prot_M-pyrifera_M_contig82336.19256.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig82336.19256.1
Unique Nameprot_M-pyrifera_M_contig82336.19256.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length155
Homology
BLAST of mRNA_M-pyrifera_M_contig82336.19256.1 vs. uniprot
Match: D8LEB1_ECTSI (Utp13 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEB1_ECTSI)

HSP 1 Score: 215 bits (547), Expect = 8.200e-62
Identity = 113/176 (64.20%), Postives = 133/176 (75.57%), Query Frame = 0
Query:    1 LCTSSKDRTCLLWDLELGVPVVRWSGHADAVGAVAASRRPGPWSTTASSSSSSTGAFVVSGAADRTIQRWDVPCRPLAALEQQARDSRAVA---------------------------------TARRSVRGHEKDVNCLAVSPDDAVVASASQDRTVKLWKSSDLELLGVLKGHK 143
            LCTSSKDRTCLLW+++LGVPVVRWSGHAD+VGAVAASR+PGPW+++++S++    AFVVSGAADRT+QRWDVPCRPLAALE  ARDSR  A                                 TARRSVR HE+D+NC+AVSP+DAVVASASQDRT+KLWK++DLEL GVLKGHK
Sbjct:  464 LCTSSKDRTCLLWNVDLGVPVVRWSGHADSVGAVAASRKPGPWNSSSTSAAGGAAAFVVSGAADRTLQRWDVPCRPLAALEGAARDSREAAAEVAXXXXXXXXXXXXXXXXXTGVWTPPAPLLETARRSVRAHEQDINCVAVSPNDAVVASASQDRTIKLWKAADLELTGVLKGHK 639          
BLAST of mRNA_M-pyrifera_M_contig82336.19256.1 vs. uniprot
Match: A0A7S2W0N0_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2W0N0_9STRA)

HSP 1 Score: 122 bits (306), Expect = 2.420e-29
Identity = 64/148 (43.24%), Postives = 93/148 (62.84%), Query Frame = 0
Query:    1 LCTSSKDRTCLLWDLELGVPVVRWSGHADAVGAVAASRRPGPWSTTASSSSSSTGAFVVSGAADRTIQRWDVP-CRPLAALEQQARDSRAVATARRSVRGHEKDVNCLAVSPDDAVVASASQDRTVKLWKSSDLELLGVLKGHKRGVW 147
            LCT+ KD+T  LWD+  G  +    GH +A+GA A SR+ G +     S+ +  GAF V+ + DRTI+RW++P    L  +  +      ++T   S R HEKD+N ++V+P+D++VA+ SQD+TVKLW S D  L G L GHKRG+W
Sbjct:  598 LCTAGKDKTMRLWDISTGTCIGMAEGHTEAIGATALSRKLGRYDVAGKSAKNGAGAFAVTASKDRTIKRWNLPGASALKKINDEGETVLELSTFV-SARAHEKDINIVSVAPNDSLVATGSQDKTVKLWNSVDFTLKGTLSGHKRGIW 744          
BLAST of mRNA_M-pyrifera_M_contig82336.19256.1 vs. uniprot
Match: A0A7S0PX60_9STRA (Hypothetical protein n=1 Tax=Asterionellopsis glacialis TaxID=33640 RepID=A0A7S0PX60_9STRA)

HSP 1 Score: 115 bits (289), Expect = 3.910e-27
Identity = 64/150 (42.67%), Postives = 96/150 (64.00%), Query Frame = 0
Query:    1 LCTSSKDRTCLLWDLELGVPVVRWSGHADAVGAVAASRRPGPWSTTASSSSSSTGAFVVSGAADRTIQRWDVPCRP---LAALEQQARDSRAVATARRSVRGHEKDVNCLAVSPDDAVVASASQDRTVKLWKSSDLELLGVLKGHKRGVW 147
            L T  KD+T  LW LE    +   +GH +A+GA A SR+ G +     ++ +  G+F V+ + DRT++RW++P        AL +   + RA  +A    R HEKD+N ++V+P+D++VA+ SQD+TVKLW+S+DL L G LKGH+RGVW
Sbjct:  109 LATCGKDKTMRLWHLETQRCIGVATGHTEAIGAAALSRKVGRYDVKGKAAINGGGSFAVTASKDRTLKRWNLPGSDDLDKCALSEDPLELRAFVSA----RAHEKDINIISVAPNDSLVATGSQDKTVKLWRSTDLTLQGTLKGHRRGVW 254          
BLAST of mRNA_M-pyrifera_M_contig82336.19256.1 vs. uniprot
Match: A0A1Z5J9L8_FISSO (U3 small nucleolar RNA-associated protein 13 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J9L8_FISSO)

