mRNA_M-pyrifera_M_contig109259.1933.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig109259.1933.1 vs. uniprot
Match: A0A2E7KAK0_9PLAN (PDZ domain-containing protein n=6 Tax=Gimesia TaxID=1649453 RepID=A0A2E7KAK0_9PLAN) HSP 1 Score: 401 bits (1030), Expect = 1.810e-136 Identity = 199/201 (99.00%), Postives = 201/201 (100.00%), Query Frame = 1
Query: 1 VRKGQFVVALGNPYAIARDGSPSASWGIVSNFHRYPVPIFKNFLNQELSKKETIHHFGTLLQVDTHLDLGTSGGALLDLDGNLIGVTTSLAALEGYEKSAGYAIPIDPDTRRIIDSLANGLEPEYGFLGITPGTLDRSEANRNLAGAVNLTESSYVQTSGVKQHSPAQQAGLRTGDLILSINGKPLRNELDLMREVGKAGA 603
VRKGQFV+ALGNPYAIARDGSPSASWGIVSNFHRYPVPIFKNFLNQELSKKETIHHFGTLLQVDTHLDLGTSGGALLDLDGNLIGVTTSLAALEGYEKSAGYAIPIDPDTRRIIDSLANGLEPEYGFLGITPGTLDR+EANRNLAGAVNLTESSYVQTSGVKQHSPAQQAGLRTGDLILSINGKPLRNELDLMREVGKAGA
Sbjct: 198 VRKGQFVIALGNPYAIARDGSPSASWGIVSNFHRYPVPIFKNFLNQELSKKETIHHFGTLLQVDTHLDLGTSGGALLDLDGNLIGVTTSLAALEGYEKSAGYAIPIDPDTRRIIDSLANGLEPEYGFLGITPGTLDRNEANRNLAGAVNLTESSYVQTSGVKQHSPAQQAGLRTGDLILSINGKPLRNELDLMREVGKAGA 398
BLAST of mRNA_M-pyrifera_M_contig109259.1933.1 vs. uniprot
Match: A0A518A2J0_9PLAN (Putative periplasmic serine endoprotease DegP-like n=2 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518A2J0_9PLAN) HSP 1 Score: 354 bits (908), Expect = 5.280e-118 Identity = 176/201 (87.56%), Postives = 185/201 (92.04%), Query Frame = 1
Query: 1 VRKGQFVVALGNPYAIARDGSPSASWGIVSNFHRYPVPIFKNFLNQELSKKETIHHFGTLLQVDTHLDLGTSGGALLDLDGNLIGVTTSLAALEGYEKSAGYAIPIDPDTRRIIDSLANGLEPEYGFLGITPGTLDRSEANRNLAGAVNLTESSYVQTSGVKQHSPAQQAGLRTGDLILSINGKPLRNELDLMREVGKAGA 603
VRKGQFV+ALGNPYAIARDGSPSASWGIVSNF RYPVPIFKNFLNQEL+KKETIHHFGTLLQVDTHLDLG+SGGALLDLDG LIGVTTSLAALEGYEKSAGYAIP+DP+TRRII SLA+GLE EYGFLGITP T+DRSEANRN+A VNL E +YVQ VKQHSPAQQAGL DLILSINGK LRNELDLMREVGKAGA
Sbjct: 199 VRKGQFVIALGNPYAIARDGSPSASWGIVSNFQRYPVPIFKNFLNQELAKKETIHHFGTLLQVDTHLDLGSSGGALLDLDGKLIGVTTSLAALEGYEKSAGYAIPLDPETRRIIQSLASGLEAEYGFLGITPNTVDRSEANRNVASIVNLKEPAYVQAGSVKQHSPAQQAGLLPSDLILSINGKELRNELDLMREVGKAGA 399
BLAST of mRNA_M-pyrifera_M_contig109259.1933.1 vs. uniprot
Match: A0A3D3R618_9PLAN (PDZ domain-containing protein (Fragment) n=1 Tax=Gimesia maris TaxID=122 RepID=A0A3D3R618_9PLAN) HSP 1 Score: 322 bits (824), Expect = 8.510e-107 Identity = 157/201 (78.11%), Postives = 176/201 (87.56%), Query Frame = 1
Query: 1 VRKGQFVVALGNPYAIARDGSPSASWGIVSNFHRYPVPIFKNFLNQELSKKETIHHFGTLLQVDTHLDLGTSGGALLDLDGNLIGVTTSLAALEGYEKSAGYAIPIDPDTRRIIDSLANGLEPEYGFLGITPGTLDRSEANRNLAGAVNLTESSYVQTSGVKQHSPAQQAGLRTGDLILSINGKPLRNELDLMREVGKAGA 603
V+KGQFV+ALGNPYAIARDGSPSASWGI+SNFHRYPVPIFK+FLNQE++K+ET+HHFGTLLQVDTHLDLGTSGGALLDL+GNLIGVTT+LAALEGYEKS GYAIPID T RIIDSLA GLE EYGFLGI PGTLDR + + GAV L YV+ S VKQHSPAQ AG++ DLILS+NG+ L ++LDLMREVGKAGA
Sbjct: 200 VKKGQFVIALGNPYAIARDGSPSASWGIISNFHRYPVPIFKHFLNQEIAKEETLHHFGTLLQVDTHLDLGTSGGALLDLEGNLIGVTTALAALEGYEKSVGYAIPIDQSTLRIIDSLAAGLEAEYGFLGIEPGTLDRGQVRNSFPGAVGLDAPFYVEASRVKQHSPAQLAGMQPHDLILSVNGQKLTHDLDLMREVGKAGA 400
BLAST of mRNA_M-pyrifera_M_contig109259.1933.1 vs. uniprot
Match: A6CF30_9PLAN (Protease DO n=9 Tax=Planctomycetaceae TaxID=126 RepID=A6CF30_9PLAN) HSP 1 Score: 320 bits (821), Expect = 2.090e-105 Identity = 157/201 (78.11%), Postives = 175/201 (87.06%), Query Frame = 1
Query: 1 VRKGQFVVALGNPYAIARDGSPSASWGIVSNFHRYPVPIFKNFLNQELSKKETIHHFGTLLQVDTHLDLGTSGGALLDLDGNLIGVTTSLAALEGYEKSAGYAIPIDPDTRRIIDSLANGLEPEYGFLGITPGTLDRSEANRNLAGAVNLTESSYVQTSGVKQHSPAQQAGLRTGDLILSINGKPLRNELDLMREVGKAGA 603
V+KGQFV+ALGNPYAIARDGSPSASWGI+SNFHRYPVPIFK+FLNQE++K+ET+HHFGTLLQVDTHLDLGTSGGALLDL+GNLIGVTT+LAALEGYEKS GYAIPID T RIIDSLA GLE EYGFLGI PGTLDR + + GAV L YV+ S VKQHSPAQ AG+ DLILS+NG+ L ++LDLMREVGKAGA
Sbjct: 154 VKKGQFVIALGNPYAIARDGSPSASWGIISNFHRYPVPIFKHFLNQEIAKEETLHHFGTLLQVDTHLDLGTSGGALLDLEGNLIGVTTALAALEGYEKSVGYAIPIDQSTLRIIDSLAAGLEAEYGFLGIEPGTLDRGQVRNSFPGAVGLDAPFYVEASRVKQHSPAQLAGMLPHDLILSVNGQKLTHDLDLMREVGKAGA 354
BLAST of mRNA_M-pyrifera_M_contig109259.1933.1 vs. uniprot
Match: A0A517X7J1_9PLAN (Periplasmic serine endoprotease DegP n=4 Tax=Gimesia TaxID=1649453 RepID=A0A517X7J1_9PLAN) HSP 1 Score: 320 bits (821), Expect = 7.890e-105 Identity = 157/201 (78.11%), Postives = 175/201 (87.06%), Query Frame = 1
Query: 1 VRKGQFVVALGNPYAIARDGSPSASWGIVSNFHRYPVPIFKNFLNQELSKKETIHHFGTLLQVDTHLDLGTSGGALLDLDGNLIGVTTSLAALEGYEKSAGYAIPIDPDTRRIIDSLANGLEPEYGFLGITPGTLDRSEANRNLAGAVNLTESSYVQTSGVKQHSPAQQAGLRTGDLILSINGKPLRNELDLMREVGKAGA 603
V+KGQFV+ALGNPYAIARDGSPSASWGI+SNFHRYPVPIFK+FLNQE++K+ET+HHFGTLLQVDTHLDLGTSGGALLDL+GNLIGVTT+LAALEGYEKS GYAIPID T RIIDSLA GLE EYGFLGI PGTLDR + + GAV L YV+ S VKQHSPAQ AG+ DLILS+NG+ L ++LDLMREVGKAGA
Sbjct: 200 VKKGQFVIALGNPYAIARDGSPSASWGIISNFHRYPVPIFKHFLNQEIAKEETLHHFGTLLQVDTHLDLGTSGGALLDLEGNLIGVTTALAALEGYEKSVGYAIPIDQSTLRIIDSLAAGLEAEYGFLGIEPGTLDRGQVRNSFPGAVGLDAPFYVEASRVKQHSPAQLAGMLPHDLILSVNGQKLTHDLDLMREVGKAGA 400
BLAST of mRNA_M-pyrifera_M_contig109259.1933.1 vs. uniprot
Match: A0A518I8A6_9PLAN (Putative periplasmic serine endoprotease DegP-like n=1 Tax=Gimesia fumaroli TaxID=2527976 RepID=A0A518I8A6_9PLAN) HSP 1 Score: 305 bits (781), Expect = 8.510e-99 Identity = 152/201 (75.62%), Postives = 170/201 (84.58%), Query Frame = 1
Query: 1 VRKGQFVVALGNPYAIARDGSPSASWGIVSNFHRYPVPIFKNFLNQELSKKETIHHFGTLLQVDTHLDLGTSGGALLDLDGNLIGVTTSLAALEGYEKSAGYAIPIDPDTRRIIDSLANGLEPEYGFLGITPGTLDRSEANRNLAGAVNLTESSYVQTSGVKQHSPAQQAGLRTGDLILSINGKPLRNELDLMREVGKAGA 603
+RKGQFV+ALGNPYAIARDGSPSASWGIVSNFHRYPVP+FKNFLNQEL K+ET+HHFGTLLQVDTHLDLGTSGGALLDLDGNLIGVTTSLAALEGYEKS GYAIPID T RII+ LA G+E EYGFLGI P T+++++A A L E YV+ VKQ+SPAQ AG+ GDLILSI+G+ L + DLMREVGKAGA
Sbjct: 200 IRKGQFVIALGNPYAIARDGSPSASWGIVSNFHRYPVPVFKNFLNQELDKEETLHHFGTLLQVDTHLDLGTSGGALLDLDGNLIGVTTSLAALEGYEKSTGYAIPIDKATLRIINRLAAGMEAEYGFLGIYPRTIEQNQARHLFARNSVLQEPYYVKAESVKQYSPAQIAGMLPGDLILSIDGQKLTRDFDLMREVGKAGA 400
BLAST of mRNA_M-pyrifera_M_contig109259.1933.1 vs. uniprot
Match: A0A517RBN3_9PLAN (Periplasmic serine endoprotease DegP n=1 Tax=Gimesia alba TaxID=2527973 RepID=A0A517RBN3_9PLAN) HSP 1 Score: 305 bits (780), Expect = 1.200e-98 Identity = 153/201 (76.12%), Postives = 167/201 (83.08%), Query Frame = 1
Query: 1 VRKGQFVVALGNPYAIARDGSPSASWGIVSNFHRYPVPIFKNFLNQELSKKETIHHFGTLLQVDTHLDLGTSGGALLDLDGNLIGVTTSLAALEGYEKSAGYAIPIDPDTRRIIDSLANGLEPEYGFLGITPGTLDRSEANRNLAGAVNLTESSYVQTSGVKQHSPAQQAGLRTGDLILSINGKPLRNELDLMREVGKAGA 603
+RKGQFV+ALGNPYAIARDGSPSASWGIVSNFHRYPVPIFKNFLNQEL K+ET+HHFGTLLQVDTHLDLGTSGGALLDLDGNLIGVTTSLAALEGYEKS G+AIPID T RII+SLA G+EPEYGFLGI P T+++S+A L E YV VK HSPAQ AG+ DLILSI G+ L + DLMREVGKAGA
Sbjct: 200 IRKGQFVIALGNPYAIARDGSPSASWGIVSNFHRYPVPIFKNFLNQELDKEETLHHFGTLLQVDTHLDLGTSGGALLDLDGNLIGVTTSLAALEGYEKSTGFAIPIDQATLRIINSLAAGMEPEYGFLGIHPLTIEQSQARHLFTRNTVLLEPYYVVAKSVKPHSPAQLAGMLPDDLILSIEGQKLTRDFDLMREVGKAGA 400
BLAST of mRNA_M-pyrifera_M_contig109259.1933.1 vs. uniprot
Match: A0A517W190_9PLAN (Putative periplasmic serine endoprotease DegP-like n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517W190_9PLAN) HSP 1 Score: 300 bits (767), Expect = 9.710e-97 Identity = 146/201 (72.64%), Postives = 171/201 (85.07%), Query Frame = 1
Query: 1 VRKGQFVVALGNPYAIARDGSPSASWGIVSNFHRYPVPIFKNFLNQELSKKETIHHFGTLLQVDTHLDLGTSGGALLDLDGNLIGVTTSLAALEGYEKSAGYAIPIDPDTRRIIDSLANGLEPEYGFLGITPGTLDRSEANRNLAGAVNLTESSYVQTSGVKQHSPAQQAGLRTGDLILSINGKPLRNELDLMREVGKAGA 603
+RKGQFV+ALGNPYAIARDGSPSASWGI+SNFHR+PVPI K+F +QE++K+ET+HHFGTLLQVDT LDLGTSGGALLDLDGNLIG+TTSLAAL+GYEKS GYAIPID T+RII+SL+ GLE EYGFLGI P T++R+ A ++ G+ L + YV VKQHSPA AG++ DLILSINGK L N L+LMREVGKAGA
Sbjct: 200 IRKGQFVIALGNPYAIARDGSPSASWGILSNFHRFPVPIRKHFFDQEIAKEETLHHFGTLLQVDTRLDLGTSGGALLDLDGNLIGITTSLAALDGYEKSTGYAIPIDKATKRIINSLSAGLEAEYGFLGIQPETIERNRARHSIPGSSALQDPFYVSAVNVKQHSPAHLAGMQPRDLILSINGKKLTNHLELMREVGKAGA 400
BLAST of mRNA_M-pyrifera_M_contig109259.1933.1 vs. uniprot
Match: A0A350K7I2_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A350K7I2_9PLAN) HSP 1 Score: 266 bits (679), Expect = 2.480e-86 Identity = 131/173 (75.72%), Postives = 148/173 (85.55%), Query Frame = 1
Query: 85 VSNFHRYPVPIFKNFLNQELSKKETIHHFGTLLQVDTHLDLGTSGGALLDLDGNLIGVTTSLAALEGYEKSAGYAIPIDPDTRRIIDSLANGLEPEYGFLGITPGTLDRSEANRNLAGAVNLTESSYVQTSGVKQHSPAQQAGLRTGDLILSINGKPLRNELDLMREVGKAGA 603
+SNFHRYPVPIFK+FLNQE++K+ET+HHFGTLLQVDTHLDLGTSGGALLDL+GNLIGVTT+LAALEGYEKS GYAIPID T RIIDSLA GLE EYGFLGI PGTLDR + + GAV L YV+ S VKQHSPAQ AG++ DLILS+NG+ L ++LDLMREVGKAGA
Sbjct: 1 MSNFHRYPVPIFKHFLNQEIAKEETLHHFGTLLQVDTHLDLGTSGGALLDLEGNLIGVTTALAALEGYEKSVGYAIPIDQSTLRIIDSLAAGLEAEYGFLGIEPGTLDRGQVRNSFPGAVGLDAPFYVEASRVKQHSPAQLAGMQPHDLILSVNGQKLSHDLDLMREVGKAGA 173
BLAST of mRNA_M-pyrifera_M_contig109259.1933.1 vs. uniprot
Match: A0A3B1D4T1_9ZZZZ (PDZ domain-containing protein n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B1D4T1_9ZZZZ) HSP 1 Score: 215 bits (547), Expect = 5.740e-64 Identity = 117/199 (58.79%), Postives = 142/199 (71.36%), Query Frame = 1
Query: 4 RKGQFVVALGNPYAIARDGSPSASWGIVSNFHRYPVPIFKNFLNQELSKKETIHHFGTLLQVDTHLDLGTSGGALLDLDGNLIGVTTSLAALEGYEKSAGYAIPIDPDTRRIIDSLANGLEPEYGFLGITPGTLDRSEANRNLAGAVNLTESSYVQTSGVKQHSPAQQAGLRTGDLILSINGKPLRNELDLMREVGKAG 600
RKG FV+ALGNPYAI +DGS SASWG++SN R P P + E KKETIHH+GTLLQVDT L+LGTSGGALL+L G LIG+TTSLAALEGYEKSAGYAIP++ TRR IDSLA G E EYGFLGITP SE RNL+ + ++S V SPA++ GLR GD++LS+N + + LM ++G+ G
Sbjct: 199 RKGTFVIALGNPYAIGQDGSASASWGMISNIARRPAPAGSPN-DAETRKKETIHHYGTLLQVDTRLNLGTSGGALLNLKGELIGITTSLAALEGYEKSAGYAIPLNAATRRAIDSLAKGHEVEYGFLGITPWDFLPSEM-RNLS--LRYKQASAAVVGDVFPKSPAEKGGLRRGDVVLSVNDQVVLGRSKLMLKIGELG 393 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig109259.1933.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig109259.1933.1 >prot_M-pyrifera_M_contig109259.1933.1 ID=prot_M-pyrifera_M_contig109259.1933.1|Name=mRNA_M-pyrifera_M_contig109259.1933.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=201bp VRKGQFVVALGNPYAIARDGSPSASWGIVSNFHRYPVPIFKNFLNQELSKback to top mRNA from alignment at M-pyrifera_M_contig109259:3..605+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig109259.1933.1 ID=mRNA_M-pyrifera_M_contig109259.1933.1|Name=mRNA_M-pyrifera_M_contig109259.1933.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=603bp|location=Sequence derived from alignment at M-pyrifera_M_contig109259:3..605+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig109259:3..605+ >mRNA_M-pyrifera_M_contig109259.1933.1 ID=mRNA_M-pyrifera_M_contig109259.1933.1|Name=mRNA_M-pyrifera_M_contig109259.1933.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1206bp|location=Sequence derived from alignment at M-pyrifera_M_contig109259:3..605+ (Macrocystis pyrifera P11B4 male)back to top |