mRNA_M-pyrifera_M_contig83141.19422.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig83141.19422.1
Unique NamemRNA_M-pyrifera_M_contig83141.19422.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig83141.19422.1 vs. uniprot
Match: A0A5A8EG60_CAFRO (Type II protein arginine methyltransferase n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EG60_CAFRO)

HSP 1 Score: 190 bits (483), Expect = 1.970e-52
Identity = 106/230 (46.09%), Postives = 132/230 (57.39%), Query Frame = 1
Query:    1 QLFSQCLTHPVHGYYVQNE--VFGRGGDFVTSPEVSSVFSEMVGVWLVSTWTSLGSPSHCRLVELGPGRGTLMRDVLRTLRRFPACFSAISAVHLVEVSATMRVRQAETLGCV-------GVEGDEEGNVENVDKWGVKEGLK-NREWGPVVQWHGGFEAIPADGALLCICHELFDALGVHQVEKGVDGKWREWLVDIDGFTPPKQPTSSTSPPAQIALGGPHHFRLVLS 660
            +   Q L HPVHGYY++ +  VFGR GDFVTSPEV+ VF E++GVWLV+ W  LGSP   R+VE+GPG GTLMRD LR   RFP  F A ++VH+VE S  +R +QAE L C        GV     G      + G+  G   +   GP + WHG    +P DGA LC+ HELFDAL VHQ+E+   G WRE LV++D                     G HHFRL L+
Sbjct:  107 EFMRQALLHPVHGYYMREDADVFGRRGDFVTSPEVTQVFGELIGVWLVAMWHQLGSPPLVRIVEMGPGLGTLMRDALRAASRFPG-FYAGASVHMVEASPALRRKQAEALACTEFTDAGPGVGAAGSGAAVESMRCGIGGGTPCSPVSGPTITWHGHVSDVPKDGAFLCVAHELFDALPVHQIERTARG-WRERLVEVDDDE------------------GGHHFRLALA 316          
BLAST of mRNA_M-pyrifera_M_contig83141.19422.1 vs. uniprot
Match: A0A1Y2CY85_9FUNG (Protein arginine methyltransferase NDUFAF7 n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2CY85_9FUNG)

HSP 1 Score: 175 bits (443), Expect = 7.180e-49
Identity = 97/224 (43.30%), Postives = 134/224 (59.82%), Query Frame = 1
Query:    1 QLFSQCLTHPVHGYYVQNEVFGRGGDFVTSPEVSSVFSEMVGVWLVSTWTSLGSPSHCRLVELGPGRGTLMRDVLRTLRRFPACFSAISAVHLVEVSATMRVRQAETLGCVGVEGDEEGNVEN--VDKWGVKEGLKNREWGPVVQWHGGFEAIPADGALLCICHELFDALGVHQVEKGVDGKWREWLVDIDGFTPPKQPTSSTSPPAQIALGGPHHFRLVLSPG 666
            Q   Q LTHP+ GYY++ +VFG  GDFVTSPE+S +F E++GVWLV+ W  +GSP    +VELGPGRGTLM DVLRT+ +F     AI +V++VE S  +R  Q++ L      G+E  +V N  V+K  V+   + +  G  + WH G E++     ++ I HE FDA+ V+Q +   DG WRE +VD D        +SST          PH+FR +LSPG
Sbjct:   74 QFMRQALTHPMGGYYMKQDVFGTKGDFVTSPEISQMFGELIGVWLVAQWQQMGSPRKFNIVELGPGRGTLMSDVLRTVTQFKGFTEAIGSVNMVEASPYLRGVQSKLLT-----GEEVQDVRNDVVEKGVVQGRTEEKREGFQIHWHDGLESVERGLPIMLIAHEFFDAMPVYQFQMASDG-WREVMVDTDD-------SSST----------PHNFRYILSPG 274          
BLAST of mRNA_M-pyrifera_M_contig83141.19422.1 vs. uniprot
Match: D0NYW2_PHYIT (Protein arginine methyltransferase NDUFAF7 n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NYW2_PHYIT)

HSP 1 Score: 171 bits (434), Expect = 6.780e-48
