mRNA_M-pyrifera_M_contig83356.19465.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig83356.19465.1
Unique NamemRNA_M-pyrifera_M_contig83356.19465.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig83356.19465.1 vs. uniprot
Match: A0A2B4RKT2_STYPI (Glutathione s-transferase kappa 2 n=3 Tax=Pocilloporidae TaxID=46729 RepID=A0A2B4RKT2_STYPI)

HSP 1 Score: 198 bits (503), Expect = 1.880e-58
Identity = 109/269 (40.52%), Postives = 157/269 (58.36%), Query Frame = 1
Query:    1 SFIVNGKLFWGIDRMHFVEQELGNRLASLPRLLLQAQADVQPGQV-VRFTFDFSSPWAYLASTQIERVVAESGAARVLLAWNPILLGALFRDVGTPNMPMLALSEAKRAYSGQDLQDWCSFYGNVPLRFPDTFPLRTVLPLRLTLFYMHHSIETERGEVAKLIHTLFAATWQHNVDIGKPEPLAAFLLLSPGRLVLQAGLQRNLDTFEALTSLLEEANSCSLAKSGLRRRTEAAVHDGCCGVPSFQINGGPVLWGQDRFHYLQDALCGW 804
            SF VN +LF+G+D +HFVE+ LGN+ A+ PR         +P +  +    DFSSPW+Y+ STQI ++VAE     V + W PI +GALF+ +GTP +PM  +SEAKR Y  +DLQ+W  ++G +  +F   FP R++LPLR+TL               +L  T++ A W+++ DIG P+ L++ L         +AG        EALT+  ++       K  LR+ T+ A   G CGVPS+Q+N G VLWGQDR + + D LCGW
Sbjct:   81 SFWVNNELFFGVDHLHFVERALGNKSAAPPRF---HPNPTEPRKAKLTIYHDFSSPWSYIGSTQIAKLVAEVHPVSVEVEWVPISVGALFKMIGTPVVPMQTISEAKREYGSKDLQEWAKYHG-IQFQFTSHFPFRSILPLRVTLV----------NPDDRLRQTMYEAGWRYDRDIGDPKVLSSVLT--------EAGFDG-----EALTAATQDQQ----IKDQLRKNTDRAFATGLCGVPSYQVNNGSVLWGQDRLNVIADLLCGW 318          
BLAST of mRNA_M-pyrifera_M_contig83356.19465.1 vs. uniprot
Match: UPI00106911DC (uncharacterized protein LOC114526489 isoform X1 n=2 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106911DC)

HSP 1 Score: 194 bits (493), Expect = 6.890e-56
Identity = 106/268 (39.55%), Postives = 157/268 (58.58%), Query Frame = 1
Query:    1 SFIVNGKLFWGIDRMHFVEQELGNRLASLPRLLLQAQADVQPGQVVRFTFDFSSPWAYLASTQIERVVAESGAARVLLAWNPILLGALFRDVGTPNMPMLALSEAKRAYSGQDLQDWCSFYGNVPLRFPDTFPLRTVLPLRLTLFYMHHSIETERGEVAKLIHTLFAATWQHNVDIGKPEPLAAFLLLSPGRLVLQAGLQRNLDTFEALTSLLEEANSCSLAKSGLRRRTEAAVHDGCCGVPSFQINGGPVLWGQDRFHYLQDALCGW 804
            SF+VN KLFWG+D MHFVE+ELGN  A+ P  L+Q  +  Q    +   +D SSPW+++ STQI  +++      + + + PI++G+LF+ +GTP +PM  LS AK AY  + L DWC ++G    RFP  FPLRTVLP+R+ L        ++  +  +L+  L+ A W  + +IG  E +   +L S G              ++A   LL +A+   + K  LR  T+ A+  G CGVPS+Q++GG V+WGQDR + + D LCGW
