mRNA_M-pyrifera_M_contig83520.19512.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig83520.19512.1
Unique NamemRNA_M-pyrifera_M_contig83520.19512.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig83520.19512.1 vs. uniprot
Match: A0A2D9C6A8_9BACT (DNA primase n=2 Tax=Phycisphaerae TaxID=666505 RepID=A0A2D9C6A8_9BACT)

HSP 1 Score: 474 bits (1220), Expect = 2.940e-162
Identity = 236/300 (78.67%), Postives = 263/300 (87.67%), Query Frame = 1
Query:    1 KAKGREYVGLCPFHDDRNPSMCVVPTKQIFHCFVCGAGGDVFSFVQKYHSMDFREALEFLAERGNIELTKFNANKQAG-SAEHEHP-GVGRKEIIAANESAMSYFRAILAHDEHGAIARELIERRGISQEMIERFAIGSSADRWDGLSLTIDNKKLNREAFLAAGLLKQRDNG-GEYDALRNRLIFPIHDQIGRVIAFGGRKINEEDEPKYLNSPETAVFRKSTTLFGLNHAARAIKQRRTAVIVEGYTDVIACHQAGIEHVVGTLGTALTSGHATVLRRLCDTVVLLFDGDEAGQRAAD 891
            K KGREYVGLCPFHDDRNPSMCV+PTKQIFHCFVCG GGDVF+FVQKYHSM FREALEFLA+R NIELT    +K  G SAE   P GVG +E++AAN+ A  +FRAIL+H EHG+ ARE+IERRGIS EM+ERF IG+S DRWDGL +   +K++  EA LAAGL+KQR+ G G+YDALRNRLIFPI DQIGRVIAFGGRKI+EEDEPKYLNSPETAVF+KSTTLFG+NHAARAIK+ RTAVIVEGYTDVIACHQAG+EHVVGTLGTALTSGHATVLRRLCDTVVLLFDGD AG +AAD
Sbjct:   28 KPKGREYVGLCPFHDDRNPSMCVIPTKQIFHCFVCGTGGDVFTFVQKYHSMGFREALEFLAQRANIELT---VHKPRGRSAEDGEPSGVGNREVLAANDLAAGFFRAILSHPEHGSAAREVIERRGISDEMVERFMIGASPDRWDGLGMFAQSKEVRTEALLAAGLVKQRERGDGQYDALRNRLIFPICDQIGRVIAFGGRKIDEEDEPKYLNSPETAVFKKSTTLFGINHAARAIKRERTAVIVEGYTDVIACHQAGVEHVVGTLGTALTSGHATVLRRLCDTVVLLFDGDAAGIKAAD 324          
BLAST of mRNA_M-pyrifera_M_contig83520.19512.1 vs. uniprot
Match: A0A2A4RFA8_9BACT (DNA primase n=1 Tax=bacterium TaxID=1869227 RepID=A0A2A4RFA8_9BACT)

HSP 1 Score: 472 bits (1215), Expect = 5.500e-161
Identity = 225/301 (74.75%), Postives = 255/301 (84.72%), Query Frame = 1
Query:    1 KAKGREYVGLCPFHDDRNPSMCVVPTKQIFHCFVCGAGGDVFSFVQKYHSMDFREALEFLAERGNIELTKFNAN----KQAGSAEHEHPGVGRKEIIAANESAMSYFRAILAHDEHGAIARELIERRGISQEMIERFAIGSSADRWDGLSLTIDNKKLNREAFLAAGLLKQRDNGGEYDALRNRLIFPIHDQIGRVIAFGGRKINEEDEPKYLNSPETAVFRKSTTLFGLNHAARAIKQRRTAVIVEGYTDVIACHQAGIEHVVGTLGTALTSGHATVLRRLCDTVVLLFDGDEAGQRAAD 891
            K KGREYVGLCPFHDDRNPSMCV+P KQIFHCFVCG GGDVF+F+QKYHSM FRE+LE+LAERGNIELTKFN N            EH GVG+KEI+AAN++  S+F+ IL H EHG +AR +IE+RGIS +M+ERFAIG+S DRWDGL  T   K LN +A + AGL+K +D+GG YDALRNRLIFPI DQIGRVIAFGGR ++E+D PKYLNSPET VFRKSTTL+G+NHA RAIK+ RTAVIVEGYTDVIACHQAG+EHVVGTLGTALT GHATVLRRLCDTVVLLFDGDEAG +AAD