Identity = 87/189 (46.03%), Postives = 117/189 (61.90%), Query Frame = 1
Query:    1 QLFSQCLTHPVHGYYVQNEVFGRGGDFVTSPEVSSVFSEMVGVWLVSTWTSLGSPSHCRLVELGPGRGTLMRDVLRTLRRFPACFSAISAVHLVEVSATMRVRQAETLGCVGVEGDEEGNVENVDKWGVKEGLKNREWGPVVQWHGGFEAIPADGALLCICHELFDALGVHQVEKGVDGKWREWLVDID 567
            +  S+ L+HP HGYY++ +VFG  GDF T+PE+S +F E++ VW V+TW  +G PSH ++VE+GPGRG+LM D LR  + FP  + AI  +H+V++S  M+  Q ETL C  VE          DK   +  ++  + GP V+WH  F  +P  G  L I  ELFDAL VHQ E   D  WRE LVDID
Sbjct:  109 EFMSRSLSHPDHGYYMKKDVFGSQGDFTTAPEISQMFGELIAVWCVATWQQMGMPSHIKIVEMGPGRGSLMSDFLRAAKSFPPFYDAIE-IHMVDISPAMQKIQQETLKCEPVE----------DKTAPENTMRLPDNGPTVRWHADFANVP-HGPSLMIAQELFDALPVHQFEY-TDRGWRERLVDID 284          
BLAST of mRNA_M-pyrifera_M_contig83141.19422.1 vs. uniprot
Match: V9E4J7_PHYPR (Protein arginine methyltransferase NDUFAF7 n=12 Tax=Phytophthora TaxID=4783 RepID=V9E4J7_PHYPR)

HSP 1 Score: 170 bits (431), Expect = 1.370e-46
Identity = 86/189 (45.50%), Postives = 117/189 (61.90%), Query Frame = 1
Query:    1 QLFSQCLTHPVHGYYVQNEVFGRGGDFVTSPEVSSVFSEMVGVWLVSTWTSLGSPSHCRLVELGPGRGTLMRDVLRTLRRFPACFSAISAVHLVEVSATMRVRQAETLGCVGVEGDEEGNVENVDKWGVKEGLKNREWGPVVQWHGGFEAIPADGALLCICHELFDALGVHQVEKGVDGKWREWLVDID 567
            +  S+ L+HP HGYY++ +VFG  GDF T+PE+S +F E++ VW V+TW  +G PSH ++VE+GPGRG+LM D LR  + FP  + AI  +H+V++S  M+  Q ETL C  +E          DK   +  ++  + GP V+WH  F  +P  G  L I  ELFDAL VHQ E   D  WRE LVDID
Sbjct:  109 EFMSRALSHPDHGYYMKKDVFGSQGDFTTAPEISQMFGELIAVWCVATWQQMGMPSHIKIVEMGPGRGSLMSDFLRAAKSFPPFYEAIE-IHMVDISPAMQKIQQETLKCEPIE----------DKTVPENTMRLPDNGPTVRWHADFANVP-HGPSLMIAQELFDALPVHQFEY-TDRGWRERLVDID 284          
BLAST of mRNA_M-pyrifera_M_contig83141.19422.1 vs. uniprot
Match: G4YQJ5_PHYSP (Protein arginine methyltransferase NDUFAF7 (Fragment) n=2 Tax=Phytophthora TaxID=4783 RepID=G4YQJ5_PHYSP)

HSP 1 Score: 166 bits (419), Expect = 5.340e-46
Identity = 83/189 (43.92%), Postives = 116/189 (61.38%), Query Frame = 1
Query:    1 QLFSQCLTHPVHGYYVQNEVFGRGGDFVTSPEVSSVFSEMVGVWLVSTWTSLGSPSHCRLVELGPGRGTLMRDVLRTLRRFPACFSAISAVHLVEVSATMRVRQAETLGCVGVEGDEEGNVENVDKWGVKEGLKNREWGPVVQWHGGFEAIPADGALLCICHELFDALGVHQVEKGVDGKWREWLVDID 567
            +  ++ L+HP HGYY++ +VFG  GDF T+PE+S +F E++ VW V+TW  +G P+H ++VE+GPGRG+LM D LR  + FP  + AI  +H+V++S  M+  Q ETL C  +E          DK   +  ++  + GP V+WH  F  +P  G  L I  ELFDAL VHQ E   D  W E LVDID
Sbjct:   19 EFMTRALSHPDHGYYMKKDVFGSQGDFTTAPEISQMFGELIAVWCVATWQQMGMPAHIKIVEMGPGRGSLMSDFLRASKSFPPFYEAIE-IHMVDISPAMQKIQQETLKCEPIE----------DKTAPENTMRLPDNGPTVRWHADFANVP-HGPSLMIAQELFDALPVHQFEY-TDRGWCERLVDID 194          
BLAST of mRNA_M-pyrifera_M_contig83141.19422.1 vs. uniprot
Match: A0A139AM39_GONPJ (Protein arginine methyltransferase NDUFAF7 n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139AM39_GONPJ)

HSP 1 Score: 166 bits (419), Expect = 2.650e-45
Identity = 102/228 (44.74%), Postives = 127/228 (55.70%), Query Frame = 1
Query:    1 QLFSQCLTHPVHGYYVQNEVFGRGGDFVTSPEVSSVFSEMVGVWLVSTWTSLGSPSHCRLVELGPGRGTLMRDVLRTLRRFPACFSAISAVHLVEVSATMRVRQAETLGCVGVEGDEEGNVENVDKWGVKEGLKN-REWGPVVQWHGGFEAIPADGAL------LCICHELFDALGVHQVEKGVDGKWREWLVDIDGFTPPKQPTSSTSPPAQIALGGPHHFRLVLSP 663
            Q     LT+P  GYY+Q +VFG+ GDFVTSPE+S +F E VGVWLV+ W SLG PS   ++ELGPGRGTLM DVLRT   F A  S I  VHLVE   +MR  QA  L   G     + + ++ D  G +  LK  R+ G  V W G F  +P    L      + I HE FDAL +H+ E   +G WRE ++D+D         S TSP         +HFR VLSP
Sbjct:   84 QFMRFSLTNPSGGYYMQGDVFGKKGDFVTSPEISQMFGECVGVWLVTQWESLGKPSRFNILELGPGRGTLMNDVLRTSTNFAAFHSCIETVHLVEAGPSMRSMQARKLVADGHLETSDTSKDHKDI-GFEGPLKGVRQDGIEVAWWGSFVEVPEGENLSSSVPTITIAHEFFDALPIHRFELTPNG-WREIMIDVD--------ESDTSP---------YHFRYVLSP 292          
BLAST of mRNA_M-pyrifera_M_contig83141.19422.1 vs. uniprot
Match: A0A059LF56_9CHLO (Protein arginine methyltransferase NDUFAF7 (Fragment) n=1 Tax=Helicosporidium sp. ATCC 50920 TaxID=1291522 RepID=A0A059LF56_9CHLO)

HSP 1 Score: 160 bits (404), Expect = 4.270e-45
Identity = 100/244 (40.98%), Postives = 125/244 (51.23%), Query Frame = 1
Query:    1 QLFSQCLTHPVHGYYVQNEVFGRGGDFVTSPEVSSVFSEMVGVWLVSTWTSLGSPSHCRLVELGPGRGTLMRDVLRTLRRFPACFSAISAVHLVEVSATMRVRQAETLGCVGVEGDEEGNVENVDKWGVKEGLKNRE---------------------WGPV-VQWHGGFEAIPADGALLCICHELFDALGVHQVEKGVDGKWREWLVDIDGFTPPKQPTSSTSPPAQIALGGPHHFRLVLSPG 666
            +  S+ LT+P HGYY+  +VFGR GDF TSPE+S +F EM+GVW V+ W  LGSP    LVE+GPGRGTLM D+LR    FPA FS    VHLVEVS  +   Q  TL C    G+        D    K G+  R                      +G V ++WH   +++ +D   L I HEL DAL VHQ +K   G W E LVD+          +S   P Q+        RLVLSPG
Sbjct:    3 EYMSEVLTNPRHGYYITRDVFGRKGDFTTSPEISQIFGEMIGVWCVAMWARLGSPERLALVEMGPGRGTLMADLLRGTLAFPA-FSKALEVHLVEVSPVLSNVQHATLRCGQTTGESRDAAVRDDSGVHKRGVDGRSTSNASFARPMPSFPPSPSTSAFGNVPIRWHQSIDSVSSDTPTLYIAHELLDALPVHQFQKTSRG-WCERLVDV----------ASDDSPLQL--------RLVLSPG 226          
BLAST of mRNA_M-pyrifera_M_contig83141.19422.1 vs. uniprot
Match: A0A197JMJ9_9FUNG (Protein arginine methyltransferase NDUFAF7 n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197JMJ9_9FUNG)

HSP 1 Score: 163 bits (412), Expect = 6.070e-45
Identity = 90/220 (40.91%), Postives = 129/220 (58.64%), Query Frame = 1
Query:   13 QCLTHPVHGYYVQNEVFGRGGDFVTSPEVSSVFSEMVGVWLVSTWTSLGSPSHCRLVELGPGRGTLMRDVLRTLRRFPACFSAISAVHLVEVSATMRVRQAETLGCVGVEGDEEGNVENVDKWGVKEGLKN--REWGPVVQWHGGFEAIPADGALLCICHELFDALGVHQVEKGVDGKWREWLVDIDGFTPPKQPTSSTSPPAQIALGGPHHFRLVLSPG 666
            Q L +P+ GYY++ +VFG  GDF+TSPE+S +F E++G+W +  W ++G PS  ++VELGPGRGTLM D+LR   RF     AIS VHLVE S  +R  Q +TL  + +  ++ G        G KEG+    R  G  + WH  F+ +P D   L + HE FDAL +++ EK  +G WRE +VD++     + P S+            +HFR VL+PG
Sbjct:    9 QVLVNPLSGYYMKGDVFGTQGDFITSPEISQMFGELLGIWFLVQWQNIGKPSRVQIVELGPGRGTLMMDMLRAASRFKEFRKAISGVHLVEASPGLRKMQRQTLCGIPLSEEQVGG-------GSKEGITAAVRPDGLQISWHDVFDDLP-DECSLIVAHEFFDALPIYKFEKTDEG-WRELVVDLE-----EDPAST------------YHFRFVLAPG 202          
BLAST of mRNA_M-pyrifera_M_contig83141.19422.1 vs. uniprot
Match: A0A8H7BLP7_9FUNG (Protein arginine methyltransferase NDUFAF7 n=1 Tax=Apophysomyces ossiformis TaxID=679940 RepID=A0A8H7BLP7_9FUNG)

HSP 1 Score: 162 bits (411), Expect = 8.160e-45
Identity = 91/223 (40.81%), Postives = 124/223 (55.61%), Query Frame = 1
Query:   13 QCLTHPVHGYYVQNEVFGRGGDFVTSPEVSSVFSEMVGVWLVSTWTSLGSPSHCRLVELGPGRGTLMRDVLRTLRRFPACFSAISAVHLVEVSATMRVRQAETLGCVGVEGDEEGNVENV--DKWGVKEGLKNREWGPVVQWHGGFEAIPADGAL----LCICHELFDALGVHQVEKGVDGKWREWLVDIDGFTPPKQPTSSTSPPAQIALGGPHHFRLVLSP 663
            Q L +P+ GYY+  +VFGR GDFVTSPE+S +F E+ G+W ++ W  LG PS  ++VE GPGRGTLM D+LR L RFP  +  I+ VHL+E S  +R  Q   L    VEG ++ +VE    D+         R  G  + WH G E +P +  L      + HE FDA+ +H  EK  +G WRE LVD+D        T+ T           ++FR+V SP
Sbjct:    7 QVLVNPLSGYYMHGDVFGREGDFVTSPEISQMFGELAGIWYLTEWMRLGKPSKTQIVEFGPGRGTLMSDMLRALSRFPYFYETITGVHLLEASPGLRKMQRAAL----VEGSQDSDVERFKGDEDNPPVETIRRADGITISWHDGIEFVPRNSVLEQWSFIMAHEFFDAMPIHAFEKTEEG-WREMLVDMDD-------TNETE----------YNFRIVRSP 207          
BLAST of mRNA_M-pyrifera_M_contig83141.19422.1 vs. uniprot
Match: A0A8H7PZN8_MORIS (Protein arginine methyltransferase NDUFAF7 n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7PZN8_MORIS)

HSP 1 Score: 164 bits (414), Expect = 1.120e-44
Identity = 91/219 (41.55%), Postives = 124/219 (56.62%), Query Frame = 1
Query:   13 QCLTHPVHGYYVQNEVFGRGGDFVTSPEVSSVFSEMVGVWLVSTWTSLGSPSHCRLVELGPGRGTLMRDVLRTLRRFPACFSAISAVHLVEVSATMRVRQAETLGCVGVEGDEEGNVENV-DKWGVKEGLKNREWGPVVQWHGGFEAIPADGALLCICHELFDALGVHQVEKGVDGKWREWLVDIDGFTPPKQPTSSTSPPAQIALGGPHHFRLVLSPG 666
            Q L +P+ GYY++ +VFG  GDF+TSPE+S +F E+ G+W ++ W  LG PS  +LVE GPGRGTLM D+LR L +FP  +  I  VHLVE S  +R  Q   L    + G  E +V+++ D+  V      R  G  + W+ G E +P D   + + HE FDAL +H  EK  DG WRE LV +D        T+ T           ++FRLV SPG
Sbjct:   74 QVLVNPLSGYYMKGDVFGSKGDFITSPEISQMFGELAGIWYLTEWYRLGQPSKTQLVECGPGRGTLMDDMLRALSKFPEMYKTIQGVHLVEASPGLRKMQRSLL----IPGSTEEDVKHIEDERNVPYQNCKRADGININWYDGIEFLPNDAWSMIMAHEFFDALPIHTFEKAEDG-WREMLVHMDD-------TNETE----------YNFRLVQSPG 270          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig83141.19422.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A8EG60_CAFRO1.970e-5246.09Type II protein arginine methyltransferase n=2 Tax... [more]
A0A1Y2CY85_9FUNG7.180e-4943.30Protein arginine methyltransferase NDUFAF7 n=1 Tax... [more]
D0NYW2_PHYIT6.780e-4846.03Protein arginine methyltransferase NDUFAF7 n=1 Tax... [more]
V9E4J7_PHYPR1.370e-4645.50Protein arginine methyltransferase NDUFAF7 n=12 Ta... [more]
G4YQJ5_PHYSP5.340e-4643.92Protein arginine methyltransferase NDUFAF7 (Fragme... [more]
A0A139AM39_GONPJ2.650e-4544.74Protein arginine methyltransferase NDUFAF7 n=1 Tax... [more]
A0A059LF56_9CHLO4.270e-4540.98Protein arginine methyltransferase NDUFAF7 (Fragme... [more]
A0A197JMJ9_9FUNG6.070e-4540.91Protein arginine methyltransferase NDUFAF7 n=1 Tax... [more]
A0A8H7BLP7_9FUNG8.160e-4540.81Protein arginine methyltransferase NDUFAF7 n=1 Tax... [more]
A0A8H7PZN8_MORIS1.120e-4441.55Protein arginine methyltransferase NDUFAF7 n=1 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig83141contigM-pyrifera_M_contig83141:185..898 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score178.3
Seed ortholog evalue3.9e-42
Seed eggNOG ortholog4787.PITG_19122T0
KEGG koko:K18164
KEGG Pathwayko04714,map04714
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005975,GO:0005976,GO:0005977,GO:0006073,GO:0006082,GO:0006091,GO:0006112,GO:0006139,GO:0006163,GO:0006520,GO:0006536,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006897,GO:0006907,GO:0006909,GO:0006996,GO:0007005,GO:0008150,GO:0008152,GO:0009064,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009266,GO:0009314,GO:0009416,GO:0009453,GO:0009605,GO:0009628,GO:0009653,GO:0009892,GO:0009894,GO:0009895,GO:0009987,GO:0010257,GO:0010506,GO:0010507,GO:0010638,GO:0010821,GO:0010822,GO:0015980,GO:0016043,GO:0016192,GO:0017144,GO:0019222,GO:0019637,GO:0019693,GO:0019752,GO:0022603,GO:0022607,GO:0030154,GO:0030435,GO:0030587,GO:0031154,GO:0031323,GO:0031324,GO:0031329,GO:0031330,GO:0032502,GO:0032981,GO:0033043,GO:0033108,GO:0034622,GO:0034641,GO:0040011,GO:0042330,GO:0042331,GO:0043052,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043648,GO:0043933,GO:0043934,GO:0044042,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044262,GO:0044264,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046034,GO:0046483,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048646,GO:0048856,GO:0048869,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051094,GO:0051128,GO:0051130,GO:0051179,GO:0051234,GO:0051703,GO:0051704,GO:0055086,GO:0055114,GO:0065003,GO:0065007,GO:0071704,GO:0071840,GO:0072521,GO:0090140,GO:0090141,GO:0090702,GO:0098657,GO:0099120,GO:1901135,GO:1901360,GO:1901564,GO:1901605
EggNOG free text desc.Arginine methyltransferase involved in the assembly or stability of mitochondrial NADH ubiquinone oxidoreductase complex (complex I)
EggNOG OGs3Q903@4776,COG1565@1,KOG2901@2759
COG Functional cat.S
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03029
Exons2
Model size666
Cds size666
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816738.395016-CDS-M-pyrifera_M_contig83141:184..5511622816738.395016-CDS-M-pyrifera_M_contig83141:184..551Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig83141 185..551 +
1692278149.2696052-CDS-M-pyrifera_M_contig83141:184..5511692278149.2696052-CDS-M-pyrifera_M_contig83141:184..551Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig83141 185..551 +
1622816738.4132817-CDS-M-pyrifera_M_contig83141:599..8981622816738.4132817-CDS-M-pyrifera_M_contig83141:599..898Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig83141 600..898 +
1692278149.2837856-CDS-M-pyrifera_M_contig83141:599..8981692278149.2837856-CDS-M-pyrifera_M_contig83141:599..898Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig83141 600..898 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig83141.19422.1prot_M-pyrifera_M_contig83141.19422.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig83141 185..898 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig83141.19422.1

>prot_M-pyrifera_M_contig83141.19422.1 ID=prot_M-pyrifera_M_contig83141.19422.1|Name=mRNA_M-pyrifera_M_contig83141.19422.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=222bp
QLFSQCLTHPVHGYYVQNEVFGRGGDFVTSPEVSSVFSEMVGVWLVSTWT
SLGSPSHCRLVELGPGRGTLMRDVLRTLRRFPACFSAISAVHLVEVSATM
RVRQAETLGCVGVEGDEEGNVENVDKWGVKEGLKNREWGPVVQWHGGFEA
IPADGALLCICHELFDALGVHQVEKGVDGKWREWLVDIDGFTPPKQPTSS
TSPPAQIALGGPHHFRLVLSPG
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mRNA from alignment at M-pyrifera_M_contig83141:185..898+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig83141.19422.1 ID=mRNA_M-pyrifera_M_contig83141.19422.1|Name=mRNA_M-pyrifera_M_contig83141.19422.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=714bp|location=Sequence derived from alignment at M-pyrifera_M_contig83141:185..898+ (Macrocystis pyrifera P11B4 male)