Sbjct:  174 SFLVNEKLFWGVDSMHFVEKELGNVNAA-PLRLVQPPSS-QHSATLTIYYDLSSPWSFIGSTQIANLISSLKPVNIKVEYVPIVVGSLFKQIGTPVVPMRHLSPAKLAYLTKSLHDWCDYHGITGFRFPSNFPLRTVLPMRVLL-------ASDDSDRERLLAILYKAAWVDDKNIGDEE-IVREILQSAG--------------YDA-DELLNKAHRQDI-KDQLRANTDRAISVGVCGVPSYQVDGGAVIWGQDRLNIVADLLCGW 415          
BLAST of mRNA_M-pyrifera_M_contig83356.19465.1 vs. uniprot
Match: UPI001F03DAC9 (uncharacterized protein LOC124446716 n=3 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F03DAC9)

HSP 1 Score: 190 bits (482), Expect = 3.710e-54
Identity = 106/270 (39.26%), Postives = 146/270 (54.07%), Query Frame = 1
Query:    1 SFIVNGKLFWGIDRMHFVEQELGNRLASLPRLLLQAQADVQPGQVVRFTF--DFSSPWAYLASTQIERVVAESGAARVLLAWNPILLGALFRDVGTPNMPMLALSEAKRAYSGQDLQDWCSFYGNVPLRFPDTFPLRTVLPLRLTLFYMHHSIETERGEVAKLIHTLFAATWQHNVDIGKPEPLAAFLLLSPGRLVLQAGLQRNLDTFEALTSLLEEANSCSLAKSGLRRRTEAAVHDGCCGVPSFQINGGPVLWGQDRFHYLQDALCGW 804
            SF+VNGKLFWG+D +HFVE+ELG + AS PRL    +      Q V  T   D  SPW++L STQ+E ++       V +   PI++G+LF+ +GTP +PM   S AK  Y  + L DWC+F+G    +FP  FPL+TVLP+RL L   + S         +L   L+ A W  + DIG  E L   L         + G   +         + + A    + K  LR  T+ AV  G CGVPS+Q+N G ++WGQDR + + D LCGW
Sbjct:  185 SFLVNGKLFWGVDNLHFVERELGGKSASPPRLTEPPKTP----QSVNLTIYHDLGSPWSFLGSTQVENLIKVVKPVNVTIESLPIVVGSLFKQIGTPVVPMRHFSAAKLTYLTKSLNDWCTFHGIKGFKFPSNFPLKTVLPMRLLLASRNDS---------ELQAALYKAAWIEDKDIGDVEVLREILH--------KVGFDAD--------KMFDNAQQQDI-KDQLRANTDRAVKAGVCGVPSYQVNNGAIIWGQDRLNIVADLLCGW 424          
BLAST of mRNA_M-pyrifera_M_contig83356.19465.1 vs. uniprot
Match: UPI000A2A4E68 (uncharacterized protein LOC110242008 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A4E68)

HSP 1 Score: 189 bits (479), Expect = 8.790e-54
Identity = 102/268 (38.06%), Postives = 152/268 (56.72%), Query Frame = 1
Query:    1 SFIVNGKLFWGIDRMHFVEQELGNRLASLPRLLLQAQADVQPGQVVRFTFDFSSPWAYLASTQIERVVAESGAARVLLAWNPILLGALFRDVGTPNMPMLALSEAKRAYSGQDLQDWCSFYGNVPLRFPDTFPLRTVLPLRLTLFYMHHSIETERGEVAKLIHTLFAATWQHNVDIGKPEPLAAFLLLSPGRLVLQAGLQRNLDTFEALTSLLEEANSCSLAKSGLRRRTEAAVHDGCCGVPSFQINGGPVLWGQDRFHYLQDALCGW 804
            SF VNGKL++G+DR+HF+E+ELGN +A+  RL   + +  +  ++  F +DF+SPWAY+ STQI +++A      V + W PIL+G LF+ +GTP +P  ++SEAKR Y  +DL+DW  + G +   +   FPL+TV   R+ +F          G+  +L  T++ A W+ N+DI   + L   L               N   F A    L +       K  LR  T+ A+  G CGVPS+Q+NGG +LWGQDR + + D +CGW
