mRNA_M-pyrifera_M_contig81851.19152.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig81851.19152.1 vs. uniprot
Match: A0A4R7HY29_9ACTN (Multidrug efflux pump subunit AcrB n=1 Tax=Ilumatobacter fluminis TaxID=467091 RepID=A0A4R7HY29_9ACTN) HSP 1 Score: 360 bits (925), Expect = 2.960e-115 Identity = 197/257 (76.65%), Postives = 218/257 (84.82%), Query Frame = 1 Query: 1 ATGESTTITAARISTDGQILRVDGEREIEVRAAFSNDDLTNNLTATEDFVTSEFDAAELERRGLPADSLGFDYGQESDNQEDFASLGVALIVALGLMLLLLVVQFRSLVQPLLILLAIPFSFFGVFSALSLTGNPISFFVAVGFIALVGVVVNNTILLVDAANQGRRDGLRPGAAIQQAVERRFRPLVATTITTVVGLLPLALSDPFWEALSFTLIGGLISSTIVVLLAFPVFYLIIEKPRTWVRNTVRSRMGRPLV 771 ATG+ T I A +STDGQI RVDG R+IEVRA FSNDDLTNNL ATE V + AEL GLPAD++ FDYGQESDNQ+DFASLG A+IVAL LML+LLVVQFRS+VQPLLI LA+PFSF GVF+ALSL+ NPISFFV VGFIAL+GVVVNNTILLVDAANQ RR GLRPG AI +AVERRFRPLVATTITTVVGL PLALSDPFWE+L FTLIGGL+SSTI+VL AFPVFYL +EK RT VRN R RMG+PL+ Sbjct: 667 ATGDDTVIVDAIVSTDGQIYRVDGNRQIEVRAQFSNDDLTNNLDATEQLVGDLYGEAELAALGLPADAIQFDYGQESDNQDDFASLGQAMIVALVLMLVLLVVQFRSIVQPLLIFLAVPFSFLGVFTALSLSDNPISFFVGVGFIALIGVVVNNTILLVDAANQARRRGLRPGLAIGEAVERRFRPLVATTITTVVGLTPLALSDPFWESLGFTLIGGLVSSTILVLFAFPVFYLAVEKVRTPVRNLARKRMGKPLI 923
BLAST of mRNA_M-pyrifera_M_contig81851.19152.1 vs. uniprot
Match: A0A812RNS2_9DINO (MdtB protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812RNS2_9DINO) HSP 1 Score: 358 bits (918), Expect = 1.370e-110 Identity = 196/257 (76.26%), Postives = 217/257 (84.44%), Query Frame = 1 Query: 1 ATGESTTITAARISTDGQILRVDGEREIEVRAAFSNDDLTNNLTATEDFVTSEFDAAELERRGLPADSLGFDYGQESDNQEDFASLGVALIVALGLMLLLLVVQFRSLVQPLLILLAIPFSFFGVFSALSLTGNPISFFVAVGFIALVGVVVNNTILLVDAANQGRRDGLRPGAAIQQAVERRFRPLVATTITTVVGLLPLALSDPFWEALSFTLIGGLISSTIVVLLAFPVFYLIIEKPRTWVRNTVRSRMGRPLV 771 ATG+ T I A +STDGQI RVDG R+IEVRA FSNDDLTNNL ATE V + AEL GLPAD++ FDYGQESDNQ+DFASLG A+IVAL LML+LLVVQFRS+VQPLLI LA+PFSF GVF+ALSL+ NPISFFV VGFIAL+GVVVNNTILLVDAANQ RR GLRPG AI +AVERRFRPLVATT TTVVGL PLALSDPFWE+L FTLIGGL+SSTI+VL AFPVFYL +EK RT VRN R RMG+PL+ Sbjct: 1270 ATGDDTVIVDAIVSTDGQIYRVDGNRQIEVRAQFSNDDLTNNLDATEQLVGDLYGEAELAALGLPADAIQFDYGQESDNQDDFASLGQAMIVALVLMLVLLVVQFRSIVQPLLIFLAVPFSFLGVFTALSLSDNPISFFVGVGFIALIGVVVNNTILLVDAANQARRRGLRPGLAIGEAVERRFRPLVATTNTTVVGLTPLALSDPFWESLGFTLIGGLVSSTILVLFAFPVFYLAVEKVRTPVRNLARKRMGKPLI 1526
BLAST of mRNA_M-pyrifera_M_contig81851.19152.1 vs. uniprot
