mRNA_M-pyrifera_M_contig81578.19090.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig81578.19090.1
Unique NamemRNA_M-pyrifera_M_contig81578.19090.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig81578.19090.1 vs. uniprot
Match: A0A6H5JCU3_9PHAE (Store-operated calcium entry-associated regulatory factor n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JCU3_9PHAE)

HSP 1 Score: 115 bits (288), Expect = 1.090e-28
Identity = 62/111 (55.86%), Postives = 70/111 (63.06%), Query Frame = 1
Query:    1 SRQVGCEGYDYPDDPYILKGSCQLVYSLKAPAKE-----------W----RSWDAGKHRTWDGREAGSF--QGAESDRSDIGSRLVTWAVLGVIGYVLYNVFARSSGGPTG 282
            S +VGCEGYDYPDDPYILK SCQL+YSLKA               W    RSW+ G + TWDGR AG    +G      D GSRLVTWAVLGV+GYVLYN F R++  P G
Sbjct:  103 SVEVGCEGYDYPDDPYILKDSCQLIYSLKASPVNGGGRGGVGDDGWGSSARSWEDGNNPTWDGRPAGRKHGRGEVGTGRDFGSRLVTWAVLGVVGYVLYNTFLRAAETPFG 213          
BLAST of mRNA_M-pyrifera_M_contig81578.19090.1 vs. uniprot
Match: A0A267DFU2_9PLAT (Store-operated calcium entry-associated regulatory factor n=1 Tax=Macrostomum lignano TaxID=282301 RepID=A0A267DFU2_9PLAT)

HSP 1 Score: 73.6 bits (179), Expect = 1.510e-13
Identity = 42/87 (48.28%), Postives = 52/87 (59.77%), Query Frame = 1
Query:    7 QVGCEGYDYPDDPYILKGSCQLVYSLKAPAKEWRSWDAGKHRTWDGREAGSFQGAESDRSDIGSRLVTWAVLGVIGYVLYNVFARSS 267
            QV CEGYDYPDDPYIL GSC L YSLK PA   RS     H++  G ++ S + A SD  +  S ++  AVL + GY +Y  F   S
Sbjct:   97 QVQCEGYDYPDDPYILAGSCGLTYSLK-PAGGSRS-----HKSRSGHKSRSHRQAASDSDNSVSPVIVIAVLAIAGYCIYAFFLAPS 177          
BLAST of mRNA_M-pyrifera_M_contig81578.19090.1 vs. uniprot
Match: A0A1I8GT88_9PLAT (Store-operated calcium entry-associated regulatory factor n=2 Tax=Macrostomum lignano TaxID=282301 RepID=A0A1I8GT88_9PLAT)

HSP 1 Score: 72.8 bits (177), Expect = 6.270e-13
Identity = 42/87 (48.28%), Postives = 51/87 (58.62%), Query Frame = 1
Query:    7 QVGCEGYDYPDDPYILKGSCQLVYSLKAPAKEWRSWDAGKHRTWDGREAGSFQGAESDRSDIGSRLVTWAVLGVIGYVLYNVFARSS 267
            QV CEGYDYPDDPYIL GSC L YSLK PA   RS     H++  G ++ S + A SD     S ++  AVL + GY +Y  F   S
Sbjct:   97 QVQCEGYDYPDDPYILAGSCGLTYSLK-PAGGSRS-----HKSRSGHKSRSHRQAASDSDKSVSPVIVIAVLAIAGYCIYAFFLAPS 177          
BLAST of mRNA_M-pyrifera_M_contig81578.19090.1 vs. uniprot
Match: A0A162XF22_DIDRA (Store-operated calcium entry-associated regulatory factor n=3 Tax=Didymellaceae TaxID=683158 RepID=A0A162XF22_DIDRA)