HSP 1 Score: 111 bits (277), Expect = 1.910e-25
Identity = 60/151 (39.74%), Postives = 97/151 (64.24%), Query Frame = 0
Query:    1 LCTSSKDRTCLLWDLELGVPVVRWSGHADAVGAVAASRRPGPWSTTASSSSSSTGAFVVSGAADRTIQRWDVPCRPLAALEQQA-RDSRAVATARRSVRGHEKDVNCLAVSPDDAVVASASQDRTVKLWKSSDLELLGVLKGHKRGVWKVR 150
            L T  KD+   +W  E    V   +GH +AVGAVA S++ G +     ++ +  GAF+VS +AD+T++RW++P    + L + A  +  A   A  S R H+KD+N ++V+P+D+ +A+ SQD+T K+W+S+DL L+  LKGH+RGVW+ +
Sbjct:  521 LATCGKDKQVRIWHTERQKSVAIATGHTEAVGAVAFSQKLGRYQVRGKAADNGGGAFIVSVSADKTLKRWNLP--GSSDLNELAFNEDEATLHAFLSTRAHDKDINTVSVAPNDSYIATGSQDKTAKIWRSTDLSLVATLKGHRRGVWECQ 669          
BLAST of mRNA_M-pyrifera_M_contig82336.19256.1 vs. uniprot
Match: A0A3N4M4D1_9PEZI (WD40 repeat-like protein n=1 Tax=Terfezia boudieri ATCC MYA-4762 TaxID=1051890 RepID=A0A3N4M4D1_9PEZI)

HSP 1 Score: 110 bits (274), Expect = 4.780e-25
Identity = 65/159 (40.88%), Postives = 97/159 (61.01%), Query Frame = 0
Query:    1 LCTSSKDRTCLLWDLELG----VPVVRWSGHADAVGAVAASRRPGPWSTTASSSSSSTGAFVVSGAADRTIQRWDVPCRPLAALEQQARDSRAVATARRSV---RGHEKDVNCLAVSPDDAVVASASQDRTVKLWKSSDLELLGVLKGHKRGVWKVREA 152
            L + +KD    LW ++         V+++GHA+++GA+A  R        ASSSSS    F+++G+ DRT+++WD+P             + AV  A R+V   + H+KD+N + VSPDD + ASASQD+TVK+W   + E+LGVL+GH+RGVW VR A
Sbjct:  415 LASGAKDNDARLWKIDADNNSFTCYVKFTGHAESIGAIALPR--------ASSSSSGAPKFLLTGSQDRTVKKWDIP------------QAGAVKKAPRAVYTRKAHDKDINSIDVSPDDTLFASASQDKTVKIWSLVEGEVLGVLRGHRRGVWSVRFA 553          
BLAST of mRNA_M-pyrifera_M_contig82336.19256.1 vs. uniprot
Match: A0A7S4SA35_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4SA35_9STRA)

HSP 1 Score: 106 bits (264), Expect = 1.080e-23
Identity = 59/155 (38.06%), Postives = 91/155 (58.71%), Query Frame = 0
Query:    1 LCTSSKDRTCLLWDLELGVPVVRWSGHADAVGAVAASRRPGPWSTTASSSSSSTGAFVVSGAADRTIQRWDVPCRPLAALEQQARDSRAVATARR--------SVRGHEKDVNCLAVSPDDAVVASASQDRTVKLWKSSDLELLGVLKGHKRGVW 147
            L T  KD+T  LW L     V   +GH +A+GA + SR+   +     ++ +  GAF+V+ + DRT++RW  P     ++E        +A+ +         S R HEKD+N ++++P+D+++A+ SQD+TVKLW+S DL L   LKGHKRGVW
Sbjct:  600 LATCGKDKTMRLWHLGTNQCVAVATGHTEAIGATSLSRKVVRYEVGGKAAKNGGGAFIVTASKDRTMKRWSFP----GSIELNKHAETELASGKEPLALSVIGSARAHEKDINIVSIAPNDSLIATGSQDKTVKLWRSKDLTLQVTLKGHKRGVW 750          
BLAST of mRNA_M-pyrifera_M_contig82336.19256.1 vs. uniprot
Match: A0A3N4KXN1_9PEZI (WD40 repeat-like protein n=3 Tax=Morchella TaxID=5193 RepID=A0A3N4KXN1_9PEZI)