Match: A0A7Y2IIK1_9ACTN (Efflux RND transporter permease subunit n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2IIK1_9ACTN) HSP 1 Score: 314 bits (804), Expect = 1.750e-97 Identity = 173/256 (67.58%), Postives = 205/256 (80.08%), Query Frame = 1 Query: 7 GESTTITAARISTDGQILRVDGEREIEVRAAFSNDDLTNNLTATEDFVTSEFDAAELERRGLPADSLGFDYGQESDNQEDFASLGVALIVALGLMLLLLVVQFRSLVQPLLILLAIPFSFFGVFSALSLTGNPISFFVAVGFIALVGVVVNNTILLVDAANQGRRDGLRPGAAIQQAVERRFRPLVATTITTVVGLLPLALSDPFWEALSFTLIGGLISSTIVVLLAFPVFYLIIEKPRTWVRNTV--RSRMGRPL 768 GE+T+ TA S+ GQ+ RVDG R IEVRA FSNDDLT NLTA EDFV + AAELE RGLPAD+L FD+GQESDN +DFASLG AL+ ALGLM +LL++QFRSL+QP+L+ LAIPFSFFG+ +AL+LT N ISFF VGFIAL+GVVVNNTILLVD+ANQ RR+GL G +I QAV RRFRPLVAT ITTV GLLPLALSDPFWE LSFTL+GGL+SST +VL++FPV+Y++ V+N V + R R L Sbjct: 663 GEATSFTAVVNSSIGQVTRVDGRRYIEVRAGFSNDDLTANLTAAEDFVAERYTAAELEARGLPADALAFDFGQESDNADDFASLGPALLAALGLMFVLLIIQFRSLLQPVLVFLAIPFSFFGLTAALALTDNGISFFSGVGFIALIGVVVNNTILLVDSANQARREGLSIGDSIAQAVTRRFRPLVATAITTVAGLLPLALSDPFWEGLSFTLMGGLLSSTFLVLISFPVYYVVATALLELVKNQVVPKRRKARAL 918
BLAST of mRNA_M-pyrifera_M_contig81851.19152.1 vs. uniprot
Match: UPI000E3232FD (efflux RND transporter permease subunit n=1 Tax=Euzebya tangerina TaxID=591198 RepID=UPI000E3232FD) HSP 1 Score: 296 bits (757), Expect = 1.220e-90 Identity = 168/259 (64.86%), Postives = 203/259 (78.38%), Query Frame = 1 Query: 1 ATGEST-TITAARISTDGQILRVDGEREIEVRAAFSN-DDLTNNLTATEDFVTSEFDAAELERRGLPADSLGFDYGQESDNQEDFASLGVALIVALGLMLLLLVVQFRSLVQPLLILLAIPFSFFGVFSALSLTGNPISFFVAVGFIALVGVVVNNTILLVDAANQGRRDGLRPGAAIQQAVERRFRPLVATTITTVVGLLPLALSDPFWEALSFTLIGGLISSTIVVLLAFPVFYLIIEKPRTWVRNTVRSRMGRPLV 771 A GE T TIT A +STDGQ+ R DGER +EVRAA+ + LT +T T++ V F +EL RGLP ++LGFD+G ESDNQEDFA L +A +AL LML+L+ QFRS+ Q LLI LAIPFSF GVFS L++T NP+SF V VGFIAL+GV VNNTILLV+AAN+ RR G G AI++AVERRFRPL+ATTITTVVGLLPL+LSDPFWE+L FTLIGGLISST++VL++FPVFYL +E RT VRN R + GRPL+ Sbjct: 660 AVGEETVTITDAIVSTDGQVFRADGERYVEVRAAYDDPSSLTALVTDTQELVEDRF-GSELADRGLPQEALGFDFGLESDNQEDFAGLALAGQIALVLMLVLIAAQFRSIAQSLLIFLAIPFSFLGVFSLLTITDNPLSFLVTVGFIALIGVAVNNTILLVEAANRARRGGATAGEAIREAVERRFRPLIATTITTVVGLLPLSLSDPFWESLGFTLIGGLISSTLLVLVSFPVFYLALEAMRTPVRNWWRRKRGRPLL 917
BLAST of mRNA_M-pyrifera_M_contig81851.19152.1 vs. uniprot