Sbjct:  176 SFWVNGKLYYGVDRLHFLEKELGNTMAAPLRLASPSPSSPRKAKLTIF-YDFASPWAYIGSTQIPKLLASVSPIEVEVEWVPILVGVLFKSIGTPMIPAQSMSEAKRNYGMKDLKDWTKYLG-IQFXWTSHFPLKTVPASRICIF---------DGD-DRLRQTIYEAAWRDNMDISDKDVLRDVL---------------NKAGFNA--DRLIQGTQSQNXKDKLRSNTQRAIDSGVCGVPSYQVNGGAILWGQDRLNVVADMICGW 414          
BLAST of mRNA_M-pyrifera_M_contig83356.19465.1 vs. uniprot
Match: A0A1X7TMV5_AMPQE (Uncharacterized protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7TMV5_AMPQE)

HSP 1 Score: 185 bits (470), Expect = 1.680e-52
Identity = 110/269 (40.89%), Postives = 149/269 (55.39%), Query Frame = 1
Query:    1 SFIVNGKLFWGIDRMHFVEQELGNRLASLPRLLLQAQADVQPGQV-VRFTFDFSSPWAYLASTQIERVVAESGAARVLLAWNPILLGALFRDVGTPNMPMLALSEAKRAYSGQDLQDWCSFYGNVPLRFPDTFPLRTVLPLRLTLFYMHHSIETERGEVAKLIHTLFAATWQHNVDIGKPEPLAAFLLLSPGRLVLQAGLQRNLDTFEALTSLLEEANSCSLAKSGLRRRTEAAVHDGCCGVPSFQINGGPVLWGQDRFHYLQDALCGW 804
            S+ V  +LFWG+DR+HFVE+ LG + A   RL   A      G   + F FD+SSPW YL + Q+ R V       V + + PILLGALF  +GTP +P+ A++ AK+ Y   +LQ +     NVP ++PD FPLR+VLPLR+TL                LI  L+ A W+ N +I  P+             +L   L+ N   F A + LL+ A S  + K  L   TE AV +G CGVP+F++N GP+LWGQDR H + D LCGW
Sbjct:  176 SYYVKDQLFWGVDRLHFVERLLGKKDAGPERL---AYPSPNGGTADLTFFFDYSSPWGYLGNEQLGRTVQSVSPVSVHIHYVPILLGALFNKIGTPVVPLQAMAPAKQRYYAMELQHFAK-EANVPFQYPDFFPLRSVLPLRVTL---------AANNDPSLIDILYRAVWRDNKNISDPQ-------------ILSLILEEN--GFPA-SQLLQAAQSQPI-KDQLFANTEKAVSEGVCGVPTFRVNDGPLLWGQDRLHVVADMLCGW 414          
BLAST of mRNA_M-pyrifera_M_contig83356.19465.1 vs. uniprot
Match: A0A6P8HPE5_ACTTE (uncharacterized protein LOC116294112 isoform X1 n=4 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8HPE5_ACTTE)

HSP 1 Score: 184 bits (467), Expect = 4.790e-52
Identity = 109/269 (40.52%), Postives = 152/269 (56.51%), Query Frame = 1
Query:    1 SFIVNGKLFWGIDRMHFVEQELGNRLASLPRLLLQAQADVQPGQV-VRFTFDFSSPWAYLASTQIERVVAESGAARVLLAWNPILLGALFRDVGTPNMPMLALSEAKRAYSGQDLQDWCSFYGNVPLRFPDTFPLRTVLPLRLTLFYMHHSIETERGEVAKLIHTLFAATWQHNVDIGKPEPLAAFLLLSPGRLVLQAGLQRNLDTFEALTSLLEEANSCSLAKSGLRRRTEAAVHDGCCGVPSFQINGGPVLWGQDRFHYLQDALCGW 804
            SF VN KL +G+D +H +E ELGN  A+  RL   A     P    +    DF+SPW+YL STQI +++      +V + W PI+LGALF+ +GTP +PM A+SEAKR Y  QDL+DW   Y  V L +   FPLRT+LPLR++L           G+  +L   ++ A W+++ +IG+ + L   LL         AG   +         L+E+     + K  LR  TE AV +G CGVPS+Q+N G +LWGQDR + + D LCGW