HSP 1 Score: 105 bits (263), Expect = 1.430e-23
Identity = 62/154 (40.26%), Postives = 93/154 (60.39%), Query Frame = 0
Query:    1 LCTSSKDRTCLLWDLELGVPVV----RWSGHADAVGAVAASRRPGPWSTTASSSSSSTGAFVVSGAADRTIQRWDVPCRPLAALEQQARDSRAVATARRSVRGHEKDVNCLAVSPDDAVVASASQDRTVKLWKSSDLELLGVLKGHKRGVWKVR 150
            L T  KD    LW ++          R+ GHA+++GA+A SR   P + + ++ S +   FV++G+ DRTI+RWD+P           + ++A+ T     + HEKD+N + VSPDD + ASASQD+TVK+W   + E LGVL+GH+RGVW V+
Sbjct:  416 LATGGKDNEARLWHIDGDKSEFTCHSRFVGHAESIGAIALSRAV-PQAESKAAKSFAPPKFVITGSQDRTIKRWDIPA--------PGKKAKAMYTR----KAHEKDINAIDVSPDDELFASASQDKTVKIWSVQEGEALGVLRGHRRGVWSVK 556          
BLAST of mRNA_M-pyrifera_M_contig82336.19256.1 vs. uniprot
Match: A0A1U7LPK9_NEOID (Putative U3 small nucleolar RNA-associated protein 13 n=1 Tax=Neolecta irregularis (strain DAH-3) TaxID=1198029 RepID=A0A1U7LPK9_NEOID)

HSP 1 Score: 105 bits (262), Expect = 2.040e-23
Identity = 64/157 (40.76%), Postives = 87/157 (55.41%), Query Frame = 0
Query:    1 LCTSSKDRTCLLWDLELGVPVVR-----WSGHADAVGAVAASRRPGPWSTTASSSSSSTGAFVVSGAADRTIQRWDVPCRPLAALEQQARDSRAVATARRSVRGHEKDVNCLAVSPDDAVVASASQDRTVKLWKSSDLELLGVLKGHKRGVWKVREA 152
            L T SKD +  LW LE G  V       ++GHA+++GA+  S+            ++    FV++G+ DRTI+RWD+             D +    A  + + HEKD+N + V+ DD V ASASQDRTVK+W + D EL G LKGHKRGVW  R A
Sbjct:  387 LATGSKDNSAKLWKLEFGKTVEATCVSTFTGHAESIGAIGLSK------------TTQKPKFVLTGSQDRTIKRWDIS------------DIKNTNRALYTQKAHEKDINAIDVASDDTVFASASQDRTVKIWAAIDGELKGTLKGHKRGVWSARFA 519          
BLAST of mRNA_M-pyrifera_M_contig82336.19256.1 vs. uniprot
Match: H6BM64_EXODN (Utp13 domain-containing protein n=1 Tax=Exophiala dermatitidis (strain ATCC 34100 / CBS 525.76 / NIH/UT8656) TaxID=858893 RepID=H6BM64_EXODN)

HSP 1 Score: 104 bits (259), Expect = 4.990e-23
Identity = 61/154 (39.61%), Postives = 89/154 (57.79%), Query Frame = 0
Query:    1 LCTSSKDRTCLLWDLELGVP----VVRWSGHADAVGAVAASRRPGPWSTTASSSSSSTGAFVVSGAADRTIQRWDVPCRPLAALEQQARDSRAVATARRSVRGHEKDVNCLAVSPDDAVVASASQDRTVKLWKSSDLELLGVLKGHKRGVWKVR 150
            L T +KD T  LW L+           ++GHA+++GA+A  R P    T AS  +    AF+++G+ D+TI+RWD         + +  + +A A A  +   HEKD+N L VSP   + ASASQDRT+K+W   D  + G+L+GHKRGVW +R
Sbjct:  429 LATGAKDNTARLWRLDPSTSSYTCFAMFAGHAESLGAIALPRSPPASGTAASDPARHPPAFLLTGSQDKTIKRWDTSKMK---YDPKLTEPQAAAKALFTRVAHEKDINALDVSPTAPLFASASQDRTIKIWSLEDGSVTGILRGHKRGVWSIR 579          
BLAST of mRNA_M-pyrifera_M_contig82336.19256.1 vs. uniprot
Match: B7FX96_PHATC (Predicted protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FX96_PHATC)