Match: A0A7Y1ZXP9_9ACTN (Efflux RND transporter permease subunit n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A7Y1ZXP9_9ACTN) HSP 1 Score: 294 bits (752), Expect = 5.430e-90 Identity = 164/253 (64.82%), Postives = 196/253 (77.47%), Query Frame = 1 Query: 7 GESTTITAARISTDGQILRVDGEREIEVRAAFSNDD-LTNNLTATEDFVTSEFDAAELERRGLPADSLGFDYGQESDNQEDFASLGVALIVALGLMLLLLVVQFRSLVQPLLILLAIPFSFFGVFSALSLTGNPISFFVAVGFIALVGVVVNNTILLVDAANQGRRDGLRPGAAIQQAVERRFRPLVATTITTVVGLLPLALSDPFWEALSFTLIGGLISSTIVVLLAFPVFYLIIEKPRTWVRNTVRSRMGR 762 G++T I A +STDG+I RVDG+R IEVRA + D L+ L TE V F +E RGLPAD++GFD+G ESDNQ+DFA+LGVA +VAL LMLLL+ +QFRSL Q LLI LAIPFSFFGVF LS T NP+SF VGFIAL+GV VNNTILL+D+AN+ RR+G G AIQ A+ RFRPLVATT+TTVVGLLPL+LSDPFWE+L FTL+GGL+SST++VLLAFP FYL +E RT +RN VR R GR Sbjct: 652 GDATVIDAI-VSTDGEIARVDGQRIIEVRAKYDEDQGLSGILNDTEALVQEAFPPVAVEARGLPADAVGFDFGLESDNQDDFAALGVAGMVALFLMLLLITIQFRSLAQSLLIFLAIPFSFFGVFGILSATDNPLSFLAVVGFIALIGVAVNNTILLIDSANRQRREGASAGEAIQYAITNRFRPLVATTLTTVVGLLPLSLSDPFWESLGFTLMGGLVSSTVLVLLAFPAFYLGLESVRTPLRNVVRRRQGR 903
BLAST of mRNA_M-pyrifera_M_contig81851.19152.1 vs. uniprot
Match: A0A2E3TTC6_9ACTN (Uncharacterized protein n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A2E3TTC6_9ACTN) HSP 1 Score: 278 bits (712), Expect = 3.990e-84 Identity = 155/256 (60.55%), Postives = 190/256 (74.22%), Query Frame = 1 Query: 7 GESTTITAARISTDGQILRVDGEREIEVRAAFSNDD-LTNNLTATEDFVTSEFDAAELERRGLPADSLGFDYGQESDNQEDFASLGVALIVALGLMLLLLVVQFRSLVQPLLILLAIPFSFFGVFSALSLTGNPISFFVAVGFIALVGVVVNNTILLVDAANQGRRDGLRPGAAIQQAVERRFRPLVATTITTVVGLLPLALSDPFWEALSFTLIGGLISSTIVVLLAFPVFYLIIEKPRTWVRNTVRSRMGRPLV 771 G + T+T A +STDG+I R DG++ IEVRA + D ++ L T+ V +F A E+E RGL A+++ FD+G ESDNQ+DFA L VA ++ALGLML+L+ +QFRS+ Q LLI +AIP SF GVF AL LT NP SF VGFIAL+GV VNNTILLVD+ANQ RR G G AIQ AV RFRPL+ TT+TTVVGLLPLAL DPFWE+L FTL+GGL+SST+ VLL FP FYL +E RT +RN VR R GR L+ Sbjct: 660 GGTVTVTDAIVSTDGEIARADGQQFIEVRAQYDEDQGISGILNDTQLLVEEDFTATEIESRGLSAEAVTFDFGLESDNQDDFAGLIVAGVIALGLMLILIAIQFRSVAQALLIFMAIPLSFLGVFGALKLTDNPQSFLSGVGFIALIGVAVNNTILLVDSANQRRRAGASAGEAIQHAVTSRFRPLITTTVTTVVGLLPLALGDPFWESLGFTLMGGLVSSTVFVLLCFPTFYLGLESVRTPLRNGVRRRRGRSLL 915
BLAST of mRNA_M-pyrifera_M_contig81851.19152.1 vs. uniprot
Match: A0A7Y2DN88_9ACTN (MMPL family transporter n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2DN88_9ACTN) HSP 1 Score: 273 bits (699), Expect = 5.820e-82 Identity = 156/248 (62.90%), Postives = 190/248 (76.61%), Query Frame = 1 Query: 7 GESTTITAARISTDGQILRVDGEREIEVRAAFSNDDLTNNLTATEDFVTSEFDAAE-LERRGLPADSLGFDYGQESDNQEDFASLGVALIVALGLMLLLLVVQFRSLVQPLLILLAIPFSFFGVFSALSLTGNPISFFVAVGFIALVGVVVNNTILLVDAANQGRRDGLRPGAAIQQAVERRFRPLVATTITTVVGLLPLALSDPFWEALSFTLIGGLISSTIVVLLAFPVFYLIIEKPRTWVRNTVR 