HSP 1 Score: 67.8 bits (164), Expect = 3.860e-11
Identity = 37/96 (38.54%), Postives = 51/96 (53.12%), Query Frame = 1
Query:    1 SRQVGCEGYDYPDDPYILKGSCQLVYSLKAPAKEWRSWDAGKH-RTWDGREAGSF-QGAESDRSDIGSRLVTWAVLGVIGYVLYNVFARSSGGPTG 282
            S  V CEGYDYP+DPYILKGSC + Y L    K    +  G     W G + GS  +G ++    + + L     +GV G++LYN+  +   GP G
Sbjct:   98 STDVICEGYDYPEDPYILKGSCGVEYRLVLTDKGHEKYGRGNGGHWWGGDDEGSGREGPKTLGEQVAAALFWMVFIGVAGWILYNIVRQWGQGPAG 193          
BLAST of mRNA_M-pyrifera_M_contig81578.19090.1 vs. uniprot
Match: A0A1Y2LR51_EPING (Store-operated calcium entry-associated regulatory factor n=3 Tax=Didymellaceae TaxID=683158 RepID=A0A1Y2LR51_EPING)

HSP 1 Score: 67.4 bits (163), Expect = 5.410e-11
Identity = 38/100 (38.00%), Postives = 52/100 (52.00%), Query Frame = 1
Query:    1 SRQVGCEGYDYPDDPYILKGSCQLVYSLKAPAKEWRSWDAGKH-RTWDGREAGSFQGAESDRSDIGSRLVTWAV-LGVIGYVLYNVFARSSGGPTGECTA 294
            S  V CEGYDYP+DPYILKGSC + Y L    K    +  G     WDG + GS +       D  +  + W V +GV G++++N+  +   GP G   A
Sbjct:   98 STDVICEGYDYPEDPYILKGSCGVEYRLVLTDKGHERYGKGHGGHWWDGDDDGSSRNGPKTMGDRIAAGLFWMVFIGVAGWIVFNIVRQWVQGPAGAAGA 197          
BLAST of mRNA_M-pyrifera_M_contig81578.19090.1 vs. uniprot
Match: A0A6A6ZT28_9PLEO (Store-operated calcium entry-associated regulatory factor n=1 Tax=Ophiobolus disseminans TaxID=1469910 RepID=A0A6A6ZT28_9PLEO)

HSP 1 Score: 65.9 bits (159), Expect = 2.040e-10
Identity = 37/96 (38.54%), Postives = 50/96 (52.08%), Query Frame = 1
Query:    1 SRQVGCEGYDYPDDPYILKGSCQLVYSLKAPAKEWRSWDAGKHRTWDGREAGSF--QGAESDRSDIGSRLVTWAVLGVIGYVLYNVFARSSGGPTG 282
            S  V CEGYD PDDPYILKGSC + Y L    K    +  GK R W+G + G +   G +S    +   L   A +G+  +++Y+ F     GP G
Sbjct:   99 STDVICEGYDSPDDPYILKGSCGVEYRLILTDKGHEKFGKGKGR-WNGDDDGDYGRDGPKSFGEKVAGALFWLAFIGIALWIVYSAFIARQQGPAG 193          
BLAST of mRNA_M-pyrifera_M_contig81578.19090.1 vs. uniprot
Match: H0Z2U4_TAEGU (Store-operated calcium entry-associated regulatory factor n=1 Tax=Taeniopygia guttata TaxID=59729 RepID=H0Z2U4_TAEGU)

HSP 1 Score: 65.1 bits (157), Expect = 3.490e-10
Identity = 34/86 (39.53%), Postives = 47/86 (54.65%), Query Frame = 1
Query:    7 QVGCEGYDYPDDPYILKGSCQLVYSLKAPAKEWRSWDAGKHRTWDGREAGSFQGAESDRSDIGSRLVTWAVLGVIGYVLYNVFARS 264
            +V CEGYDYPDDPYIL+GSC L++ L+  A+  R           G    S+  +  D SD GS  +   VL V+ + +Y +F  S
Sbjct:  101 EVSCEGYDYPDDPYILRGSCSLLFKLELTAEGERKMKNS------GSFGSSYYQSRKDYSDFGSGAIVVIVLLVLAFGVYKLFLSS 180          
BLAST of mRNA_M-pyrifera_M_contig81578.19090.1 vs. uniprot
Match: A0A6A5KS33_9PLEO (Store-operated calcium entry-associated regulatory factor n=1 Tax=Decorospora gaudefroyi TaxID=184978 RepID=A0A6A5KS33_9PLEO)

HSP 1 Score: 64.3 bits (155), Expect = 7.100e-10
Identity = 38/108 (35.19%), Postives = 54/108 (50.00%), Query Frame = 1
Query:    1 SRQVGCEGYDYPDDPYILKGSCQLVYSLKAPAKEWRSWDAGKHRTWDGREAGSFQGAESDRSDIGSRL---VTWAVLG-VIGYVLYNVFARSSGGPTGECTARFRGCW 312
            S  V CEGYDYP+DPYILKGSC + Y L    K    +  GK   W G +    +G  S  + +G R+   + W + G V+ +++Y+     + GP G      R  W
Sbjct:   99 STDVICEGYDYPEDPYILKGSCGVEYRLILTEKGHEKYGKGKGGWWGGDDE---EGRPSGPTTMGERIAGGLFWMLFGGVVLWMIYSALRNRAQGPAGGFAGGNRPGW 203          
BLAST of mRNA_M-pyrifera_M_contig81578.19090.1 vs. uniprot
Match: A0A7K8NSM5_CASCA (Store-operated calcium entry-associated regulatory factor (Fragment) n=1 Tax=Casuarius casuarius TaxID=8787 RepID=A0A7K8NSM5_CASCA)

HSP 1 Score: 62.8 bits (151), Expect = 7.340e-10
Identity = 32/84 (38.10%), Postives = 49/84 (58.33%), Query Frame = 1
Query:    7 QVGCEGYDYPDDPYILKGSCQLVYSLKAPAKEWRSWDAGKHRTWDGREAGS-FQGAESDRSDIGSRLVTWAVLGVIGYVLYNVF 255
            +V CEGYDYPDDPYIL+GSC L++ L+         + G+ +T +    GS +  +  D SD G  ++   VL ++ Y +Y +F
Sbjct:   74 EVSCEGYDYPDDPYILRGSCSLLFRLELT-------EEGERKTKNSGSFGSGYYQSRKDSSDSGPGVIVVIVLLILAYGVYKLF 150          
BLAST of mRNA_M-pyrifera_M_contig81578.19090.1 vs. uniprot
Match: A0A6A5QL18_AMPQU (Store-operated calcium entry-associated regulatory factor n=1 Tax=Ampelomyces quisqualis TaxID=50730 RepID=A0A6A5QL18_AMPQU)

HSP 1 Score: 63.5 bits (153), Expect = 8.550e-10
Identity = 36/98 (36.73%), Postives = 49/98 (50.00%), Query Frame = 1
Query:    1 SRQVGCEGYDYPDDPYILKGSCQLVYSLKAPAKEWRSWDAGKHRTWDGREAGSFQGAESDRSDIGSRLVT---WAVLGVIG-YVLYNVFARSSGGPTG 282
            S  V CEGYD+PDDPYILKGSC + Y L    K    +  G+   W G + G+  G  +     G +L     W   G I  +++Y+ F   + GP G
Sbjct:   31 STDVICEGYDFPDDPYILKGSCGVEYRLVLTDKGHEKYGKGRDGGWWGGDDGN--GGSNGPKSFGEKLAAALFWLAFGGIALWIVYSAFVARAQGPDG 126          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig81578.19090.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JCU3_9PHAE1.090e-2855.86Store-operated calcium entry-associated regulatory... [more]
A0A267DFU2_9PLAT1.510e-1348.28Store-operated calcium entry-associated regulatory... [more]
A0A1I8GT88_9PLAT6.270e-1348.28Store-operated calcium entry-associated regulatory... [more]
A0A162XF22_DIDRA3.860e-1138.54Store-operated calcium entry-associated regulatory... [more]
A0A1Y2LR51_EPING5.410e-1138.00Store-operated calcium entry-associated regulatory... [more]
A0A6A6ZT28_9PLEO2.040e-1038.54Store-operated calcium entry-associated regulatory... [more]
H0Z2U4_TAEGU3.490e-1039.53Store-operated calcium entry-associated regulatory... [more]
A0A6A5KS33_9PLEO7.100e-1035.19Store-operated calcium entry-associated regulatory... [more]
A0A7K8NSM5_CASCA7.340e-1038.10Store-operated calcium entry-associated regulatory... [more]
A0A6A5QL18_AMPQU8.550e-1036.73Store-operated calcium entry-associated regulatory... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig81578contigM-pyrifera_M_contig81578:50..370 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score110.9
Seed ortholog evalue3.7e-22
Seed eggNOG ortholog2880.D8LJV5
Preferred nameTMEM66
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0008150,GO:0010959,GO:0012505,GO:0016020,GO:0016021,GO:0030176,GO:0031224,GO:0031227,GO:0031984,GO:0032879,GO:0042175,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043269,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0050789,GO:0051049,GO:0051924,GO:0065007,GO:0098827,GO:2001256
EggNOG free text desc.Store-operated calcium entry-associated regulatory factor
EggNOG OGs28KQW@1,2QT6Y@2759
Ec32 ortholog descriptionProtein of unknown function DUF1183, TMEM66
Ec32 orthologEc-01_009820.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons1
Model size321
Cds size321
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816722.6988862-CDS-M-pyrifera_M_contig81578:49..3701622816722.6988862-CDS-M-pyrifera_M_contig81578:49..370Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig81578 50..370 -
1692278140.685989-CDS-M-pyrifera_M_contig81578:49..3701692278140.685989-CDS-M-pyrifera_M_contig81578:49..370Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig81578 50..370 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig81578.19090.1prot_M-pyrifera_M_contig81578.19090.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig81578 50..370 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig81578.19090.1