HSP 1 Score: 103 bits (257), Expect = 9.120e-23
Identity = 60/142 (42.25%), Postives = 91/142 (64.08%), Query Frame = 0
Query:    1 LCTSSKDRTCLLWDLELGVPVVRWSGHADAVGAVAASRRPGPWSTTASSSSSSTGAFVVSGAADRTIQRWDVPCRPLAALEQQARDSRAVAT-ARRSVRGHEKDVNCLAVSPDDAVVASASQDRTVKLWKSSDLELLGVLKG 141
            + T  KD+T  LW L     V   +GH +A+G+ A SR+ G +     ++++  G+FVV+ + DRT++RW++P   +A LE+   D       A  SVR HEKD+N ++V+P+D++VA+ SQD+TVKLWKS+DL L   LKG
Sbjct:  403 VATCGKDKTMRLWSLASQSSVAVATGHTEAIGSTALSRKQGRYDVRGKAATNGGGSFVVTVSMDRTLKRWNLP--GVADLERLGEDREETPLKAFVSVRAHEKDINIVSVAPNDSLVATGSQDKTVKLWKSNDLSLQATLKG 542          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig82336.19256.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEB1_ECTSI8.200e-6264.20Utp13 domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A7S2W0N0_9STRA2.420e-2943.24Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S0PX60_9STRA3.910e-2742.67Hypothetical protein n=1 Tax=Asterionellopsis glac... [more]
A0A1Z5J9L8_FISSO1.910e-2539.74U3 small nucleolar RNA-associated protein 13 n=2 T... [more]
A0A3N4M4D1_9PEZI4.780e-2540.88WD40 repeat-like protein n=1 Tax=Terfezia boudieri... [more]
A0A7S4SA35_9STRA1.080e-2338.06Hypothetical protein n=3 Tax=Ditylum brightwellii ... [more]
A0A3N4KXN1_9PEZI1.430e-2340.26WD40 repeat-like protein n=3 Tax=Morchella TaxID=5... [more]
A0A1U7LPK9_NEOID2.040e-2340.76Putative U3 small nucleolar RNA-associated protein... [more]
H6BM64_EXODN4.990e-2339.61Utp13 domain-containing protein n=1 Tax=Exophiala ... [more]
B7FX96_PHATC9.120e-2342.25Predicted protein (Fragment) n=2 Tax=Phaeodactylum... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 1..15
score: 35.45
coord: 116..130
score: 34.54
coord: 58..72
score: 34.64
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 17..71
e-value: 3.6
score: 13.5
coord: 90..129
e-value: 1.5E-8
score: 44.5
IPR001680WD40 repeatPFAMPF00400WD40coord: 23..71
e-value: 0.036
score: 15.0
coord: 95..129
e-value: 1.5E-9
score: 38.3
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 97..138
score: 14.686
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..95
e-value: 7.1E-11
score: 43.5
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 96..150
e-value: 1.5E-16
score: 62.5
NoneNo IPR availablePANTHERPTHR19854:SF15TRANSDUCIN BETA-LIKE PROTEIN 3coord: 1..149
NoneNo IPR availablePANTHERPTHR19854TRANSDUCIN BETA-LIKE 3coord: 1..149
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 1..15
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 1..155
score: 18.985
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 1..149

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig82336contigM-pyrifera_M_contig82336:60..689 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig82336.19256.1mRNA_M-pyrifera_M_contig82336.19256.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig82336 60..689 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig82336.19256.1 ID=prot_M-pyrifera_M_contig82336.19256.1|Name=mRNA_M-pyrifera_M_contig82336.19256.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=155bp
LCTSSKDRTCLLWDLELGVPVVRWSGHADAVGAVAASRRPGPWSTTASSS
SSSTGAFVVSGAADRTIQRWDVPCRPLAALEQQARDSRAVATARRSVRGH
EKDVNCLAVSPDDAVVASASQDRTVKLWKSSDLELLGVLKGHKRGVWKVR
EAGGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020472G-protein_beta_WD-40_rep
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf