mRNA_M-pyrifera_M_contig82789.19345.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig82789.19345.1
Unique NamemRNA_M-pyrifera_M_contig82789.19345.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig82789.19345.1 vs. uniprot
Match: UPI000CF80CBD (phosphoacetylglucosamine mutase-like n=1 Tax=Oryzias melastigma TaxID=30732 RepID=UPI000CF80CBD)

HSP 1 Score: 206 bits (524), Expect = 1.210e-63
Identity = 110/194 (56.70%), Postives = 140/194 (72.16%), Query Frame = 1
Query:   16 CVCAQVKHLHHAAMDFDVGVYFEANGHGTVLLSPELQERLRQGAADDAG-SDESRAACRRLLAAAQLLNQAVGDAMSDLLFVEAVLASKGWGLQEWSDLYTDLPSRMLKVKVEDRSVVVTNADETRCLEPSSLQDEIDRLMAA-RDGRSFVRPSGTEDVVRVYAEAPTQEAADALAAEVSGATHDHAGGVGDRP 591
            C    VKHLHHAA++FDVGVYFEANGHGTVL S   +++++Q A D +   DE + A   L +   ++NQ VGDA+SD+L +EA+LA KG  +++W  +YTDLP+R LKVKV DR V+ T   E R + P+ LQD ID L+   R+ RSFVRPSGTEDVVRVYAEA TQE+ADALA +VS A +  AGGVG+ P
Sbjct:   53 CTKTGVKHLHHAALEFDVGVYFEANGHGTVLFSKAAEDQIQQLAQDSSSIDDERKRAALMLQSTVNVINQTVGDALSDMLLIEAILAIKGMTVEQWDRIYTDLPNRQLKVKVSDRRVIDTTDAERRAVSPAGLQDAIDGLVKNYRNARSFVRPSGTEDVVRVYAEADTQESADALAHDVSLAVYRRAGGVGEEP 246          
BLAST of mRNA_M-pyrifera_M_contig82789.19345.1 vs. uniprot
Match: A0A7S2SUY6_9STRA (Phosphoacetylglucosamine mutase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SUY6_9STRA)

HSP 1 Score: 215 bits (547), Expect = 1.500e-63
Identity = 112/188 (59.57%), Postives = 133/188 (70.74%), Query Frame = 1
Query:   31 VKHLHHAAMDFDVGVYFEANGHGTVLLSPELQERLRQGAADDAGSDESRAACRRLLAAAQLLNQAVGDAMSDLLFVEAVLASKGWGLQEWSDLYTDLPSRMLKVKVEDRSVVVTNADETRCLEPSSLQDEIDRLMAA-RDGRSFVRPSGTEDVVRVYAEAPTQEAADALAAEVSGATHDHAGGVGDRP 591
            VK++HH A  +D+GVYFEANGHGTVL    + + LRQ    + G    R A  RLLA  Q++NQAVGDA+SD+LFVEA+L  +GWGL++W  LYTDLPSR +K+ V DRSVV  + DETR LEP  LQ  +D  MAA   GR FVRPSGTEDVVRVYAEA  Q  ADALA   + A  D AGG+GDRP
Sbjct:  384 VKYVHHVATKYDIGVYFEANGHGTVLFKAHVIDHLRQLLVQEQGPSRRRVALERLLATQQIVNQAVGDAISDILFVEAILRVRGWGLEQWDALYTDLPSRQMKLPVADRSVVQCSPDETRALEPQGLQATLDEAMAAVSQGRCFVRPSGTEDVVRVYAEAANQTEADALAVAAAQAVFDFAGGIGDRP 571          
BLAST of mRNA_M-pyrifera_M_contig82789.19345.1 vs. uniprot
Match: UPI0018648734 (phosphoacetylglucosamine mutase n=1 Tax=Megalops cyprinoides TaxID=118141 RepID=UPI0018648734)