Sbjct:  176 SFWVNNKLLYGVDHLHMLEHELGNPSAAPLRL---ASPPAHPTNTKLTIYHDFASPWSYLGSTQITQLLKSVYPVQVEVEWVPIVLGALFKTIGTPVVPMQAVSEAKRNYGVQDLKDWLK-YKKVELNWTSHFPLRTILPLRVSLV---------DGD-DRLRQVIYEAGWRYDKNIGEKKVLREVLL--------DAGFNAD--------HLIEQTQRQDI-KDKLRANTERAVKNGVCGVPSYQVNDGAILWGQDRLNIVADLLCGW 413          
BLAST of mRNA_M-pyrifera_M_contig83356.19465.1 vs. uniprot
Match: UPI00077A96F1 (uncharacterized protein LOC107339222 n=2 Tax=Acropora TaxID=6127 RepID=UPI00077A96F1)

HSP 1 Score: 184 bits (467), Expect = 8.150e-52
Identity = 104/269 (38.66%), Postives = 156/269 (57.99%), Query Frame = 1
Query:    1 SFIVNGKLFWGIDRMHFVEQELGNRLASLPRLLLQAQADVQPGQV-VRFTFDFSSPWAYLASTQIERVVAESGAARVLLAWNPILLGALFRDVGTPNMPMLALSEAKRAYSGQDLQDWCSFYGNVPLRFPDTFPLRTVLPLRLTLFYMHHSIETERGEVAKLIHTLFAATWQHNVDIGKPEPLAAFLLLSPGRLVLQAGLQRNLDTFEALTSLLEEANSCSLAKSGLRRRTEAAVHDGCCGVPSFQINGGPVLWGQDRFHYLQDALCGW 804
            SF VN +L++G+D +HFVE+ LGN  A+ PR      A  QP +  +    DFSSPW+Y+ STQI ++++E     V + W P+++G LF+ +GTP +PM A+SE KR Y  QDL D+  ++G V  +F   FP  ++LPLR+T+     +   +R     L   ++ A W+++ +IG P+ L +        +V +AG            SL++ A +  + K  LR+ TE A   G CGVPS+Q+N G VLWGQDR + + D LCGW
Sbjct:  201 SFWVNDRLYYGVDHLHFVERALGNTSAAPPRF---HPAPAQPRKAKLTIYHDFSSPWSYIGSTQIPKLISEVHPVSVEVEWVPVVVGGLFKMIGTPVVPMNAVSEPKRKYGAQDLMDYAEYHG-VGFQFTSHFPFNSILPLRVTV-----ACPDDR-----LRQVIYEAGWKYDRNIGDPQVLTS--------VVSEAGFDGK--------SLIQAAKNQEV-KDQLRKNTERAFAAGLCGVPSYQVNDGSVLWGQDRLNIVADLLCGW 438          
BLAST of mRNA_M-pyrifera_M_contig83356.19465.1 vs. uniprot
Match: UPI00139045E3 (uncharacterized protein LOC5511679 isoform X1 n=2 Tax=Nematostella vectensis TaxID=45351 RepID=UPI00139045E3)

HSP 1 Score: 179 bits (454), Expect = 4.270e-50
Identity = 104/269 (38.66%), Postives = 148/269 (55.02%), Query Frame = 1
Query:    1 SFIVNGKLFWGIDRMHFVEQELG-NRLASLPRLLLQAQADVQPGQVVRFTFDFSSPWAYLASTQIERVVAESGAARVLLAWNPILLGALFRDVGTPNMPMLALSEAKRAYSGQDLQDWCSFYGNVPLRFPDTFPLRTVLPLRLTLFYMHHSIETERGEVAKLIHTLFAATWQHNVDIGKPEPLAAFLLLSPGRLVLQAGLQRNLDTFEALTSLLEEANSCSLAKSGLRRRTEAAVHDGCCGVPSFQINGGPVLWGQDRFHYLQDALCGW 804
            SF VN +LF+G DRMHFVE  LG ++  ++PRL        +   ++    DF+SPW+YL STQI  +V+      V + W PIL+GALF+ +GTP +PM ++ ++KR Y  +DL  + S Y +VPL++   FPLRT+LP RLT+               +L H L+ A W+++ +IG  + +   L          AG   +          L  A      K  L+  TE A+  G CGVPS+Q+N GPVLWGQDR + + D LCGW