Sbjct:   55 KPKGREYVGLCPFHDDRNPSMCVIPAKQIFHCFVCGTGGDVFTFIQKYHSMGFRESLEYLAERGNIELTKFNPNGDPNNSGAGVPFEHTGVGKKEIMAANQAGQSFFQTILTHPEHGTLARSIIEKRGISHDMVERFAIGASPDRWDGLLKTAQAKGLNLDALIGAGLIKAKDSGGHYDALRNRLIFPICDQIGRVIAFGGRIMDEDDAPKYLNSPETPVFRKSTTLYGINHAQRAIKKERTAVIVEGYTDVIACHQAGVEHVVGTLGTALTKGHATVLRRLCDTVVLLFDGDEAGIKAAD 355          
BLAST of mRNA_M-pyrifera_M_contig83520.19512.1 vs. uniprot
Match: A0A3M2CQP6_9BACT (DNA primase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3M2CQP6_9BACT)

HSP 1 Score: 461 bits (1187), Expect = 2.330e-156
Identity = 222/298 (74.50%), Postives = 256/298 (85.91%), Query Frame = 1
Query:    1 KAKGREYVGLCPFHDDRNPSMCVVPTKQIFHCFVCGAGGDVFSFVQKYHSMDFREALEFLAERGNIELTKFNANKQAGSAEHEHPGVGRK-EIIAANESAMSYFRAILAHDEHGAIARELIERRGISQEMIERFAIGSSADRWDGLSLTIDNKKLNREAFLAAGLLKQRDNGGEYDALRNRLIFPIHDQIGRVIAFGGRKINEEDEPKYLNSPETAVFRKSTTLFGLNHAARAIKQRRTAVIVEGYTDVIACHQAGIEHVVGTLGTALTSGHATVLRRLCDTVVLLFDGDEAGQRAAD 891
            K KGRE+VGLCPFHDDRNPSMCVVP KQIFHCFVCG GGDVFSFVQKYHSMDFREALEFLA+R  IELT+    ++ G+AE     V  K +I+ AN+ A ++FRAIL+H EHG  ARELI RRGIS EM+ERF IG++ DRWDGL +TI+ K LN  AF AAGLLK R++GG+YDALRNRLIFPI DQ+GRVIAFGGR+IN+ED+PKYLNSPET  FRK+TTL+GL HA+RAI+QRRTAV+VEGYTDV+ACHQ GIEHVVGTLGTALT+GHA VLRRLCD+VVLLFDGD AG++AAD
Sbjct:   89 KPKGREFVGLCPFHDDRNPSMCVVPAKQIFHCFVCGTGGDVFSFVQKYHSMDFREALEFLAQRAGIELTRRQPQREDGAAERTGASVVTKADILKANDIAQAFFRAILSHPEHGRSARELIARRGISPEMVERFGIGAAPDRWDGLLVTIEKKGLNPRAFEAAGLLKTRESGGKYDALRNRLIFPIQDQLGRVIAFGGRRINDEDDPKYLNSPETLAFRKNTTLYGLTHASRAIQQRRTAVVVEGYTDVVACHQHGIEHVVGTLGTALTTGHAAVLRRLCDSVVLLFDGDAAGEKAAD 386          
BLAST of mRNA_M-pyrifera_M_contig83520.19512.1 vs. uniprot
Match: A0A6M8W1S6_9BACT (DNA primase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A6M8W1S6_9BACT)

HSP 1 Score: 431 bits (1109), Expect = 1.430e-145
Identity = 207/297 (69.70%), Postives = 243/297 (81.82%), Query Frame = 1
Query:    1 KAKGREYVGLCPFHDDRNPSMCVVPTKQIFHCFVCGAGGDVFSFVQKYHSMDFREALEFLAERGNIELTKFNANKQAGSAEHEHPGVGRKEIIAANESAMSYFRAILAHDEHGAIARELIERRGISQEMIERFAIGSSADRWDGLSLTIDNKKLNREAFLAAGLLKQRDNGGEYDALRNRLIFPIHDQIGRVIAFGGRKINEEDEPKYLNSPETAVFRKSTTLFGLNHAARAIKQRRTAVIVEGYTDVIACHQAGIEHVVGTLGTALTSGHATVLRRLCDTVVLLFDGDEAGQRAAD 891
            KAKGREYVGLCPFH+D NPSM VVP KQIFHCFVCG GGDVFSF+QKYH MDFREALE LAER NIELT  +A +  G   ++  G  R  +  AN  A S++RA+L H+ HG  ARELI+RRGIS EM+E+F IG++ DRWDGL   ID+ + +RE F+ AGLLK RD+G  YDALR+RLIFPI DQIGRVIAFGGR+IN++D+PKYLNSPET +F KS+++FGL  AARAI+  RTA+I EGYTDVIACHQAGIEH V TLGTALT GHA++LRR+CDTVVLLFDGD+AGQRAAD
Sbjct:   31 KAKGREYVGLCPFHEDHNPSMAVVPAKQIFHCFVCGTGGDVFSFIQKYHRMDFREALEHLAERCNIELTPRHAPQ--GGQPNQSGGFSRSTLADANAQAASFYRAVLQHETHGRAARELIDRRGISPEMVEKFTIGAAPDRWDGLCQKIDSMEADRELFMQAGLLKPRDDGSHYDALRHRLIFPIRDQIGRVIAFGGRRINDDDDPKYLNSPETPLFNKSSSIFGLFQAARAIQHERTAIITEGYTDVIACHQAGIEHAVATLGTALTPGHASILRRMCDTVVLLFDGDDAGQRAAD 325          
BLAST of mRNA_M-pyrifera_M_contig83520.19512.1 vs. uniprot
Match: A0A812XVT6_9DINO (RpoD protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812XVT6_9DINO)

HSP 1 Score: 432 bits (1111), Expect = 3.200e-140
Identity = 206/277 (74.37%), Postives = 237/277 (85.56%), Query Frame = 1
Query:   61 MCVVPTKQIFHCFVCGAGGDVFSFVQKYHSMDFREALEFLAERGNIELTKFNANKQAGSAEHEHPGVGRKEIIAANESAMSYFRAILAHDEHGAIARELIERRGISQEMIERFAIGSSADRWDGLSLTIDNKKLNREAFLAAGLLKQRDNGGEYDALRNRLIFPIHDQIGRVIAFGGRKINEEDEPKYLNSPETAVFRKSTTLFGLNHAARAIKQRRTAVIVEGYTDVIACHQAGIEHVVGTLGTALTSGHATVLRRLCDTVVLLFDGDEAGQRAAD 891
            MCVVPTKQIFHCFVCGAGGDVF+FVQ+YHSMDFRE+L+FLAER NIELT FN ++ + S   +  G+ +++I+ ANE A SYFRA+L H EHG  AR+LIERRGI+ +M+ERF IG SADRWDGL +TI++K  N  AF  AGLLK RDNGG+YDALRNRLIFPI DQIGRVI FGGR+IN+ED+PKYLNSPET  F KS TL+GLN+A RAIK+ R AV+VEGYTDVIACHQ G+EHVVGTLGTALT GHAT+LRRLCDTVVLLFDGDEAGQRAAD
Sbjct:    1 MCVVPTKQIFHCFVCGAGGDVFTFVQRYHSMDFRESLQFLAERANIELTPFNPSRSSNSDTQQSSGLSKQDIMNANEQAQSYFRALLTHPEHGQTARDLIERRGINADMVERFGIGVSADRWDGLLMTIESKGYNPRAFSEAGLLKTRDNGGQYDALRNRLIFPICDQIGRVIGFGGRRINDEDDPKYLNSPETVAFNKSRTLYGLNNAQRAIKRERVAVVVEGYTDVIACHQHGVEHVVGTLGTALTKGHATILRRLCDTVVLLFDGDEAGQRAAD 277          
BLAST of mRNA_M-pyrifera_M_contig83520.19512.1 vs. uniprot
Match: A0A3B1DSP4_9ZZZZ (DNA primase n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B1DSP4_9ZZZZ)

HSP 1 Score: 417 bits (1071), Expect = 1.190e-139
Identity = 204/305 (66.89%), Postives = 242/305 (79.34%), Query Frame = 1
Query:    1 KAKGREYVGLCPFHDDRNPSMCVVPTKQIFHCFVCGAGGDVFSFVQKYHSMDFREALEFLAERGNIELTKFNANK---QAGSAEHEHPGVG-----RKEIIAANESAMSYFRAILAHDEHGAIARELIERRGISQEMIERFAIGSSADRWDGLSLTIDNKKLNREAFLAAGLLKQRDNGGEYDALRNRLIFPIHDQIGRVIAFGGRKINEEDEPKYLNSPETAVFRKSTTLFGLNHAARAIKQRRTAVIVEGYTDVIACHQAGIEHVVGTLGTALTSGHATVLRRLCDTVVLLFDGDEAGQRAAD 891
            KAKGRE+VGLCPFHDD  PSMCVVP KQIFHCFVCGAGGDVFSF+++YH M+FREALE+LAER NI LTK +A +   Q G A  E+ GV      R ++  AN  A S+FRA+L H++HG IARE+IERRGIS EM+ERF +G++ DRWDGL++ +D    +RE F AAGLLK R+ GG +D  RNRL+FPI DQIGRVIAFGGR I+EED PKYLNSP++ +F KS  +FGL+ A +AI++ RT +I EGYTDVIACHQAGIEH V TLGTALT GHAT+LRRLCDTVVLLFDGD AG  AAD
Sbjct:   31 KAKGREFVGLCPFHDDHKPSMCVVPHKQIFHCFVCGAGGDVFSFIERYHRMEFREALEYLAERCNITLTKRSAQRTDAQTGDAISEY-GVSESRATRGQLAEANAQAASFFRAVLNHEDHGKIAREIIERRGISPEMVERFTLGAAPDRWDGLAMKVDAMGQDRELFAAAGLLKARETGGHFDFFRNRLMFPIRDQIGRVIAFGGRIIDEEDTPKYLNSPDSPLFHKSAAIFGLHQAVQAIQRERTVIITEGYTDVIACHQAGIEHAVATLGTALTPGHATILRRLCDTVVLLFDGDAAGLMAAD 334          
BLAST of mRNA_M-pyrifera_M_contig83520.19512.1 vs. uniprot
Match: A0A7C3KBB1_9BACT (DNA primase n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7C3KBB1_9BACT)

HSP 1 Score: 388 bits (997), Expect = 1.640e-128
Identity = 189/297 (63.64%), Postives = 224/297 (75.42%), Query Frame = 1
Query:    1 KAKGREYVGLCPFHDDRNPSMCVVPTKQIFHCFVCGAGGDVFSFVQKYHSMDFREALEFLAERGNIELTKFNANKQAGSAEHEHPGVGRKEIIAANESAMSYFRAILAHDEHGAIARELIERRGISQEMIERFAIGSSADRWDGLSLTIDNKKLNREAFLAAGLLKQRDNGGEYDALRNRLIFPIHDQIGRVIAFGGRKINEEDEPKYLNSPETAVFRKSTTLFGLNHAARAIKQRRTAVIVEGYTDVIACHQAGIEHVVGTLGTALTSGHATVLRRLCDTVVLLFDGDEAGQRAAD 891
            +AKGRE+V LCPFHDD  PSM VVP KQI+HCF CGAGG+   F+ +YH M + E+L  LAER  IELT +   +    +  E     R++I +AN  A S+FR++L H EHG  AREL+ RRGIS EM+E F IG++ DRWDGL  TI+ K+L    F+AAGL+K R+ GG YDALRNRLIF IHDQ+GR IAFGGR+IN+EDEPKYLNSPETA+F KS+TLF L  A RAI+Q RTAVI EGYTD IACHQAGI +VV TLGTALT  HA++LRR CD VVLLFD DEAGQ AAD
Sbjct:   37 RAKGREFVCLCPFHDDHTPSMYVVPHKQIYHCFACGAGGNAIDFMMRYHGMTYPESLRHLAERAGIELTPYRGRRSEDGSREEGEA-SREDIASANGMAQSFFRSVLNHAEHGRAARELLARRGISPEMVEEFGIGAAPDRWDGLVRTIEAKRLPIAPFVAAGLVKAREGGGYYDALRNRLIFTIHDQVGRAIAFGGRRINDEDEPKYLNSPETALFHKSSTLFALKQAYRAIQQERTAVITEGYTDAIACHQAGIRNVVATLGTALTERHASILRRFCDCVVLLFDSDEAGQLAAD 332          
BLAST of mRNA_M-pyrifera_M_contig83520.19512.1 vs. uniprot
Match: A0A6N2ELX0_9BACT (DNA primase n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A6N2ELX0_9BACT)

HSP 1 Score: 390 bits (1001), Expect = 1.300e-127
Identity = 189/297 (63.64%), Postives = 230/297 (77.44%), Query Frame = 1
Query:    1 KAKGREYVGLCPFHDDRNPSMCVVPTKQIFHCFVCGAGGDVFSFVQKYHSMDFREALEFLAERGNIELTKFNANKQAGSAEHEHPGVGRKEIIAANESAMSYFRAILAHDEHGAIARELIERRGISQEMIERFAIGSSADRWDGLSLTIDNKKLNREAFLAAGLLKQRDNGGEYDALRNRLIFPIHDQIGRVIAFGGRKINEEDEPKYLNSPETAVFRKSTTLFGLNHAARAIKQRRTAVIVEGYTDVIACHQAGIEHVVGTLGTALTSGHATVLRRLCDTVVLLFDGDEAGQRAAD 891
            K KGRE+V LCPFHDD NPSM VVP KQIF+CFVCGA GDVF+FV+K+HSM+FREALEFLAER  IELT+   NKQ      ++ G GR EII AN++A  +F +     E    ARE+ + RGIS EMIE+F +G+S DRWDGL LT+  K +  +  +AAGL++Q+D G  +D  RNRL+FPIHDQ+GRV+AFG RKINEEDEPKYLNSP++ VF KS+TL+GL+ AA AI+Q R A++ EGYTDVIACHQAG E+ + TLGTALT GHA +LRRLCD V+LLFD DEAG RAAD
Sbjct:  169 KPKGREFVCLCPFHDDHNPSMYVVPHKQIFNCFVCGAAGDVFTFVEKFHSMNFREALEFLAERAGIELTRTGINKQ------QNAGPGRAEIIGANDAACEFFCSYFHKHEGARRAREIAQGRGISPEMIEKFRLGASPDRWDGLLLTLGRKGIPVDHLVAAGLVRQKDGGKTFDNFRNRLMFPIHDQVGRVVAFGARKINEEDEPKYLNSPDSVVFDKSSTLYGLHQAAPAIRQSRVAIVTEGYTDVIACHQAGFENAIATLGTALTPGHAKILRRLCDAVILLFDADEAGLRAAD 459          
BLAST of mRNA_M-pyrifera_M_contig83520.19512.1 vs. uniprot
Match: A0A5Q4ESJ7_9BACT (DNA primase n=1 Tax=Phycisphaeraceae bacterium TaxID=2026777 RepID=A0A5Q4ESJ7_9BACT)

HSP 1 Score: 385 bits (988), Expect = 3.610e-127
Identity = 183/298 (61.41%), Postives = 229/298 (76.85%), Query Frame = 1
Query:    1 KAKGREYVGLCPFHDDRNPSMCVVPTKQIFHCFVCGAGGDVFSFVQKYHSMDFREALEFLAERGNIELT-KFNANKQAGSAEHEHPGVGRKEIIAANESAMSYFRAILAHDEHGAIARELIERRGISQEMIERFAIGSSADRWDGLSLTIDNKKLNREAFLAAGLLKQRDNGGEYDALRNRLIFPIHDQIGRVIAFGGRKINEEDEPKYLNSPETAVFRKSTTLFGLNHAARAIKQRRTAVIVEGYTDVIACHQAGIEHVVGTLGTALTSGHATVLRRLCDTVVLLFDGDEAGQRAAD 891
            + KGREYV LCPFHDD  PSMCVVP KQI+HCF CGAGG+   FV  YH M+F +AL FLA+R  +ELT +  ++   G+ + + P   R ++I AN +A+ +FR IL H EHGA AR +IERRG+S EM+E F +G++ DRWDGL  TI++K L    F  AGLLK R+ GG YDALRNRL+FPIHDQIGR IAFG R+I++EDEPKYLNSPE+ +F KS+TL+GL+ A RAI+  RTA++ EGYTDVIACHQAGI +VV TLGTALT+ HA +LRR+CD V+LLFD D+AG +AAD
Sbjct:   41 RPKGREYVCLCPFHDDHKPSMCVVPHKQIYHCFSCGAGGNSIDFVMNYHKMEFMDALRFLADRAGVELTPRKRSDAGEGAEQSDAPAASRADLIRANSTALGFFRTILRHAEHGASARGVIERRGVSPEMVELFQLGAAPDRWDGLLKTIESKCLPTGWFEQAGLLKPRETGGLYDALRNRLVFPIHDQIGRPIAFGARRIDDEDEPKYLNSPESTLFDKSSTLYGLHQAHRAIQNERTAIVTEGYTDVIACHQAGIHNVVATLGTALTTRHAPILRRVCDQVILLFDADDAGAKAAD 338          
BLAST of mRNA_M-pyrifera_M_contig83520.19512.1 vs. uniprot
Match: A0A7V1M1T4_9BACT (DNA primase n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7V1M1T4_9BACT)

HSP 1 Score: 386 bits (991), Expect = 1.450e-126
Identity = 190/300 (63.33%), Postives = 231/300 (77.00%), Query Frame = 1
Query:    1 KAKGREYVGLCPFHDDRNPSMCVVPTKQIFHCFVCGAGGDVFSFVQKYHSMDFREALEFLAERGNIELTKFNANKQAGSAEHEHPGVGRKEIIAANESAMSYFRAILAHDEHGAIARELIERRGISQEMIERFAIGSSADRWDGLSLTIDNKKLNREAFLAAGLLKQRDN---GGEYDALRNRLIFPIHDQIGRVIAFGGRKINEEDEPKYLNSPETAVFRKSTTLFGLNHAARAIKQRRTAVIVEGYTDVIACHQAGIEHVVGTLGTALTSGHATVLRRLCDTVVLLFDGDEAGQRAAD 891