HSP 1 Score: 212 bits (540), Expect = 9.380e-63
Identity = 114/193 (59.07%), Postives = 140/193 (72.54%), Query Frame = 1
Query:   16 CVCAQVKHLHHAAMDFDVGVYFEANGHGTVLLSPELQERLRQGAADDAGSDESRAACRRLLAAAQLLNQAVGDAMSDLLFVEAVLASKGWGLQEWSDLYTDLPSRMLKVKVEDRSVVVTNADETRCLEPSSLQDEIDRLMAA-RDGRSFVRPSGTEDVVRVYAEAPTQEAADALAAEVSGATHDHAGGVGDRP 591
            CV   VKHLHHAA +FD+GVYFEANGHGTVL S   +E+++Q A D   +DE ++A R L +   L+NQ VGDA+SD+L +EAVLA KG  +Q+W  +YTDLP+R LKVKV DR V+ T   E R + P+ LQD ID L+   +  R+FVRPSGTEDVVRVYAEA TQE ADALA EVS A +  AGGVG+ P
Sbjct:  349 CVKTGVKHLHHAAQEFDIGVYFEANGHGTVLFSKAAEEKIQQLALDPNTNDEKKSAARLLESTVNLINQTVGDALSDMLLIEAVLAIKGLTIQQWDAIYTDLPNRQLKVKVADRRVIDTTDAERRAVSPAGLQDTIDALVKKYKMSRAFVRPSGTEDVVRVYAEADTQENADALAHEVSVAVYRIAGGVGEEP 541          
BLAST of mRNA_M-pyrifera_M_contig82789.19345.1 vs. uniprot
Match: A0A8K0D5L3_9COLE (Uncharacterized protein n=1 Tax=Ignelater luminosus TaxID=2038154 RepID=A0A8K0D5L3_9COLE)

HSP 1 Score: 212 bits (539), Expect = 1.070e-62
Identity = 104/193 (53.89%), Postives = 142/193 (73.58%), Query Frame = 1
Query:   16 CVCAQVKHLHHAAMDFDVGVYFEANGHGTVLLSPELQERLRQGAADDAGSDESRAACRRLLAAAQLLNQAVGDAMSDLLFVEAVLASKGWGLQEWSDLYTDLPSRMLKVKVEDRSVVVTNADETRCLEPSSLQDEIDRLMAARD-GRSFVRPSGTEDVVRVYAEAPTQEAADALAAEVSGATHDHAGGVGDRP 591
            CV   VKHLHH A+++DVGVYFEANGHGTV+ S   +++L + A +++ S+E +    +LLA   ++N+ VGDA+SD+L VE +L +KGWG+Q+W + YTDLP+++LKV VEDR+V+ T   E +C  P  LQ+EID L+   + GRSFVRPSGTED+VRVYAEA TQE  D LAAEV+   ++ AGG+G  P
Sbjct:  339 CVSTGVKHLHHKALEYDVGVYFEANGHGTVIFSKNAKDKLNEAAKNNSLSEEQQKVANKLLALIDVINETVGDAISDMLLVETILHAKGWGVQQWEETYTDLPNKLLKVTVEDRNVISTKDAERQCTTPVGLQEEIDTLVKKYNKGRSFVRPSGTEDIVRVYAEAATQEETDKLAAEVATKVYELAGGIGTMP 531          
BLAST of mRNA_M-pyrifera_M_contig82789.19345.1 vs. uniprot
Match: A0A418AYT8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418AYT8_9STRA)

HSP 1 Score: 204 bits (520), Expect = 1.880e-62
Identity = 104/190 (54.74%), Postives = 136/190 (71.58%), Query Frame = 1
Query:   31 VKHLHHAAMDFDVGVYFEANGHGTVLLSPELQERLRQGAADDAGSDESRAACRRLLAAAQLLNQAVGDAMSDLLFVEAVLASKGWGLQEWSDLYTDLPSRMLKVKVEDRSVVVTNADETRCLEPSSLQDEIDRLMAAR--DGRSFVRPSGTEDVVRVYAEAPTQEAADALAAEVSGATHDHAGGVGDRPS 594
            VK  HH A+DFD+G+YFEANGHGTV++   + ERL +  A  +  D+ ++A   LLAA QL+NQAVGDA+SD LF E +L  K W +Q W+++YTDLPSR  KVK+ DR+VV T  DET CL P +L++ ID L+AA     R+FVRPSGTED VRVYAEA T+  A+ LA +V+ A H HA G+G+ P+
Sbjct:  105 VKFCHHKALDFDIGIYFEANGHGTVMMKDHVVERLTKLEASTSLDDKKKSAVAHLLAAYQLINQAVGDALSDFLFAEVLLIQKDWTIQAWNNMYTDLPSRQTKVKIADRTVVRTTEDETACLAPDALKEAIDGLVAAAGPQARAFVRPSGTEDAVRVYAEAQTEAGANELALKVAQAVHAHAAGIGEAPT 294          
BLAST of mRNA_M-pyrifera_M_contig82789.19345.1 vs. uniprot
Match: A0A0T6B8G5_9SCAR (Phosphoacetylglucosamine mutase n=1 Tax=Oryctes borbonicus TaxID=1629725 RepID=A0A0T6B8G5_9SCAR)