Sbjct:  176 SFWVNNELFYGTDRMHFVESALGPDKHVTMPRLYHPPSHPTRAKLIIYH--DFASPWSYLGSTQIADLVSSLHPVSVEVEWVPILVGALFKAIGTPVVPMQSVGDSKRQYFMKDLSRY-SDYLSVPLKWTSHFPLRTILPARLTI----------ANNDDRLRHALYEAAWRYDKNIGDEQVVREILT--------NAGYDAH---------ALIAATKSPRVKDQLKANTERAIAAGACGVPSYQVNDGPVLWGQDRLNIVADMLCGW 414          
BLAST of mRNA_M-pyrifera_M_contig83356.19465.1 vs. uniprot
Match: A0A2R5G7X5_9STRA (Glutathione S-transferase kappa 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G7X5_9STRA)

HSP 1 Score: 178 bits (451), Expect = 1.080e-49
Identity = 113/264 (42.80%), Postives = 152/264 (57.58%), Query Frame = 1
Query:   22 LFWGIDRMHFVEQELG----NRLASLPRLLLQAQADVQPGQVVRFTFDFSSPWAYLASTQIERVVAESGAARVLLAWNPILLGALFRDVGTPNMPMLALSEAKRAYSGQDLQDWCSFYGNVPLRFPDTFPLRTVLPLRLTLFYMHHSIETERGEVAKLIHTLFAATWQHNVDIGKPEPLAAFLLLSPGRLVLQ-AGLQRNLDTFEALTSLLEEANSCSLAKSGLRRRTEAAVHDGCCGVPSFQI-NGGPVLWGQDRFHYLQDAL 795
            LF+G DR HF  + LG    + LA   RL    +A  +   V+ F  DFSSPW++L STQ+ R+    GA  V+    PILLGALFR++GTPN+PMLA+S  KRAY G D+QDWC+F+ NVPLRFPD FPLRTVLPLR+ +            + A   H ++ A W  N ++G  + L         R VL+ AG       F+A T L  +A+   + K  L+R T      G CGVP+FQ+ + G ++WGQDR + + D L
Sbjct:  180 LFFGNDRTHFAMRRLGVTPEHPLARPLRLQPTLRAAPKQDLVLNFYHDFSSPWSFLGSTQVFRLAEVHGARLVM---KPILLGALFREIGTPNVPMLAISSVKRAYGGLDMQDWCAFHDNVPLRFPDDFPLRTVLPLRVAI-----------ADPAVTKH-IYQAAWTQNKNVGDKDVL---------RQVLEKAG-------FDAET-LFSQADQQGI-KEQLKRNTMEFKDKGGCGVPTFQVGDAGALVWGQDRVNVVADML 410          
BLAST of mRNA_M-pyrifera_M_contig83356.19465.1 vs. uniprot
Match: A0A2F0ALS9_9DELT (Uncharacterized protein n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A2F0ALS9_9DELT)

HSP 1 Score: 177 bits (449), Expect = 1.460e-49
Identity = 110/274 (40.15%), Postives = 151/274 (55.11%), Query Frame = 1
Query:    1 SFIVNGKLFWGIDRMHFVEQELGNRLASLPRLLLQAQADVQPGQVVRFTFDFSSPWAYLASTQIERVVAESGAARVLLAWNPILLGALFRDVGTPNMPMLALSEAKRAYSGQDLQDWCSFYGNVPLRFPDTFPLRTVLPLRLTLFYMHHSIETERGEVAKLIHTLFAATWQHNVDIGKPEPLAAFLLLSPGRLVLQAGLQRNLDTFEALTSLLEEANSCSLAKSGLRRRTEAAVHDGCCGVPSFQI------NGGPVLWGQDRFHYLQDALCGW 804
            +F+++G+L+WG DR+HFVE  LG     +P L        +  ++VRF  DFSSP++YLA+TQIE+VVA  GA    L W PILLGALFR++GTP++P+  +SE KR Y   DL DW  F+G V   FP +FP+RTV PLR  L      +E        L   ++ A W     I  P  LA         ++ +AG       F+A + L +  ++    K+ LR  TE A   G CGVP+F +      +   +LWGQDR H L+ AL GW
Sbjct:  168 AFVIDGRLWWGQDRLHFVEAALGG----VPSL--SETNHTKGDRIVRFYHDFSSPFSYLAATQIEQVVAGHGAT---LQWRPILLGALFREIGTPDVPLFEMSEPKRRYMSTDLGDWAQFWG-VDFSFPSSFPIRTVQPLRAAL------VEPS------LTGAIYRAAWAEGRVIDDPAVLAD--------IIAEAG-------FDAESVLAKTTDAT--VKAALRDNTEEARQIGACGVPTFHLIHPKAEHDPLLLWGQDRIHMLERALLGW 402          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig83356.19465.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2B4RKT2_STYPI1.880e-5840.52Glutathione s-transferase kappa 2 n=3 Tax=Pocillop... [more]
UPI00106911DC6.890e-5639.55uncharacterized protein LOC114526489 isoform X1 n=... [more]
UPI001F03DAC93.710e-5439.26uncharacterized protein LOC124446716 n=3 Tax=Xenia... [more]
UPI000A2A4E688.790e-5438.06uncharacterized protein LOC110242008 n=1 Tax=Exaip... [more]
A0A1X7TMV5_AMPQE1.680e-5240.89Uncharacterized protein n=1 Tax=Amphimedon queensl... [more]
A0A6P8HPE5_ACTTE4.790e-5240.52uncharacterized protein LOC116294112 isoform X1 n=... [more]
UPI00077A96F18.150e-5238.66uncharacterized protein LOC107339222 n=2 Tax=Acrop... [more]
UPI00139045E34.270e-5038.66uncharacterized protein LOC5511679 isoform X1 n=2 ... [more]
A0A2R5G7X5_9STRA1.080e-4942.80Glutathione S-transferase kappa 1 n=1 Tax=Hondaea ... [more]
A0A2F0ALS9_9DELT1.460e-4940.15Uncharacterized protein n=1 Tax=Myxococcales bacte... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig83356contigM-pyrifera_M_contig83356:23..876 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score187.2
Seed ortholog evalue1e-44
Seed eggNOG ortholog400682.PAC_15709166
Hectar predicted targeting categoryother localisation
EggNOG free text desc.DSBA-like thioredoxin domain
EggNOG OGs2RG41@2759,38PH6@33154,3BPYY@33208,COG3917@1
COG Functional cat.Q
Best tax levelMetazoa
Best eggNOG OGNA|NA|NA
Exons2
Model size804
Cds size804
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816740.4478953-CDS-M-pyrifera_M_contig83356:22..2111622816740.4478953-CDS-M-pyrifera_M_contig83356:22..211Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig83356 23..211 +