747 GE+TT+ A ST G I R +R IEVRA++ NDDLT NL AT++ + ++ AE L GL AD+L FD+GQESDNQEDFASLG +AL LM +LLVVQFRS++QP+L+ LAIPFSF G+ +AL+ T N ISFF VGFIAL+GVVVNNTILLVD+ANQ RR GL GA+I+QAV RRFRPLVAT +TTV GLLPLALSDPFWE LSFTL+GGL+SST +VLL+FP++YL + W+ R Sbjct: 658 GETTTVVTAIESTAGIISRNGPDRFIEVRASYDNDDLTANLNATQELIENDLVPAERLTELGLRADALEFDFGQESDNQEDFASLGTFGSLALLLMFILLVVQFRSVLQPVLVFLAIPFSFLGLTAALAATDNGISFFSGVGFIALIGVVVNNTILLVDSANQARRSGLSLGASIEQAVRRRFRPLVATALTTVAGLLPLALSDPFWEGLSFTLMGGLLSSTFLVLLSFPIYYLSLTSAVEWLAGGSR 905
BLAST of mRNA_M-pyrifera_M_contig81851.19152.1 vs. uniprot
Match: A0A520Y2P7_9ACTN (Efflux RND transporter permease subunit n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A520Y2P7_9ACTN) HSP 1 Score: 242 bits (617), Expect = 1.170e-70 Identity = 135/251 (53.78%), Postives = 174/251 (69.32%), Query Frame = 1 Query: 7 GESTTITAARISTDGQILRVDGEREIEVRAAFSNDDLTNNLTATEDFVTSEFDAAELERRGLPADSLGFDYGQESDNQEDFASLGVALIVALGLMLLLLVVQFRSLVQPLLILLAIPFSFFGVFSALSLTGNPISFFVAVGFIALVGVVVNNTILLVDAANQGRRDGLRPGAAIQQAVERRFRPLVATTITTVVGLLPLALSDPFWEALSFTLIGGLISSTIVVLLAFPVFYLIIEKPRTWVRNTVRSRMG 759 G++ T+ ++ D + R DG R +EVRA F +D +T+ AT+++ + A +L GL AD+LGFD+G ESDNQE F+SL +A +AL ML+LL++QFRS Q LL+ LAIPFSFFGVF L +T NP+SFFV +G I L+G+ VNNTILLVD ANQ R G AI+ AV RRFRPLVAT+ TTV GLLPLALSDPFWE L+FT+I GL+SST +V+++FP +YL IE R R G Sbjct: 626 GDAFTVLETDVALDDVVAREDGRRLVEVRARFDDDSVTSTTAATQEYFEDNYTAEDLAALGLEADALGFDFGLESDNQESFSSLPLAFGIALLAMLVLLIIQFRSSAQWLLVFLAIPFSFFGVFGGLLITDNPVSFFVMLGLIGLIGIAVNNTILLVDFANQERALGFDRRQAIENAVRRRFRPLVATSFTTVGGLLPLALSDPFWEGLAFTIIFGLLSSTFLVIMSFPYYYLAIEALRDRFTTPWRRSYG 876
BLAST of mRNA_M-pyrifera_M_contig81851.19152.1 vs. uniprot
Match: A0A351ETA5_9ACTN (Uncharacterized protein (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A351ETA5_9ACTN) HSP 1 Score: 209 bits (532), Expect = 1.410e-63 Identity = 121/193 (62.69%), Postives = 142/193 (73.58%), Query Frame = 1 Query: 10 ESTTITAARISTDGQILRVDGEREIEVRAAFSNDD-LTNNLTATEDFVTSEFDAAELERRGLPADSLGFDYGQESDNQEDFASLGVALIVALGLMLLLLVVQFRSLVQPLLILLAIPFSFFGVFSALSLTGNPISFFVAVGFIALVGVVVNNTILLVDAANQGRRDGLRPGAAIQQAVERRFRPLVATTITTV 585 E+ TI ARISTDG I R DG R IEVRA + D ++ LT+TE+ + ++ LE RGL D+LGFD+G ESDNQ+DFA L A ++AL LMLLLL +QFRSL Q +LI LAIPFSFFGVF AL L+ NP+SF VGFIAL+GV VNNTILLVDAANQ RR+G G +I AV RFRPLVATTITTV Sbjct: 5 ETVTIVDARISTDGSIARTDGARYIEVRAKYDEDSGISGILTSTEELLAEDYPGDVLEARGLAPDALGFDFGLESDNQDDFAGLQYAGLIALALMLLLLTIQFRSLAQSMLIFLAIPFSFFGVFGALMLSDNPLSFLAVVGFIALIGVAVNNTILLVDAANQERRNGTGIGESIGSAVTSRFRPLVATTITTV 197