HSP 1 Score: 211 bits (538), Expect = 2.230e-62
Identity = 105/193 (54.40%), Postives = 140/193 (72.54%), Query Frame = 1
Query:   16 CVCAQVKHLHHAAMDFDVGVYFEANGHGTVLLSPELQERLRQGAADDAGSDESRAACRRLLAAAQLLNQAVGDAMSDLLFVEAVLASKGWGLQEWSDLYTDLPSRMLKVKVEDRSVVVTNADETRCLEPSSLQDEIDRLMAARD-GRSFVRPSGTEDVVRVYAEAPTQEAADALAAEVSGATHDHAGGVGDRP 591
            CV   VKHLHH A++++VGVYFEANGHGTV+     ++RL+Q   D + SD  R A +RLL    ++N+ VGDA+SD+L VE +L +KGW +Q+W   YTDLP+R++KV +E+R+V+ T   E  CL P  LQDEI+ L++  +  RSFVRPSGTED+VRVYAEA T+E AD LAAEV    ++ AGG+GDRP
Sbjct:  356 CVSTGVKHLHHKAVEYEVGVYFEANGHGTVIFRQSAKDRLKQAVEDSSRSDAQRNAAKRLLNLINVINETVGDAISDMLVVETILHAKGWDVQDWEATYTDLPNRLIKVTIENRNVITTTDAERICLTPPGLQDEINALVSKYNKARSFVRPSGTEDIVRVYAEAATREEADMLAAEVGQKVYEMAGGIGDRP 548          
BLAST of mRNA_M-pyrifera_M_contig82789.19345.1 vs. uniprot
Match: A0A3B4ZQD2_9TELE (Phosphoacetylglucosamine mutase n=3 Tax=Pomacentridae TaxID=30863 RepID=A0A3B4ZQD2_9TELE)

HSP 1 Score: 211 bits (536), Expect = 3.580e-62
Identity = 116/198 (58.59%), Postives = 141/198 (71.21%), Query Frame = 1
Query:    1 VLTRVCVCAQVKHLHHAAMDFDVGVYFEANGHGTVLLSPELQERLRQGAADDAGSDESRAACRRLLAAAQLLNQAVGDAMSDLLFVEAVLASKGWGLQEWSDLYTDLPSRMLKVKVEDRSVVVTNADETRCLEPSSLQDEIDRLMAA-RDGRSFVRPSGTEDVVRVYAEAPTQEAADALAAEVSGATHDHAGGVGDRP 591
            VL R C    VKHLHHAA +FDVGVYFEANGHGTVL S   +E+++Q A D   +DE + A R L     ++NQ VGDA+SD+L +EA+LA KG  +Q+W  +Y+DLP+R LKVKV DR V+ T   E R + P+ LQD ID L+   R  RSFVRPSGTEDVVRVYAEA TQE+AD+LA EVS A +  AGGVGD P
Sbjct:  344 VLVR-CTKTGVKHLHHAAQEFDVGVYFEANGHGTVLFSKAAEEKIQQLAEDAGINDERKRAARLLQNTVDVINQTVGDAISDMLLIEAILAIKGMTVQQWDSIYSDLPNRQLKVKVSDRRVIDTADAERRAVSPAGLQDAIDSLVKKYRQARSFVRPSGTEDVVRVYAEAETQESADSLAHEVSLAVYRLAGGVGDEP 540          
BLAST of mRNA_M-pyrifera_M_contig82789.19345.1 vs. uniprot
Match: A0A3Q2CJQ5_CYPVA (Phosphoacetylglucosamine mutase n=5 Tax=Cyprinodontoidei TaxID=8087 RepID=A0A3Q2CJQ5_CYPVA)

HSP 1 Score: 211 bits (536), Expect = 3.660e-62
Identity = 114/193 (59.07%), Postives = 138/193 (71.50%), Query Frame = 1
Query:   16 CVCAQVKHLHHAAMDFDVGVYFEANGHGTVLLSPELQERLRQGAADDAGSDESRAACRRLLAAAQLLNQAVGDAMSDLLFVEAVLASKGWGLQEWSDLYTDLPSRMLKVKVEDRSVVVTNADETRCLEPSSLQDEIDRLMAA-RDGRSFVRPSGTEDVVRVYAEAPTQEAADALAAEVSGATHDHAGGVGDRP 591
            C    VKHLHHAA +FDVGVYFEANGHGTVL S E +E+++Q A+D    DE + A   L     ++NQ VGDA+SD+L +EA+LA KG  +Q+W  +Y+DLP+R LKVKV DR V+ T   E R + P+ LQD ID L+   R  RSFVRPSGTEDVVRVYAEA TQE+ADALA EVS A +  AGGVGD P
Sbjct:  349 CTKTGVKHLHHAAQEFDVGVYFEANGHGTVLFSREAEEKIQQLASDTNIIDERKKAALLLQNTINIINQTVGDAISDMLLIEAILAIKGMTVQQWDTIYSDLPNRQLKVKVSDRRVIETTDAERRAVTPAGLQDAIDGLVKKYRQARSFVRPSGTEDVVRVYAEAETQESADALAHEVSLAVYSLAGGVGDEP 541          
BLAST of mRNA_M-pyrifera_M_contig82789.19345.1 vs. uniprot
Match: A0A1S3IPZ1_LINUN (Phosphoacetylglucosamine mutase n=2 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3IPZ1_LINUN)

HSP 1 Score: 211 bits (536), Expect = 3.890e-62
Identity = 109/196 (55.61%), Postives = 142/196 (72.45%), Query Frame = 1
Query:   16 CVCAQVKHLHHAAMDFDVGVYFEANGHGTVLLSPELQERLRQGAADDAGSDESRAACRRLLAAAQLLNQAVGDAMSDLLFVEAVLASKGWGLQEWSDLYTDLPSRMLKVKVEDRSVVVTNADETRCLEPSSLQDEIDRLMAAR-DGRSFVRPSGTEDVVRVYAEAPTQEAADALAAEVSGATHDHAGGVGDRPSGP 600
            CV   VKHLHH A+++D+GVYFEANGHGTV+ S ++Q+ +   A D + S +   A RRLL    L+NQ VGDA+SDLL VE +L SKGW +++W+D YTDLP+R LKVKV+DR+V+ T   E +   P  LQ+ ID L+    DGR+FVRPSGTED+VRVYAEA TQ+ AD LA EVS   ++ AGGVG++P+ P
Sbjct:  352 CVPTGVKHLHHKALEYDIGVYFEANGHGTVVFSEKIQDMVLMAANDSSLSKDQEHAARRLLWIIGLINQTVGDAISDLLLVETILHSKGWSIEDWNDAYTDLPNRQLKVKVKDRTVIQTTDAERKTTSPKGLQEAIDALVEKYPDGRAFVRPSGTEDIVRVYAEAETQKNADMLAHEVSVEVYNLAGGVGEKPTPP 547          
BLAST of mRNA_M-pyrifera_M_contig82789.19345.1 vs. uniprot
Match: A0A2D0T4P6_ICTPU (Phosphoacetylglucosamine mutase n=8 Tax=Siluroidei TaxID=1489793 RepID=A0A2D0T4P6_ICTPU)

HSP 1 Score: 210 bits (534), Expect = 7.220e-62
Identity = 112/197 (56.85%), Postives = 139/197 (70.56%), Query Frame = 1
Query:    4 LTRVCVCAQVKHLHHAAMDFDVGVYFEANGHGTVLLSPELQERLRQGAADDAGSDESRAACRRLLAAAQLLNQAVGDAMSDLLFVEAVLASKGWGLQEWSDLYTDLPSRMLKVKVEDRSVVVTNADETRCLEPSSLQDEIDRLMAA-RDGRSFVRPSGTEDVVRVYAEAPTQEAADALAAEVSGATHDHAGGVGDRP 591
            +T  C    VKHLHHAA +FD+GVYFEANGHGTVL S + +E+++Q A D   SDE +   + L +   L+NQA GDA+SD+L +EAVLA +G  +QEW  +YTDLP+R LKVKV DR V+ T   E R L P+ LQD ID L+   +  R+FVRPSGTEDVVRVYAEA TQE+ D LA +VS A +  AGGVGD P
Sbjct:  345 VTVCCTKTGVKHLHHAAQEFDIGVYFEANGHGTVLFSKKAEEQIQQLAKDPNASDEKKHMAKLLESTVNLINQATGDAISDMLLIEAVLAIRGMTVQEWDAIYTDLPNRQLKVKVADRRVIDTTDAERRALTPAGLQDSIDALVKKYKQARAFVRPSGTEDVVRVYAEADTQESVDGLAHQVSLAVYQLAGGVGDEP 541          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig82789.19345.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI000CF80CBD1.210e-6356.70phosphoacetylglucosamine mutase-like n=1 Tax=Oryzi... [more]
A0A7S2SUY6_9STRA1.500e-6359.57Phosphoacetylglucosamine mutase n=1 Tax=Rhizochrom... [more]
UPI00186487349.380e-6359.07phosphoacetylglucosamine mutase n=1 Tax=Megalops c... [more]
A0A8K0D5L3_9COLE1.070e-6253.89Uncharacterized protein n=1 Tax=Ignelater luminosu... [more]
A0A418AYT8_9STRA1.880e-6254.74Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A0T6B8G5_9SCAR2.230e-6254.40Phosphoacetylglucosamine mutase n=1 Tax=Oryctes bo... [more]
A0A3B4ZQD2_9TELE3.580e-6258.59Phosphoacetylglucosamine mutase n=3 Tax=Pomacentri... [more]
A0A3Q2CJQ5_CYPVA3.660e-6259.07Phosphoacetylglucosamine mutase n=5 Tax=Cyprinodon... [more]
A0A1S3IPZ1_LINUN3.890e-6255.61Phosphoacetylglucosamine mutase n=2 Tax=Lingula un... [more]
A0A2D0T4P6_ICTPU7.220e-6256.85Phosphoacetylglucosamine mutase n=8 Tax=Siluroidei... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig82789contigM-pyrifera_M_contig82789:1..822 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score213.4
Seed ortholog evalue9.8e-53
Seed eggNOG ortholog144197.XP_008300912.1
Preferred namePGM3
KEGG rclassRC00408
KEGG koko:K01836
KEGG ReactionR08193
KEGG Pathwayko00520,ko01100,ko01130,map00520,map01100,map01130
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0001704,GO:0001707,GO:0002376,GO:0002520,GO:0003674,GO:0003824,GO:0004610,GO:0004614,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006040,GO:0006041,GO:0006047,GO:0006048,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006493,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0007275,GO:0007276,GO:0007283,GO:0007369,GO:0007498,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009226,GO:0009653,GO:0009790,GO:0009888,GO:0009966,GO:0009967,GO:0009987,GO:0010646,GO:0010647,GO:0016853,GO:0016866,GO:0016868,GO:0018130,GO:0019255,GO:0019438,GO:0019538,GO:0019637,GO:0019953,GO:0022414,GO:0023051,GO:0023056,GO:0030097,GO:0032501,GO:0032502,GO:0032504,GO:0034641,GO:0034645,GO:0034654,GO:0036211,GO:0040036,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0044703,GO:0045743,GO:0046349,GO:0046483,GO:0048232,GO:0048332,GO:0048513,GO:0048518,GO:0048522,GO:0048534,GO:0048583,GO:0048584,GO:0048598,GO:0048609,GO:0048646,GO:0048729,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0051704,GO:0055086,GO:0060438,GO:0060541,GO:0065007,GO:0070085,GO:0071704,GO:0090287,GO:1901071,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.Catalyzes the conversion of GlcNAc-6-P into GlcNAc-1-P during the synthesis of uridine diphosphate UDP-GlcNAc, a sugar nucleotide critical to multiple glycosylation pathways including protein N- and O-glycosylation
EggNOG OGs38CHB@33154,3BFTW@33208,3CRUW@33213,488ZQ@7711,48W1U@7742,4A2F3@7898,COG1109@1,KOG2537@2759
EC5.4.2.3
COG Functional cat.G
Best tax levelActinopterygii
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons4
Model size600
Cds size600
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig82789.19345.1prot_M-pyrifera_M_contig82789.19345.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig82789 1..822 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816734.591096-CDS-M-pyrifera_M_contig82789:0..1361622816734.591096-CDS-M-pyrifera_M_contig82789:0..136Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig82789 1..136 -
1692278147.136062-CDS-M-pyrifera_M_contig82789:0..1361692278147.136062-CDS-M-pyrifera_M_contig82789:0..136Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig82789 1..136 -
1622816734.6022832-CDS-M-pyrifera_M_contig82789:215..3531622816734.6022832-CDS-M-pyrifera_M_contig82789:215..353Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig82789 216..353 -
1692278147.147932-CDS-M-pyrifera_M_contig82789:215..3531692278147.147932-CDS-M-pyrifera_M_contig82789:215..353Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig82789 216..353 -
1622816734.6143987-CDS-M-pyrifera_M_contig82789:429..5901622816734.6143987-CDS-M-pyrifera_M_contig82789:429..590Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig82789 430..590 -
1692278147.1575541-CDS-M-pyrifera_M_contig82789:429..5901692278147.1575541-CDS-M-pyrifera_M_contig82789:429..590Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig82789 430..590 -
1622816734.6307404-CDS-M-pyrifera_M_contig82789:657..8221622816734.6307404-CDS-M-pyrifera_M_contig82789:657..822Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig82789 658..822 -
1692278147.1690369-CDS-M-pyrifera_M_contig82789:657..8221692278147.1690369-CDS-M-pyrifera_M_contig82789:657..822Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig82789 658..822 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig82789.19345.1

>prot_M-pyrifera_M_contig82789.19345.1 ID=prot_M-pyrifera_M_contig82789.19345.1|Name=mRNA_M-pyrifera_M_contig82789.19345.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=200bp
VLTRVCVCAQVKHLHHAAMDFDVGVYFEANGHGTVLLSPELQERLRQGAA
DDAGSDESRAACRRLLAAAQLLNQAVGDAMSDLLFVEAVLASKGWGLQEW
SDLYTDLPSRMLKVKVEDRSVVVTNADETRCLEPSSLQDEIDRLMAARDG
RSFVRPSGTEDVVRVYAEAPTQEAADALAAEVSGATHDHAGGVGDRPSGP
back to top

mRNA from alignment at M-pyrifera_M_contig82789:1..822-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig82789.19345.1 ID=mRNA_M-pyrifera_M_contig82789.19345.1|Name=mRNA_M-pyrifera_M_contig82789.19345.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=822bp|location=Sequence derived from alignment at M-pyrifera_M_contig82789:1..822- (Macrocystis pyrifera P11B4 male)
GTACTCACCCGCGTCTGCGTGTGTGCACAGGTGAAGCACCTCCACCACGC GGCCATGGACTTTGACGTGGGCGTGTACTTTGAGGCCAACGGCCACGGCA CCGTGCTGCTGTCGCCGGAGCTGCAGGAGCGCCTGCGCCAGGGAGCGGCG GACGATGCTGGCTCGGTACGTTCCAGACCTGATTCTTCCACTCTCCTTCC CCCATGACTCACACACGCACGCATGTTTGCAGGACGAGAGCCGCGCAGCG TGCCGTCGCCTGCTCGCAGCGGCGCAGCTGCTGAACCAGGCTGTGGGTGA CGCCATGAGCGACCTGCTGTTCGTCGAGGCGGTGCTTGCGAGCAAGGGCT GGGGACTGCAGGAGTGGTCTGATCTGTACACCGACCTGCCAAGGTGCGGG ACGCGCGTGTGATCTGCCCTTCCTCGGCAACGCGCCAACCCTCACCACCC TCTCGCCCGTCCCCGACAGCCGCATGCTCAAGGTGAAGGTGGAGGACCGC AGCGTGGTGGTGACGAACGCGGACGAGACTCGGTGCCTCGAGCCGTCTTC GCTGCAGGACGAGATCGATCGCCTCATGGCCGCACGCGACGGCAGGTCGT TCGTCAGGTGCGTTGCATCTGCTGCTCGTGTGCCCCATCGCGCACTTGCA CACTCACACACACGCACACACGCACGCGCTGACCAGGCCGTCTGGCACTG AGGACGTCGTGCGAGTGTACGCGGAGGCGCCCACGCAAGAGGCGGCGGAT GCTCTTGCGGCGGAGGTGTCTGGCGCGACGCACGACCACGCTGGCGGTGT GGGTGATCGCCCGAGCGGCCCT
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig82789:1..822-

>mRNA_M-pyrifera_M_contig82789.19345.1 ID=mRNA_M-pyrifera_M_contig82789.19345.1|Name=mRNA_M-pyrifera_M_contig82789.19345.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1200bp|location=Sequence derived from alignment at M-pyrifera_M_contig82789:1..822- (Macrocystis pyrifera P11B4 male)
GTACTCACCCGCGTCTGCGTGTGTGCACAGGTGAAGCACCTCCACCACGC
GGCCATGGACTTTGACGTGGGCGTGTACTTTGAGGCCAACGGCCACGGCA
CCGTGCTGCTGTCGCCGGAGCTGCAGGAGCGCCTGCGCCAGGGAGCGGCG
GACGATGCTGGCTCGGTACTCACCCGCGTCTGCGTGTGTGCACAGGTGAA
GCACCTCCACCACGCGGCCATGGACTTTGACGTGGGCGTGTACTTTGAGG
CCAACGGCCACGGCACCGTGCTGCTGTCGCCGGAGCTGCAGGAGCGCCTG
CGCCAGGGAGCGGCGGACGATGCTGGCTCGGACGAGAGCCGCGCAGCGTG
CCGTCGCCTGCTCGCAGCGGCGCAGCTGCTGAACCAGGCTGTGGGTGACG
CCATGAGCGACCTGCTGTTCGTCGAGGCGGTGCTTGCGAGCAAGGGCTGG
GGACTGCAGGAGTGGTCTGATCTGTACACCGACCTGCCAAGGACGAGAGC
CGCGCAGCGTGCCGTCGCCTGCTCGCAGCGGCGCAGCTGCTGAACCAGGC
TGTGGGTGACGCCATGAGCGACCTGCTGTTCGTCGAGGCGGTGCTTGCGA
GCAAGGGCTGGGGACTGCAGGAGTGGTCTGATCTGTACACCGACCTGCCA
AGCCGCATGCTCAAGGTGAAGGTGGAGGACCGCAGCGTGGTGGTGACGAA
CGCGGACGAGACTCGGTGCCTCGAGCCGTCTTCGCTGCAGGACGAGATCG
ATCGCCTCATGGCCGCACGCGACGGCAGGTCGTTCGTCAGCCGCATGCTC
AAGGTGAAGGTGGAGGACCGCAGCGTGGTGGTGACGAACGCGGACGAGAC
TCGGTGCCTCGAGCCGTCTTCGCTGCAGGACGAGATCGATCGCCTCATGG
CCGCACGCGACGGCAGGTCGTTCGTCAGGCCGTCTGGCACTGAGGACGTC
GTGCGAGTGTACGCGGAGGCGCCCACGCAAGAGGCGGCGGATGCTCTTGC
GGCGGAGGTGTCTGGCGCGACGCACGACCACGCTGGCGGTGTGGGTGATC
GCCCGAGCGGCCCTGCCGTCTGGCACTGAGGACGTCGTGCGAGTGTACGC
GGAGGCGCCCACGCAAGAGGCGGCGGATGCTCTTGCGGCGGAGGTGTCTG
GCGCGACGCACGACCACGCTGGCGGTGTGGGTGATCGCCCGAGCGGCCCT
back to top