1692278150.3690321-CDS-M-pyrifera_M_contig83356:22..2111692278150.3690321-CDS-M-pyrifera_M_contig83356:22..211Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig83356 23..211 +
1622816740.4613028-CDS-M-pyrifera_M_contig83356:261..8761622816740.4613028-CDS-M-pyrifera_M_contig83356:261..876Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig83356 262..876 +
1692278150.3800197-CDS-M-pyrifera_M_contig83356:261..8761692278150.3800197-CDS-M-pyrifera_M_contig83356:261..876Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig83356 262..876 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig83356.19465.1prot_M-pyrifera_M_contig83356.19465.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig83356 23..876 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig83356.19465.1

>prot_M-pyrifera_M_contig83356.19465.1 ID=prot_M-pyrifera_M_contig83356.19465.1|Name=mRNA_M-pyrifera_M_contig83356.19465.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=268bp
SFIVNGKLFWGIDRMHFVEQELGNRLASLPRLLLQAQADVQPGQVVRFTF
DFSSPWAYLASTQIERVVAESGAARVLLAWNPILLGALFRDVGTPNMPML
ALSEAKRAYSGQDLQDWCSFYGNVPLRFPDTFPLRTVLPLRLTLFYMHHS
IETERGEVAKLIHTLFAATWQHNVDIGKPEPLAAFLLLSPGRLVLQAGLQ
RNLDTFEALTSLLEEANSCSLAKSGLRRRTEAAVHDGCCGVPSFQINGGP
VLWGQDRFHYLQDALCGW
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mRNA from alignment at M-pyrifera_M_contig83356:23..876+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig83356.19465.1 ID=mRNA_M-pyrifera_M_contig83356.19465.1|Name=mRNA_M-pyrifera_M_contig83356.19465.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=854bp|location=Sequence derived from alignment at M-pyrifera_M_contig83356:23..876+ (Macrocystis pyrifera P11B4 male)
AGCTTCATTGTGAACGGAAAGCTCTTTTGGGGGATTGACCGAATGCACTT CGTCGAACAAGAGCTCGGCAATCGCCTCGCGTCTCTGCCCCGTCTTCTTC TCCAGGCCCAAGCAGATGTGCAGCCAGGGCAAGTTGTCAGGTTCACCTTT GACTTCAGCAGTCCCTGGGCTTACCTGGCCTCTACGCAGGTACGATAATG TTCTGTAATTGCCCACCCACCTGATCTGACGACCCCCAGATTGAGCGAGT TGTTGCTGAGAGTGGGGCGGCTCGTGTCCTGCTGGCGTGGAATCCCATCC TCCTGGGCGCGCTCTTCCGCGACGTCGGTACGCCCAATATGCCCATGCTT GCTCTCAGCGAAGCCAAGCGGGCATACAGTGGCCAGGATCTCCAAGATTG GTGCTCTTTCTATGGAAATGTGCCTCTCCGCTTCCCTGATACCTTCCCTC TCCGAACGGTGCTGCCATTGAGGCTCACGCTCTTCTATATGCACCATTCC ATCGAGACTGAGCGTGGTGAGGTGGCCAAGCTCATTCACACCTTGTTCGC AGCTACCTGGCAGCACAACGTGGACATAGGAAAGCCAGAGCCCCTCGCCG CGTTTCTGTTGCTCTCTCCTGGCCGTCTTGTCCTTCAAGCAGGACTACAG AGAAACCTTGACACCTTTGAAGCATTGACGTCTCTTCTCGAAGAAGCGAA CTCCTGCTCGCTTGCGAAGAGCGGGCTGAGGAGGCGGACCGAAGCTGCTG TTCATGACGGCTGCTGTGGCGTTCCGTCCTTCCAAATCAATGGCGGTCCG GTGCTCTGGGGGCAGGACCGATTTCACTATCTTCAAGATGCCCTTTGTGG ATGG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig83356:23..876+