BLAST of mRNA_M-pyrifera_M_contig81851.19152.1 vs. uniprot
Match: A0A7C7LXQ4_9BACT (Efflux RND transporter permease subunit n=1 Tax=Candidatus Saccharibacteria bacterium TaxID=2026720 RepID=A0A7C7LXQ4_9BACT) HSP 1 Score: 217 bits (553), Expect = 1.880e-61 Identity = 124/246 (50.41%), Postives = 172/246 (69.92%), Query Frame = 1 Query: 1 ATGESTTITAARISTDGQILRVDGEREIEVRAAFSNDDLTNNLTATEDFVTSEFDAAELERRGLPADSLGFDYGQESDNQEDFASLGVALIVALGLMLLLLVVQFRSLVQPLLILLAIPFSFFGVFSALSLTGNPISFFVAVGFIALVGVVVNNTILLVDAANQGRRDGLRPGAAIQQAVERRFRPLVATTITTVVGLLPLALSDPFWEALSFTLIGGLISSTIVVLLAFPVFYLIIEKPRTWVRN 738 A G ++TIT +S + R +G+R +EV A F + D++ +TA + V EF + L G +LGFD+GQESD+ E FA+LGV VA+ +L+LL +QFRS++QPLLI+LAIPFS FGVF L +T N +SFF A+G I L+G+ VNNTILL D ANQ ++ G AI A+++RFRPL+ATTITT+V LLPLAL+DPFWE L++T+I GL SSTI+V+L+FP +Y++ E + + Sbjct: 664 ANGTTSTITETDLSGVRGVARTNGDRYVEVSAGFEDSDVSALVTAAQTAVEEEFTDSRLAEYGDQI-TLGFDFGQESDSAESFAALGVVFPVAILAILVLLAIQFRSILQPLLIILAIPFSIFGVFLGLYVTDNSLSFFSAIGMIGLIGIAVNNTILLTDYANQEKQAGKGRVEAISSALQQRFRPLLATTITTIVALLPLALNDPFWEPLAYTIIFGLASSTILVILSFPYYYIMSETASAFAKR 908 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig81851.19152.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig81851.19152.1 >prot_M-pyrifera_M_contig81851.19152.1 ID=prot_M-pyrifera_M_contig81851.19152.1|Name=mRNA_M-pyrifera_M_contig81851.19152.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=258bp ATGESTTITAARISTDGQILRVDGEREIEVRAAFSNDDLTNNLTATEDFVback to top mRNA from alignment at M-pyrifera_M_contig81851:149..922- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig81851.19152.1 ID=mRNA_M-pyrifera_M_contig81851.19152.1|Name=mRNA_M-pyrifera_M_contig81851.19152.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=774bp|location=Sequence derived from alignment at M-pyrifera_M_contig81851:149..922- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig81851:149..922- >mRNA_M-pyrifera_M_contig81851.19152.1 ID=mRNA_M-pyrifera_M_contig81851.19152.1|Name=mRNA_M-pyrifera_M_contig81851.19152.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1548bp|location=Sequence derived from alignment at M-pyrifera_M_contig81851:149..922- (Macrocystis pyrifera P11B4 male)back to top |