            KA+GREYVGLCPFHDD  PSM VVP KQ++HCF CGAGGD+F+FVQ YHSM FREAL++LAER  I L      + A  +      V R  ++ ANE A  ++R+I  H EHG  AREL+E+RGIS EM+E F IG++  RWDGL + + +K+   E +L AGL+K RD+   GG +DALR+RL+FPI DQIGRVIAFGGR+IN+EDEPKYLNSPE+ VF KS TLFGL+ A+R+I++   A+I EGYTDVIACHQAGI +VV TLGTALT  HAT+LRRLC TVVLLFDGD+AGQRAAD
Sbjct:  129 KARGREYVGLCPFHDDTKPSMYVVPAKQMYHCFSCGAGGDIFTFVQDYHSMTFREALKYLAERAGISLQSRGRRRTASDSALS---VSRSVLLEANEVAQKFYRSIYRHAEHGKAARELVEQRGISPEMVEAFGIGAAPQRWDGLVVFLSSKQRTLEPYLQAGLIKARDHSTEGGFFDALRHRLVFPIRDQIGRVIAFGGRRINDEDEPKYLNSPESPVFDKSATLFGLDLASRSIQREGVAIIAEGYTDVIACHQAGITNVVATLGTALTPKHATLLRRLCHTVVLLFDGDQAGQRAAD 425          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig83520.19512.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2D9C6A8_9BACT2.940e-16278.67DNA primase n=2 Tax=Phycisphaerae TaxID=666505 Rep... [more]
A0A2A4RFA8_9BACT5.500e-16174.75DNA primase n=1 Tax=bacterium TaxID=1869227 RepID=... [more]
A0A3M2CQP6_9BACT2.330e-15674.50DNA primase n=1 Tax=Planctomycetes bacterium TaxID... [more]
A0A6M8W1S6_9BACT1.430e-14569.70DNA primase n=1 Tax=Planctomycetes bacterium TaxID... [more]
A0A812XVT6_9DINO3.200e-14074.37RpoD protein n=1 Tax=Symbiodinium sp. CCMP2592 Tax... [more]
A0A3B1DSP4_9ZZZZ1.190e-13966.89DNA primase n=1 Tax=hydrothermal vent metagenome T... [more]
A0A7C3KBB1_9BACT1.640e-12863.64DNA primase n=1 Tax=Phycisphaerales bacterium TaxI... [more]
A0A6N2ELX0_9BACT1.300e-12763.64DNA primase n=1 Tax=Phycisphaerales bacterium TaxI... [more]
A0A5Q4ESJ7_9BACT3.610e-12761.41DNA primase n=1 Tax=Phycisphaeraceae bacterium Tax... [more]
A0A7V1M1T4_9BACT1.450e-12663.33DNA primase n=1 Tax=Phycisphaerales bacterium TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig83520contigM-pyrifera_M_contig83520:2..892 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score335.1
Seed ortholog evalue3.3e-89
Seed eggNOG ortholog1142394.PSMK_08510
Preferred namednaG
KEGG koko:K02316
KEGG Pathwayko03030,map03030
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044464,GO:0071944
EggNOG free text desc.RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
EggNOG OGs2IXQ4@203682,COG0358@1,COG0358@2
COG Functional cat.L
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03032
Exons1
Model size891
Cds size891
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816742.777389-CDS-M-pyrifera_M_contig83520:1..8921622816742.777389-CDS-M-pyrifera_M_contig83520:1..892Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig83520 2..892 -
1692278151.6343493-CDS-M-pyrifera_M_contig83520:1..8921692278151.6343493-CDS-M-pyrifera_M_contig83520:1..892Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig83520 2..892 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig83520.19512.1prot_M-pyrifera_M_contig83520.19512.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig83520 2..892 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig83520.19512.1

>prot_M-pyrifera_M_contig83520.19512.1 ID=prot_M-pyrifera_M_contig83520.19512.1|Name=mRNA_M-pyrifera_M_contig83520.19512.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=297bp
KAKGREYVGLCPFHDDRNPSMCVVPTKQIFHCFVCGAGGDVFSFVQKYHS
MDFREALEFLAERGNIELTKFNANKQAGSAEHEHPGVGRKEIIAANESAM
SYFRAILAHDEHGAIARELIERRGISQEMIERFAIGSSADRWDGLSLTID
NKKLNREAFLAAGLLKQRDNGGEYDALRNRLIFPIHDQIGRVIAFGGRKI
NEEDEPKYLNSPETAVFRKSTTLFGLNHAARAIKQRRTAVIVEGYTDVIA
CHQAGIEHVVGTLGTALTSGHATVLRRLCDTVVLLFDGDEAGQRAAD
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mRNA from alignment at M-pyrifera_M_contig83520:2..892-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig83520.19512.1 ID=mRNA_M-pyrifera_M_contig83520.19512.1|Name=mRNA_M-pyrifera_M_contig83520.19512.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=891bp|location=Sequence derived from alignment at M-pyrifera_M_contig83520:2..892- (Macrocystis pyrifera P11B4 male)
AAAGCGAAGGGACGCGAGTATGTGGGATTGTGTCCTTTCCACGACGATCG GAATCCCTCGATGTGTGTCGTGCCGACGAAGCAGATCTTTCATTGCTTTG TCTGCGGCGCGGGAGGGGATGTGTTCAGCTTCGTCCAGAAGTATCACTCG ATGGATTTCCGCGAGGCGCTTGAGTTCCTCGCAGAACGCGGGAACATCGA GCTGACGAAGTTCAATGCGAACAAACAAGCTGGATCTGCAGAGCACGAGC ATCCAGGAGTCGGACGCAAGGAGATCATCGCAGCGAACGAATCTGCGATG AGCTATTTTCGCGCGATCCTCGCGCACGACGAGCACGGCGCAATCGCACG CGAGCTGATCGAGCGGCGCGGGATCTCCCAAGAAATGATCGAGCGTTTCG CGATCGGCTCATCTGCTGATCGCTGGGACGGACTCTCCCTCACGATCGAC AATAAGAAGCTCAATCGCGAAGCGTTCCTCGCAGCAGGGCTCCTCAAACA ACGCGACAACGGCGGCGAGTACGACGCACTGCGCAATCGTTTGATCTTCC CGATCCATGATCAGATCGGACGCGTGATCGCGTTCGGGGGACGCAAGATC AACGAAGAGGACGAACCCAAGTATCTCAACTCCCCTGAGACAGCGGTGTT CCGAAAGTCGACGACACTGTTCGGACTCAATCACGCGGCGCGTGCGATTA AGCAGCGCCGCACGGCCGTCATCGTCGAAGGCTACACAGATGTGATCGCG TGTCATCAAGCAGGAATCGAGCATGTCGTCGGCACGCTCGGCACAGCACT CACGAGCGGACACGCAACAGTTCTTCGTAGATTGTGCGACACAGTCGTGC TGCTTTTCGACGGCGACGAAGCAGGACAACGCGCCGCAGAT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig83520:2..892-

>mRNA_M-pyrifera_M_contig83520.19512.1 ID=mRNA_M-pyrifera_M_contig83520.19512.1|Name=mRNA_M-pyrifera_M_contig83520.19512.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1782bp|location=Sequence derived from alignment at M-pyrifera_M_contig83520:2..892- (Macrocystis pyrifera P11B4 male)
AAAGCGAAGGGACGCGAGTATGTGGGATTGTGTCCTTTCCACGACGATCG
GAATCCCTCGATGTGTGTCGTGCCGACGAAGCAGATCTTTCATTGCTTTG
TCTGCGGCGCGGGAGGGGATGTGTTCAGCTTCGTCCAGAAGTATCACTCG
ATGGATTTCCGCGAGGCGCTTGAGTTCCTCGCAGAACGCGGGAACATCGA
GCTGACGAAGTTCAATGCGAACAAACAAGCTGGATCTGCAGAGCACGAGC
ATCCAGGAGTCGGACGCAAGGAGATCATCGCAGCGAACGAATCTGCGATG
AGCTATTTTCGCGCGATCCTCGCGCACGACGAGCACGGCGCAATCGCACG
CGAGCTGATCGAGCGGCGCGGGATCTCCCAAGAAATGATCGAGCGTTTCG
CGATCGGCTCATCTGCTGATCGCTGGGACGGACTCTCCCTCACGATCGAC
AATAAGAAGCTCAATCGCGAAGCGTTCCTCGCAGCAGGGCTCCTCAAACA
ACGCGACAACGGCGGCGAGTACGACGCACTGCGCAATCGTTTGATCTTCC
CGATCCATGATCAGATCGGACGCGTGATCGCGTTCGGGGGACGCAAGATC
AACGAAGAGGACGAACCCAAGTATCTCAACTCCCCTGAGACAGCGGTGTT
CCGAAAGTCGACGACACTGTTCGGACTCAATCACGCGGCGCGTGCGATTA
AGCAGCGCCGCACGGCCGTCATCGTCGAAGGCTACACAGATGTGATCGCG
TGTCATCAAGCAGGAATCGAGCATGTCGTCGGCACGCTCGGCACAGCACT
CACGAGCGGACACGCAACAGTTCTTCGTAGATTGTGCGACACAGTCGTGC
TGCTTTTCGACGGCGACGAAGCAGGACAACGCGCCGCAGATAAAGCGAAG
GGACGCGAGTATGTGGGATTGTGTCCTTTCCACGACGATCGGAATCCCTC
GATGTGTGTCGTGCCGACGAAGCAGATCTTTCATTGCTTTGTCTGCGGCG
CGGGAGGGGATGTGTTCAGCTTCGTCCAGAAGTATCACTCGATGGATTTC
CGCGAGGCGCTTGAGTTCCTCGCAGAACGCGGGAACATCGAGCTGACGAA
GTTCAATGCGAACAAACAAGCTGGATCTGCAGAGCACGAGCATCCAGGAG
TCGGACGCAAGGAGATCATCGCAGCGAACGAATCTGCGATGAGCTATTTT
CGCGCGATCCTCGCGCACGACGAGCACGGCGCAATCGCACGCGAGCTGAT
CGAGCGGCGCGGGATCTCCCAAGAAATGATCGAGCGTTTCGCGATCGGCT
CATCTGCTGATCGCTGGGACGGACTCTCCCTCACGATCGACAATAAGAAG
CTCAATCGCGAAGCGTTCCTCGCAGCAGGGCTCCTCAAACAACGCGACAA
CGGCGGCGAGTACGACGCACTGCGCAATCGTTTGATCTTCCCGATCCATG
ATCAGATCGGACGCGTGATCGCGTTCGGGGGACGCAAGATCAACGAAGAG
GACGAACCCAAGTATCTCAACTCCCCTGAGACAGCGGTGTTCCGAAAGTC
GACGACACTGTTCGGACTCAATCACGCGGCGCGTGCGATTAAGCAGCGCC
GCACGGCCGTCATCGTCGAAGGCTACACAGATGTGATCGCGTGTCATCAA
GCAGGAATCGAGCATGTCGTCGGCACGCTCGGCACAGCACTCACGAGCGG
ACACGCAACAGTTCTTCGTAGATTGTGCGACACAGTCGTGCTGCTTTTCG
ACGGCGACGAAGCAGGACAACGCGCCGCAGAT
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