>mRNA_M-pyrifera_M_contig83356.19465.1 ID=mRNA_M-pyrifera_M_contig83356.19465.1|Name=mRNA_M-pyrifera_M_contig83356.19465.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1608bp|location=Sequence derived from alignment at M-pyrifera_M_contig83356:23..876+ (Macrocystis pyrifera P11B4 male)
AGCTTCATTGTGAACGGAAAGCTCTTTTGGGGGATTGACCGAATGCACTT
CGTCGAACAAGAGCTCGGCAATCGCCTCGCGTCTCTGCCCCGTCTTCTTC
TCCAGGCCCAAGCAGATGTGCAGCCAGGGCAAGTTGTCAGGTTCACCTTT
GACTTCAGCAGTCCCTGGGCTTACCTGGCCTCTACGCAGAGCTTCATTGT
GAACGGAAAGCTCTTTTGGGGGATTGACCGAATGCACTTCGTCGAACAAG
AGCTCGGCAATCGCCTCGCGTCTCTGCCCCGTCTTCTTCTCCAGGCCCAA
GCAGATGTGCAGCCAGGGCAAGTTGTCAGGTTCACCTTTGACTTCAGCAG
TCCCTGGGCTTACCTGGCCTCTACGCAGATTGAGCGAGTTGTTGCTGAGA
GTGGGGCGGCTCGTGTCCTGCTGGCGTGGAATCCCATCCTCCTGGGCGCG
CTCTTCCGCGACGTCGGTACGCCCAATATGCCCATGCTTGCTCTCAGCGA
AGCCAAGCGGGCATACAGTGGCCAGGATCTCCAAGATTGGTGCTCTTTCT
ATGGAAATGTGCCTCTCCGCTTCCCTGATACCTTCCCTCTCCGAACGGTG
CTGCCATTGAGGCTCACGCTCTTCTATATGCACCATTCCATCGAGACTGA
GCGTGGTGAGGTGGCCAAGCTCATTCACACCTTGTTCGCAGCTACCTGGC
AGCACAACGTGGACATAGGAAAGCCAGAGCCCCTCGCCGCGTTTCTGTTG
CTCTCTCCTGGCCGTCTTGTCCTTCAAGCAGGACTACAGAGAAACCTTGA
CACCTTTGAAGCATTGACGTCTCTTCTCGAAGAAGCGAACTCCTGCTCGC
TTGCGAAGAGCGGGCTGAGGAGGCGGACCGAAGCTGCTGTTCATGACGGC
TGCTGTGGCGTTCCGTCCTTCCAAATCAATGGCGGTCCGGTGCTCTGGGG
GCAGGACCGATTTCACTATCTTCAAGATGCCCTTTGTGGATGGATTGAGC
GAGTTGTTGCTGAGAGTGGGGCGGCTCGTGTCCTGCTGGCGTGGAATCCC
ATCCTCCTGGGCGCGCTCTTCCGCGACGTCGGTACGCCCAATATGCCCAT
GCTTGCTCTCAGCGAAGCCAAGCGGGCATACAGTGGCCAGGATCTCCAAG
ATTGGTGCTCTTTCTATGGAAATGTGCCTCTCCGCTTCCCTGATACCTTC
CCTCTCCGAACGGTGCTGCCATTGAGGCTCACGCTCTTCTATATGCACCA
TTCCATCGAGACTGAGCGTGGTGAGGTGGCCAAGCTCATTCACACCTTGT
TCGCAGCTACCTGGCAGCACAACGTGGACATAGGAAAGCCAGAGCCCCTC
GCCGCGTTTCTGTTGCTCTCTCCTGGCCGTCTTGTCCTTCAAGCAGGACT
ACAGAGAAACCTTGACACCTTTGAAGCATTGACGTCTCTTCTCGAAGAAG
CGAACTCCTGCTCGCTTGCGAAGAGCGGGCTGAGGAGGCGGACCGAAGCT
GCTGTTCATGACGGCTGCTGTGGCGTTCCGTCCTTCCAAATCAATGGCGG
TCCGGTGCTCTGGGGGCAGGACCGATTTCACTATCTTCAAGATGCCCTTT
GTGGATGG
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