD5DCF) HSP 1 Score: 100 bits (249), Expect = 2.270e-22 Identity = 60/162 (37.04%), Postives = 86/162 (53.09%), Query Frame = 1 Query: 4 YAGSCNAPPTATLPVLL---HADCGLVVQEMRWGLAAK---------GFSTCNARAETAETKRTFKGLLPGRRCVVLLEGFYEWQRSGPKRRSFYAT-SDAPLLALAGLYQAGKG----GRHYCTVLTVAAPPDLLWLHTRMPALLRDEGEVEAWLRPGPAP 438 Y S N P A LPVL + G VV M+WGL F NAR+E+ + K +F+ L+P +RC+V++EGFYEW++ G K++ +Y D L AGLY + G + T+LT L WLH RMP +L ++ ++AWL P+P Sbjct: 51 YRLSYNIAPGAYLPVLRKEQESKHGYVVHCMKWGLVPSFTKKTEKPDHFKMFNARSESIQEKASFRRLVPNKRCLVVVEGFYEWKKDGSKKQPYYLHFRDGRALVFAGLYDTWENSEGEGLYTFTILTTRCSSALDWLHDRMPVILGNKEAIDAWLNITPSP 212
BLAST of mRNA_M-pyrifera_M_contig84893.19785.1 vs. uniprot
Match: UPI001CC6E553 (abasic site processing protein YoqW isoform X2 n=1 Tax=Telopea speciosissima TaxID=54955 RepID=UPI001CC6E553) HSP 1 Score: 102 bits (254), Expect = 2.360e-22 Identity = 66/216 (30.56%), Postives = 99/216 (45.83%), Query Frame = 1 Query: 4 YAGSCNAPPTATLPVLLHADC----GLVVQEMRWGLAAK---------GFSTCNARAETAETKRTFKGLLPGRRCVVLLEGFYEWQRSGPKRRSFYAT-SDAPLLALAGLYQAGKGGR----HYCTVLTVAAPPDLLWLHTRMPALLRDEGEVEAWLRPGPAPMRLLRPPAAAMDFLRVVEVSSYVNAVKNRGERCRTPLADLSTAKGSLQSFFAR 597 Y S N PTA +PV+ D G V+ M+WGL F NAR+E+ K +F+ L+P RC+V +EGFYEW++ G K++ +Y D L A LY + + T++T + L WLH RMP +L +EG +AWL + + + P D + V+ + G C + S K S+ FF + Sbjct: 20 YRPSYNVSPTAYMPVVRREDGTGGDGAVLHCMKWGLIPSFTKKTEKPDHFKMFNARSESIREKASFRRLVPNNRCLVAVEGFYEWKKDGSKKQPYYIHFKDERPLVFAALYDSWNNSEGEVLYTFTIVTTCSSSSLQWLHDRMPVILGNEGSTDAWLNGSLSKLDSVLKPYEDPDLVWY-PVTPAMGKTSLNGPECIKEIQLKSKEKNSISKFFTK 234 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig84893.19785.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig84893.19785.1 >prot_M-pyrifera_M_contig84893.19785.1 ID=prot_M-pyrifera_M_contig84893.19785.1|Name=mRNA_M-pyrifera_M_contig84893.19785.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=216bp AYAGSCNAPPTATLPVLLHADCGLVVQEMRWGLAAKGFSTCNARAETAETback to top mRNA from alignment at M-pyrifera_M_contig84893:98..745- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig84893.19785.1 ID=mRNA_M-pyrifera_M_contig84893.19785.1|Name=mRNA_M-pyrifera_M_contig84893.19785.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=648bp|location=Sequence derived from alignment at M-pyrifera_M_contig84893:98..745- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig84893:98..745- >mRNA_M-pyrifera_M_contig84893.19785.1 ID=mRNA_M-pyrifera_M_contig84893.19785.1|Name=mRNA_M-pyrifera_M_contig84893.19785.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1296bp|location=Sequence derived from alignment at M-pyrifera_M_contig84893:98..745- (Macrocystis pyrifera P11B4 male)back to top |