CAATTGTTTTCACAGTGCTTGACGCATCCAGTACATGGGTACTATGTGCA GAACGAGGTATTTGGGCGTGGTGGGGATTTTGTGACTTCTCCGGAGGTTT CGAGTGTGTTTTCTGAAATGGTTGGGGTGTGGTTGGTGTCTACGTGGACT TCATTAGGTTCTCCGTCACATTGTCGTCTGGTAGAGCTGGGTCCTGGACG AGGCACGTTGATGCGTGACGTGCTGCGGACTTTACGTCGTTTTCCAGCAT GTTTCTCCGCTATTTCTGCGGTACACTTGGTGGAAGTGTCTGCTACAATG CGAGTGCGGCAAGCGGAGACATTGGGGTGTGTTGGAGTGGAGGGTGACGA GGAGGGAAATGTTGAAAGTGCTGGGAAAATGGGAGAGGATGGGGATGGTG CCGTGATGTGGCTAGATGTGGACAAGTGGGGGGTAAAGGAGGGATTAAAG AACAGAGAATGGGGGCCAGTGGTGCAATGGCACGGTGGGTTTGAAGCCAT TCCTGCAGATGGTGCCCTCTTGTGTATTTGTCACGAGTTGTTTGATGCAT TAGGAGTTCATCAAGTAGAAAAAGGTGTGGATGGCAAGTGGCGAGAATGG CTTGTGGACATTGACGGCTTTACACCTCCCAAACAGCCCACATCATCCAC TTCCCCTCCAGCTCAGATTGCCTTGGGAGGGCCACACCACTTTCGACTGG TCCTTTCCCCAGGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig83141:185..898+

>mRNA_M-pyrifera_M_contig83141.19422.1 ID=mRNA_M-pyrifera_M_contig83141.19422.1|Name=mRNA_M-pyrifera_M_contig83141.19422.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1332bp|location=Sequence derived from alignment at M-pyrifera_M_contig83141:185..898+ (Macrocystis pyrifera P11B4 male)
CAATTGTTTTCACAGTGCTTGACGCATCCAGTACATGGGTACTATGTGCA
GAACGAGGTATTTGGGCGTGGTGGGGATTTTGTGACTTCTCCGGAGGTTT
CGAGTGTGTTTTCTGAAATGGTTGGGGTGTGGTTGGTGTCTACGTGGACT
TCATTAGGTTCTCCGTCACATTGTCGTCTGGTAGAGCTGGGTCCTGGACG
AGGCACGTTGATGCGTGACGTGCTGCGGACTTTACGTCGTTTTCCAGCAT
GTTTCTCCGCTATTTCTGCGGTACACTTGGTGGAAGTGTCTGCTACAATG
CGAGTGCGGCAAGCGGAGACATTGGGGTGTGTTGGAGTGGAGGGTGACGA
GGAGGGAAATGTTGAAACAATTGTTTTCACAGTGCTTGACGCATCCAGTA
CATGGGTACTATGTGCAGAACGAGGTATTTGGGCGTGGTGGGGATTTTGT
GACTTCTCCGGAGGTTTCGAGTGTGTTTTCTGAAATGGTTGGGGTGTGGT
TGGTGTCTACGTGGACTTCATTAGGTTCTCCGTCACATTGTCGTCTGGTA
GAGCTGGGTCCTGGACGAGGCACGTTGATGCGTGACGTGCTGCGGACTTT
ACGTCGTTTTCCAGCATGTTTCTCCGCTATTTCTGCGGTACACTTGGTGG
AAGTGTCTGCTACAATGCGAGTGCGGCAAGCGGAGACATTGGGGTGTGTT
GGAGTGGAGGGTGACGAGGAGGGAAATGTTGAAAATGTGGACAAGTGGGG
GGTAAAGGAGGGATTAAAGAACAGAGAATGGGGGCCAGTGGTGCAATGGC
ACGGTGGGTTTGAAGCCATTCCTGCAGATGGTGCCCTCTTGTGTATTTGT
CACGAGTTGTTTGATGCATTAGGAGTTCATCAAGTAGAAAAAGGTGTGGA
TGGCAAGTGGCGAGAATGGCTTGTGGACATTGACGGCTTTACACCTCCCA
AACAGCCCACATCATCCACTTCCCCTCCAGCTCAGATTGCCTTGGGAGGG
CCACACCACTTTCGACTGGTCCTTTCCCCAGGAATGTGGACAAGTGGGGG
GTAAAGGAGGGATTAAAGAACAGAGAATGGGGGCCAGTGGTGCAATGGCA
CGGTGGGTTTGAAGCCATTCCTGCAGATGGTGCCCTCTTGTGTATTTGTC
ACGAGTTGTTTGATGCATTAGGAGTTCATCAAGTAGAAAAAGGTGTGGAT
GGCAAGTGGCGAGAATGGCTTGTGGACATTGACGGCTTTACACCTCCCAA
ACAGCCCACATCATCCACTTCCCCTCCAGCTCAGATTGCCTTGGGAGGGC
CACACCACTTTCGACTGGTCCTTTCCCCAGGA
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