mRNA_M-pyrifera_M_contig84891.19783.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig84891.19783.1
Unique NamemRNA_M-pyrifera_M_contig84891.19783.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig84891.19783.1 vs. uniprot
Match: A0A7C5EIC2_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C5EIC2_9BACT)

HSP 1 Score: 249 bits (637), Expect = 2.400e-73
Identity = 138/289 (47.75%), Postives = 178/289 (61.59%), Query Frame = 1
Query:    1 RAAPVAEWIRRASKGRTRTVLLGRKGAHLGNEFDLSVAPAYVGLYPDPRRIETTVPLTRVRQSELDEAAQRWLPVLGAAASPRIALLVGGDDSVHALDAEQARHMGGQVGTLARNAGGSVFVTTSRRTDTDAARALVDALGNVTVHSYHWSRAHTADENPYFGYLALADILIVSGESASMLAEATATGKPVLIYPLGKRGKDTHRVKFLLGQGVSDWIMRRAFARPVNRRGLERPQTGIELFCAKLAAGGWVRPHGDITKLHDALIKRGVARYFDGDLPQGTAAPMNEA 867
            R APVA WIRR++ G+T+ V  GR G    + FDL VAP Y  L+P  RR++  +P+TRV Q+ LDEA  +W   L A   PR ALL+GG ++ H+  +  AR MG +V   AR AG  ++VTTSRRT   +A AL  ALG++    Y W+     +ENP+ G+LALAD LIV+GESASMLAEA A+G+PV IYPL +  +       L+ + VSD I  RA+ RPVNRRG ERPQ  +E   A L A GW+RP G   +LH  L+  G+AR F  D P     P   A
Sbjct:  499 RTAPVAAWIRRSALGKTKVVQGGRLGTLRDDPFDLGVAPRYAQLFPHERRMDVDLPITRVTQTALDEARGQWESRLDADGRPRWALLIGGPNAEHSFSSGAARRMGERVAERARAAGARIWVTTSRRTPKASADALEAALGDLCTRFYRWTPGAPGEENPFMGFLALADRLIVTGESASMLAEACASGRPVEIYPLPRSMRTPSAWVRLIARAVSDRIAARAYKRPVNRRGFERPQRRLERVSAGLLARGWIRPGGHSRQLHRHLVDAGLARIFGDDTPIRPGRPSETA 787          
BLAST of mRNA_M-pyrifera_M_contig84891.19783.1 vs. uniprot
Match: A0A7W1UA65_9BACT (Mitochondrial fission ELM1 family protein n=2 Tax=Nitrospirales bacterium TaxID=2358460 RepID=A0A7W1UA65_9BACT)

HSP 1 Score: 216 bits (550), Expect = 5.050e-61
Identity = 121/288 (42.01%), Postives = 167/288 (57.99%), Query Frame = 1
Query:    1 RAAPVAEWIRRASKGRTRTVLLGRKGAHLGNEFDLSVAPAYVGLYPDPRRIETTVPLTRVRQSELDEAAQRWLPVLGAAASPRIALLVGGDDSVHALDAEQARHMGGQVGTLARNAGGSVFVTTSRRTDTDAARALVDALGNVTVHSYHWSRAHTADENPYFGYLALADILIVSGESASMLAEATATGKPVLIYPLGKRGKDTHRVKFLLGQGVSDWIMRRAFARPVNRRGLERPQTGIELFCAKLAAGGWVRPHGDITKLHDALIKRGVARYFDGDLPQGTAAPMNE 864
            R AP+A WIR  S+GRTR + LGRKG    + FD+ + P Y G  P P RIET  PL  + Q +L+  +QRW  + G A  PRI  +VGG  +      +    +G Q+  LA    G +F  TS RT  + ++AL D L     H  H  + + +D NPYF YLA AD+LIV+GES SMLAEA + GKP+ I PL +    T  V+      +S+ +++RA ++P+N+RG  RPQ GIE  CA+L   G ++P  ++T LHD+L K GVAR F   +  G    +NE
Sbjct:  511 RPAPIARWIRDQSQGRTRIIQLGRKGGGPADLFDVVITPTYYGFSPHPNRIETFAPLNGLTQEDLETVSQRWPDLFGNAPHPRIVFVVGGSTARFKFTPDMVHMIGNQLKDLAERCHGKIFAVTSPRTGKELSQALEDTL--TPDHVVHTWQPNQSD-NPYFAYLAGADVLIVTGESESMLAEAASLGKPIYIVPLSEHSP-TWTVR------LSEKMVQRAHSQPLNKRGTARPQQGIERLCARLIRSGLIQPRRNLTMLHDSLFKNGVARPFGEPIENGKRPQLNE 788          
BLAST of mRNA_M-pyrifera_M_contig84891.19783.1 vs. uniprot
Match: UPI0014733DA8 (mitochondrial fission ELM1 family protein n=1 Tax=Salifodinibacter halophilus TaxID=2723847 RepID=UPI0014733DA8)

HSP 1 Score: 213 bits (543), Expect = 5.680e-60
Identity = 122/284 (42.96%), Postives = 166/284 (58.45%), Query Frame = 1
Query:   13 VAEWIRRASKGRTRTVLLGRKGAHLGNEFDLSVAPAYVGLYPDPRRIETTVPLTRVRQSELDEAAQRWLPVLGAAASPRIALLVGGDDSVHALDAEQARHMGGQVGTLARNAGGSVFVTTSRRTDTDAARALVDALGNVTVHSYHWSRAHTADENPYFGYLALADILIVSGESASMLAEATATGKPVLIYPLGKRGKDTHRVKFLLGQGVSDWIMRRAFARPVNRRGLERPQTGIELFCAKLAAGGWVRPHGDITKLHDALIKRGVARYFDGDLPQGTAAPMNE 864
            VA WI+R S+  TR +LLGR+G  +G   D++V   +  L P PR+IET +P  + +   L  A QRW  +   A+ P++A LVGGD ++HALDAE A   G  + +    AGG + V TSRRT + AA AL ++LG        W     AD NPY GYLA ADI++V+GES SMLAEA AT KPV I PL  +G+   R +      ++DW++R+A     N RG +RPQ G++  CA++    W+ P  D   LH+ALI+ GVAR  D +L      P  E
Sbjct:  508 VARWIQRHSRAATRLILLGRRGGRVGEAEDVAVVCQHFNLPPHPRQIETVLPPCKAQADRLASARQRWPDLYPDASGPKVAFLVGGDSAIHALDAETAASFGADIQSQVDTAGGGLAVLTSRRTRSAAADALRNSLGREACF-VPWGNYTDAD-NPYLGYLASADIVVVTGESESMLAEAVATEKPVYIAPLPPQGRVGLRRR------LADWVVRQANTDRYNARGSKRPQQGLQYLCARIVDRRWLLPRRDTYALHNALIEAGVARMIDTELVAWQPPPWQE 783          
BLAST of mRNA_M-pyrifera_M_contig84891.19783.1 vs. uniprot
Match: A0A524NHA4_9DELT (Uncharacterized protein n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A524NHA4_9DELT)

HSP 1 Score: 210 bits (535), Expect = 9.640e-59
Identity = 118/288 (40.97%), Postives = 161/288 (55.90%), Query Frame = 1
Query:    1 RAAPVAEWIRRASKGRTRTVLLGRKGAHLGNEFDLSVAPAYVGLYPDPRRIETTVPLTRVRQSELDEAAQRWLPVLGAAASPRIALLVGGDDSVHALDAEQARHMGGQVGTLARNAGGSVFVTTSRRTDTDAARALVDALGNVTVHSYHWSRAHTADENPYFGYLALADILIVSGESASMLAEATATGKPVLIYPLGKRGKDTHRVKFLLGQGVSDWIMRRAFARPVNRRGLERPQTGIELFCAKLAAGGWVRPHGDITKLHDALIKRGVARYFDGDLPQGTAAPMNE 864
            R AP++ WI + S+G TRTV +GRKG  +   FD  V  +++ L  D RR+ET  PL RV   EL++AA+RW  + G    P I LLVGG  + H LD + A  MG +VG  A+ AGG+V   TSRR+  D   AL   LG       HW  +    ENPY  YLALAD ++V+G+S SMLAEA ATG+PV IYP+  R    +          ++ + R A++RP   +G  RPQ G E  CA++     VRP  D+  + + L++ G AR+F   L      P+ E
Sbjct:  524 RTAPLSRWIAKQSRGATRTVQMGRKGGDVARHFDAVVTCSHLRLPMDDRRVETLAPLNRVTPGELEQAAERWPRLFGETPKPHIVLLVGGTSAEHRLDPQTATRMGDEVGRFAQQAGGTVLAVTSRRSGRDVEEALEAGLGASGCVD-HWEASR--HENPYLAYLALADAIVVTGDSESMLAEAVATGRPVYIYPVPTRPLGLY-------SRFAEMVTRIAYSRPKKAKGTVRPQQGREYLCARMIERAVVRPPRDLDVMCEQLVRHGHARWFGEPLASKQVKPLRE 801          
BLAST of mRNA_M-pyrifera_M_contig84891.19783.1 vs. uniprot
Match: A0A2E9GSC3_9DELT (Uncharacterized protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2E9GSC3_9DELT)

HSP 1 Score: 204 bits (518), Expect = 6.020e-57
Identity = 128/285 (44.91%), Postives = 161/285 (56.49%), Query Frame = 1
Query:    1 RAAPVAEWIRRASKGRTRTVLLGRKGAHLGNEFDLSVAPAYVGLYPDPRRIETTVPLTRVRQSELDEAAQRWLPVLGAAASPRIALLVGGDDSVHALDAEQARHMGGQVGTLARNAGGSVFVTTSRRTDTDAARALVDALGNVTVHSYHWSRAHTADENPYFGYLALADILIVSGESASMLAEATATGKPVLIYPLGKRGKDTHRVKFLLGQGVSDWIMRRAFARPVNRRGLERPQTGIELFCAKLAAGGWVRPHGDITKLHDALIKRGVARYFDGDLPQGTAAP 855
            R APV+  +R AS G  R V LGRKGA     FDL+V PAY  L+P P R+    PL RV    + EA   W        +PRIALLVGG    + +D   AR MG  V   AR AGGSV V+TSRRT    A AL  AL  +  H Y    A  A ENPY GYLA AD L+V+ +S SML E  + GKP+ I+PL +R        F L +   + ++RRA A+P+ +R   RPQ G+EL CA+L   GWVRP  D++ LH  L +RG+A    G+ P+  A P
Sbjct:  420 RTAPVSLALREASAGAARLVQLGRKGADDAALFDLAVTPAYTRLFPHPHRLVLDGPLHRVTPERIAEARVHWKERFETLPAPRIALLVGGTSGQYRIDGATARRMGEAVARRAREAGGSVLVSTSRRTGDAPAHALRTALEGIPSHFYG---AGGAGENPYLGYLAWADELVVTADSESMLVECGSLGKPLSIHPLPERWS------FRLLRFFREAVLRRARAQPLGQRETGRPQQGLELLCARLIERGWVRPTRDLSLLHADLERRGLAVAL-GEPPRVPAEP 694          
BLAST of mRNA_M-pyrifera_M_contig84891.19783.1 vs. uniprot
Match: A0A534Q9Z6_9DELT (Uncharacterized protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534Q9Z6_9DELT)

HSP 1 Score: 204 bits (520), Expect = 6.570e-57
Identity = 122/288 (42.36%), Postives = 154/288 (53.47%), Query Frame = 1
Query:    1 RAAPVAEWIRRASKGRTRTVLLGRKGAHLGNEFDLSVAPAYVGLYPDPRRIETTVPLTRVRQSELDEAAQRWLPVLGAAASPRIALLVGGDDSVHALDAEQARHMGGQVGTLARNAGGSVFVTTSRRTDTDAARALVDALGNVTVHSYHWSRAHTADENPYFGYLALADILIVSGESASMLAEATATGKPVLIYPLGKRGKDTHRVKFLLGQGVSDWIMRRAFARPVNRRGLERPQTGIELFCAKLAAGGWVRPHGDITKLHDALIKRGVARYFDGDLPQGTAAPMNE 864
            R APVAEWIR  S+ R R V LGRK     +  D  V P+Y  L+P PRRIET  PL RV +  L +A + W   L  A +PRIA+L GG    + L   +A  +G     LAR  GGS+F TTSRR    A  A   A+G +  H  H  R      NPY G LA AD  +++G+S SMLAEAT+ G+PV IY L  R        F       +W+ RRA A+P+  RG  RPQ G+E +C K    G+V         H AL +R +AR FDG LP    AP ++
Sbjct:  483 RTAPVAEWIRAQSRDRARIVALGRKTGDDADRCDRVVTPSYARLFPHPRRIETAGPLHRVTRDALAKAREEWADRLADAPAPRIAVLAGGTSGQYRLGPAEAGRLGAACAQLARACGGSLFATTSRRLGPAATEAFCAAVGEI--HFLHRWRPDDPS-NPYLGLLAHADAFVITGDSESMLAEATSLGRPVAIYELPVRAS------FRTLSAFREWVWRRATAKPLGPRGTPRPQRGLERWCGKAIERGYVXXXXXXXXXHAALFERELARPFDGSLPLAHGAPSDD 761          
BLAST of mRNA_M-pyrifera_M_contig84891.19783.1 vs. uniprot
Match: A0A2N1XWG1_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium HGW-Gammaproteobacteria-3 TaxID=2013799 RepID=A0A2N1XWG1_9GAMM)

HSP 1 Score: 202 bits (513), Expect = 9.290e-56
Identity = 117/274 (42.70%), Postives = 160/274 (58.39%), Query Frame = 1
Query:   13 VAEWIRRASKGRTRTVLLGRKGAHLGNEFDLSVAPAYVGLYPDPRRIETTVPLTRVRQSELDEAAQRWLPVLGAAASPRIALLVGGDDSVHALDAEQARHMGGQVGTLARNAGGSVFVTTSRRTDTDAARALVDALGNVTVHSYHWSRAHTADENPYFGYLALADILIVSGESASMLAEATATGKPVLIYPLGKRGKDTHRVKFLLGQGVSDWIMRRAFARPVNRRGLERPQTGIELFCAKLAAGGWVRPHGDITKLHDALIKRGVARYFDGDL 834
            VA WI + + G TR +L+GR+G  +G   DL++   +  L P P+ IET +P ++V    L +AA RW  + G  A PR+ LLVGGD + + L+A+ A+ M  +V       GG++ V TSRRT  +A  AL    G   + S  W R    ++NPY GYLA ADILIV+G+S SMLAEA  TGKPV IYPL  R  D       L Q ++DW++R+A    +N RG  RPQ G+   CA+L     + P  +I  L  AL++RGVAR F+  L
Sbjct:  504 VARWIVQCNHGATRLILMGRRGGPVGESQDLAIQCRHFDLPPHPQHIETVLPPSKVDAQSLAQAAARWPALFGDGAHPRVVLLVGGDCAQYELNADTAKQMASRVRRQIDTIGGTLAVVTSRRTRPEAQAALQAGAGENAL-SEAW-RPQAKEDNPYLGYLAAADILIVTGDSESMLAEAVNTGKPVYIYPLPTRPPD-------LRQRLTDWVIRQAQTGRLNARGSRRPQQGLHYLCARLIEQRIMLPQRNIPALQQALVERGVARLFEDSL 768          
BLAST of mRNA_M-pyrifera_M_contig84891.19783.1 vs. uniprot
Match: A0A2D6BH72_9DELT (Uncharacterized protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2D6BH72_9DELT)

HSP 1 Score: 201 bits (511), Expect = 1.080e-55
Identity = 122/290 (42.07%), Postives = 159/290 (54.83%), Query Frame = 1
Query:    1 RAAPVAEWIRRASKGRTRTVLLGRKGAHLGNEFDLSVAPAYVGLYPDPRRIETTVPLTRVRQSELDEAAQRWLPVL-GAAASPRIALLVGGDDSVHALDAEQARHMGGQVGTLARNAGGSVFVTTSRRTDTDAARALVDALGNVTVHSYHWSRAHTADENPYFGYLALADILIVSGESASMLAEATATGKPVLIYPLGKRGKDTHRVKFLLGQGVSDWIMRRAFARPVNRRGLERPQTGIELFCAKLAAGGWVRPHGDITKLHDALIKRGVARYFDGDLPQGTAAPMNEA 867
            RAAPVA W+R  ++GRTR V LGRKG      FDL+V P +  L+P P R+ET +P++RV  +EL  A  RW   L G    PRI +LVGG+ +       +AR +G  +  LA   GG ++VTTS RT + A  AL  AL +     + W       E PY G LAL D+L+V+GES SMLAEA AT +PVL+YPL   G         LG  V D ++ RA     N RG   PQ G+  + A+L   G VRP  D+ +LH+ LI+ G   +F        A P  EA
Sbjct:  466 RAAPVALWVRARAQGRTRVVHLGRKGGAAAGLFDLAVTPKHARLWPHPSRVETVLPVSRVNDAELARAVDRWKETLEGDPLRPRIGVLVGGETAKFRFGESEARQLGRDLTGLAAKLGGRLWVTTSPRTGSVATEALGGAL-DAEARFFRWREG--GPETPYLGILALCDLLVVTGESESMLAEACATDRPVLVYPLPAAGGGVG-----LGGRVVDGLLARATTDRPNERGTAAPQRGLARWSARLVDAGLVRPTRDLRRLHEELIRLGRIEFFHDAPRLDAATPHREA 747          
BLAST of mRNA_M-pyrifera_M_contig84891.19783.1 vs. uniprot
Match: A0A084IP54_SALHC (Uncharacterized protein n=2 Tax=Salinisphaera TaxID=180541 RepID=A0A084IP54_SALHC)

HSP 1 Score: 199 bits (506), Expect = 8.630e-55
Identity = 119/286 (41.61%), Postives = 164/286 (57.34%), Query Frame = 1
Query:    7 APVAEWIRRASKGRTRTVLLGRKGAHLGNEFDLSVAPAYVGLYPDPRRIETTVPLTRVRQSELDEAAQRWLPVLGAAASPRIALLVGGDDSVHALDAEQARHMGGQVGTLARNAGGSVFVTTSRRTDTDAARALVDALGNVTVHSYHWSRAHTADENPYFGYLALADILIVSGESASMLAEATATGKPVLIYPLGKRGKDTHRVKFLLGQGVSDWIMRRAFARPVNRRGLERPQTGIELFCAKLAAGGWVRPHGDITKLHDALIKRGVARYFDGDLPQGTAAPMNE 864
            A  A  I + S   +R VL+GR+G  +G   D++V   +  L P+PR+IET +P  +V  S+L  A +RW  +  +AA  RI  LVGGD++ HALDAE A  + G+V   A  AGG + V TSRRT T+AA A+   L + +     W  A   D NPY GYLA ADIL+V+GES SM+AEA ATGKPV I PL +   +  R        ++DW++ +A     N RG  RPQ G++  CA+L     + P  D+  LH+AL+  GVAR   G+L   +    +E
Sbjct:  498 AIAARAISQRSGAASRLVLMGRRGGRVGESQDIAVVCRHFRLPPNPRQIETILPPNKVAPSQLAAARERWPDLFSSAAERRIVWLVGGDNAQHALDAETAGELTGRVQAQADAAGGELAVLTSRRTRTEAAEAIRQRLASASTF-VPWEPAEQGD-NPYLGYLAAADILVVTGESESMIAEAVATGKPVYIAPLPEAKPNLRR-------RIADWVVTQAEHDRFNARGSRRPQEGLQYACARLVDRRVLLPRRDMAALHEALVTHGVARLLGGELESWSPPAWHE 774          
BLAST of mRNA_M-pyrifera_M_contig84891.19783.1 vs. uniprot
Match: A0A523PBC2_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A523PBC2_9BACT)

HSP 1 Score: 196 bits (499), Expect = 9.540e-54
Identity = 114/252 (45.24%), Postives = 153/252 (60.71%), Query Frame = 1
Query:    1 RAAPVAEWIRRASKGRTRTVLLGRKGAHLGNEFDLSVAPAYVGLYPDPRRIETTVPLTRVRQSELDEAAQRWLPVLGAAASPRIALLVGGDDSVHALDAEQARHMGGQVGTLARNAGGSVFVTTSRRTDTDAARALVDALGNVTVHSYHWSRAHTADENPYFGYLALADILIVSGESASMLAEATATGKPVLIYPLGKRGKDTHRVKFLLGQGVSDWIMRRAFARPVNRRGLERPQTGIELFCAKLAAGGWV 756
            R APVA WI   S+GRTR V LGRKG H+ + FDL V P +    P  +R+ET +P+  +  + L EA +R+  +  +   P +ALLVGG    + LDA  AR +G +    AR+ GGSVF  TSRRT  +AA AL  ALG+ +   + W  A   + NPY  YLALAD++IVSGES SMLA+A ATGKPV ++PL  R     + +F        W+  R+  +P+N+RG  RPQ G+E  CA+L  GG+V
Sbjct:  516 RTAPVARWIAAQSRGRTRLVQLGRKGGHVADSFDLVVTPEHCRYPPHKKRLETRLPINPITSAGLAEAHERFQGLFDSGPRPHVALLVGGSIGRYRLDAATARRLGEESIAAARDIGGSVFAITSRRTSAEAATALEAALGSES-RLHRWRPAE--ERNPYPAYLALADVIIVSGESESMLADAIATGKPVYMFPLPGRASGV-KGRF------QRWVYDRSQEQPLNKRGTVRPQRGLERLCARLVEGGFV 757          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig84891.19783.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7C5EIC2_9BACT2.400e-7347.75Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
A0A7W1UA65_9BACT5.050e-6142.01Mitochondrial fission ELM1 family protein n=2 Tax=... [more]
UPI0014733DA85.680e-6042.96mitochondrial fission ELM1 family protein n=1 Tax=... [more]
A0A524NHA4_9DELT9.640e-5940.97Uncharacterized protein n=1 Tax=Myxococcales bacte... [more]
A0A2E9GSC3_9DELT6.020e-5744.91Uncharacterized protein n=1 Tax=Deltaproteobacteri... [more]
A0A534Q9Z6_9DELT6.570e-5742.36Uncharacterized protein n=1 Tax=Deltaproteobacteri... [more]
A0A2N1XWG1_9GAMM9.290e-5642.70Uncharacterized protein n=1 Tax=Gammaproteobacteri... [more]
A0A2D6BH72_9DELT1.080e-5542.07Uncharacterized protein n=1 Tax=Deltaproteobacteri... [more]
A0A084IP54_SALHC8.630e-5541.61Uncharacterized protein n=2 Tax=Salinisphaera TaxI... [more]
A0A523PBC2_9BACT9.540e-5445.24Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig84891contigM-pyrifera_M_contig84891:6..872 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score199.1
Seed ortholog evalue2.8e-48
Seed eggNOG ortholog1304275.C41B8_04631
KEGG koko:K07276
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Mitochondrial fission ELM1
EggNOG OGs1R70U@1224,1S0W8@1236,COG3660@1,COG3660@2
COG Functional cat.M
Best tax levelGammaproteobacteria
Best eggNOG OGNA|NA|NA
BRITEko00000
Exons1
Model size867
Cds size867
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816756.3345182-CDS-M-pyrifera_M_contig84891:5..8721622816756.3345182-CDS-M-pyrifera_M_contig84891:5..872Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig84891 6..872 +
1692278159.7590652-CDS-M-pyrifera_M_contig84891:5..8721692278159.7590652-CDS-M-pyrifera_M_contig84891:5..872Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig84891 6..872 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig84891.19783.1prot_M-pyrifera_M_contig84891.19783.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig84891 6..872 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig84891.19783.1

>prot_M-pyrifera_M_contig84891.19783.1 ID=prot_M-pyrifera_M_contig84891.19783.1|Name=mRNA_M-pyrifera_M_contig84891.19783.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=289bp
RAAPVAEWIRRASKGRTRTVLLGRKGAHLGNEFDLSVAPAYVGLYPDPRR
IETTVPLTRVRQSELDEAAQRWLPVLGAAASPRIALLVGGDDSVHALDAE
QARHMGGQVGTLARNAGGSVFVTTSRRTDTDAARALVDALGNVTVHSYHW
SRAHTADENPYFGYLALADILIVSGESASMLAEATATGKPVLIYPLGKRG
KDTHRVKFLLGQGVSDWIMRRAFARPVNRRGLERPQTGIELFCAKLAAGG
WVRPHGDITKLHDALIKRGVARYFDGDLPQGTAAPMNEA
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mRNA from alignment at M-pyrifera_M_contig84891:6..872+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig84891.19783.1 ID=mRNA_M-pyrifera_M_contig84891.19783.1|Name=mRNA_M-pyrifera_M_contig84891.19783.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=867bp|location=Sequence derived from alignment at M-pyrifera_M_contig84891:6..872+ (Macrocystis pyrifera P11B4 male)
CGCGCAGCGCCGGTTGCGGAATGGATCCGGCGCGCCTCGAAAGGTCGTAC ACGTACCGTACTCCTCGGGCGCAAGGGCGCGCATCTTGGCAATGAATTCG ATTTGTCCGTGGCGCCGGCATACGTCGGCCTGTACCCGGACCCGCGACGG ATCGAGACCACGGTACCGCTGACCCGCGTGCGGCAGTCGGAACTCGACGA GGCGGCGCAACGCTGGCTGCCCGTGCTCGGTGCCGCGGCATCGCCGCGTA TCGCCCTGCTCGTCGGCGGCGACGACAGTGTGCACGCGCTCGATGCGGAA CAGGCACGCCATATGGGCGGCCAGGTGGGAACGCTCGCGCGCAACGCCGG CGGATCGGTCTTCGTGACCACGAGTCGCAGGACCGACACGGATGCGGCGC GCGCGCTCGTCGATGCGCTCGGCAATGTCACCGTGCACTCCTACCACTGG AGCCGTGCGCACACAGCCGACGAGAATCCGTATTTCGGGTACCTCGCGCT GGCCGATATTCTCATTGTCAGCGGTGAGAGCGCATCGATGCTCGCCGAAG CCACGGCAACCGGGAAGCCCGTGTTGATCTATCCGCTGGGCAAGCGCGGC AAGGACACGCACCGGGTGAAATTCCTGCTTGGCCAGGGCGTGTCGGACTG GATCATGCGGCGTGCATTCGCGCGGCCGGTCAACCGTCGCGGCCTCGAAC GCCCGCAAACCGGTATCGAATTGTTCTGCGCGAAACTCGCCGCGGGCGGC TGGGTGCGTCCGCATGGCGATATCACGAAGCTGCACGATGCGCTGATTAA ACGCGGGGTTGCGCGATATTTCGACGGTGATCTGCCGCAGGGTACGGCGG CGCCGATGAATGAGGCG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig84891:6..872+

>mRNA_M-pyrifera_M_contig84891.19783.1 ID=mRNA_M-pyrifera_M_contig84891.19783.1|Name=mRNA_M-pyrifera_M_contig84891.19783.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1734bp|location=Sequence derived from alignment at M-pyrifera_M_contig84891:6..872+ (Macrocystis pyrifera P11B4 male)
CGCGCAGCGCCGGTTGCGGAATGGATCCGGCGCGCCTCGAAAGGTCGTAC
ACGTACCGTACTCCTCGGGCGCAAGGGCGCGCATCTTGGCAATGAATTCG
ATTTGTCCGTGGCGCCGGCATACGTCGGCCTGTACCCGGACCCGCGACGG
ATCGAGACCACGGTACCGCTGACCCGCGTGCGGCAGTCGGAACTCGACGA
GGCGGCGCAACGCTGGCTGCCCGTGCTCGGTGCCGCGGCATCGCCGCGTA
TCGCCCTGCTCGTCGGCGGCGACGACAGTGTGCACGCGCTCGATGCGGAA
CAGGCACGCCATATGGGCGGCCAGGTGGGAACGCTCGCGCGCAACGCCGG
CGGATCGGTCTTCGTGACCACGAGTCGCAGGACCGACACGGATGCGGCGC
GCGCGCTCGTCGATGCGCTCGGCAATGTCACCGTGCACTCCTACCACTGG
AGCCGTGCGCACACAGCCGACGAGAATCCGTATTTCGGGTACCTCGCGCT
GGCCGATATTCTCATTGTCAGCGGTGAGAGCGCATCGATGCTCGCCGAAG
CCACGGCAACCGGGAAGCCCGTGTTGATCTATCCGCTGGGCAAGCGCGGC
AAGGACACGCACCGGGTGAAATTCCTGCTTGGCCAGGGCGTGTCGGACTG
GATCATGCGGCGTGCATTCGCGCGGCCGGTCAACCGTCGCGGCCTCGAAC
GCCCGCAAACCGGTATCGAATTGTTCTGCGCGAAACTCGCCGCGGGCGGC
TGGGTGCGTCCGCATGGCGATATCACGAAGCTGCACGATGCGCTGATTAA
ACGCGGGGTTGCGCGATATTTCGACGGTGATCTGCCGCAGGGTACGGCGG
CGCCGATGAATGAGGCGCGCGCAGCGCCGGTTGCGGAATGGATCCGGCGC
GCCTCGAAAGGTCGTACACGTACCGTACTCCTCGGGCGCAAGGGCGCGCA
TCTTGGCAATGAATTCGATTTGTCCGTGGCGCCGGCATACGTCGGCCTGT
ACCCGGACCCGCGACGGATCGAGACCACGGTACCGCTGACCCGCGTGCGG
CAGTCGGAACTCGACGAGGCGGCGCAACGCTGGCTGCCCGTGCTCGGTGC
CGCGGCATCGCCGCGTATCGCCCTGCTCGTCGGCGGCGACGACAGTGTGC
ACGCGCTCGATGCGGAACAGGCACGCCATATGGGCGGCCAGGTGGGAACG
CTCGCGCGCAACGCCGGCGGATCGGTCTTCGTGACCACGAGTCGCAGGAC
CGACACGGATGCGGCGCGCGCGCTCGTCGATGCGCTCGGCAATGTCACCG
TGCACTCCTACCACTGGAGCCGTGCGCACACAGCCGACGAGAATCCGTAT
TTCGGGTACCTCGCGCTGGCCGATATTCTCATTGTCAGCGGTGAGAGCGC
ATCGATGCTCGCCGAAGCCACGGCAACCGGGAAGCCCGTGTTGATCTATC
CGCTGGGCAAGCGCGGCAAGGACACGCACCGGGTGAAATTCCTGCTTGGC
CAGGGCGTGTCGGACTGGATCATGCGGCGTGCATTCGCGCGGCCGGTCAA
CCGTCGCGGCCTCGAACGCCCGCAAACCGGTATCGAATTGTTCTGCGCGA
AACTCGCCGCGGGCGGCTGGGTGCGTCCGCATGGCGATATCACGAAGCTG
CACGATGCGCTGATTAAACGCGGGGTTGCGCGATATTTCGACGGTGATCT
GCCGCAGGGTACGGCGGCGCCGATGAATGAGGCG
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