>prot_M-pyrifera_M_contig81578.19090.1 ID=prot_M-pyrifera_M_contig81578.19090.1|Name=mRNA_M-pyrifera_M_contig81578.19090.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=107bp
SRQVGCEGYDYPDDPYILKGSCQLVYSLKAPAKEWRSWDAGKHRTWDGRE
AGSFQGAESDRSDIGSRLVTWAVLGVIGYVLYNVFARSSGGPTGECTARF
RGCWRGG
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mRNA from alignment at M-pyrifera_M_contig81578:50..370-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig81578.19090.1 ID=mRNA_M-pyrifera_M_contig81578.19090.1|Name=mRNA_M-pyrifera_M_contig81578.19090.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=321bp|location=Sequence derived from alignment at M-pyrifera_M_contig81578:50..370- (Macrocystis pyrifera P11B4 male)
TCCCGACAGGTTGGCTGCGAGGGCTACGACTACCCCGACGACCCTTACAT TCTCAAGGGATCGTGCCAGCTCGTCTACTCCCTCAAAGCTCCGGCCAAGG AATGGCGCTCATGGGATGCTGGCAAGCACCGAACCTGGGATGGGCGTGAG GCTGGTAGCTTTCAAGGGGCTGAGAGTGACCGGAGCGATATCGGAAGCCG TTTGGTGACATGGGCTGTGCTGGGGGTGATTGGATACGTCTTGTACAACG TGTTTGCCCGCTCGAGCGGGGGGCCTACGGGTGAGTGTACGGCTCGCTTT CGCGGTTGTTGGAGGGGGGGG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig81578:50..370-

>mRNA_M-pyrifera_M_contig81578.19090.1 ID=mRNA_M-pyrifera_M_contig81578.19090.1|Name=mRNA_M-pyrifera_M_contig81578.19090.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=642bp|location=Sequence derived from alignment at M-pyrifera_M_contig81578:50..370- (Macrocystis pyrifera P11B4 male)
TCCCGACAGGTTGGCTGCGAGGGCTACGACTACCCCGACGACCCTTACAT
TCTCAAGGGATCGTGCCAGCTCGTCTACTCCCTCAAAGCTCCGGCCAAGG
AATGGCGCTCATGGGATGCTGGCAAGCACCGAACCTGGGATGGGCGTGAG
GCTGGTAGCTTTCAAGGGGCTGAGAGTGACCGGAGCGATATCGGAAGCCG
TTTGGTGACATGGGCTGTGCTGGGGGTGATTGGATACGTCTTGTACAACG
TGTTTGCCCGCTCGAGCGGGGGGCCTACGGGTGAGTGTACGGCTCGCTTT
CGCGGTTGTTGGAGGGGGGGGTCCCGACAGGTTGGCTGCGAGGGCTACGA
CTACCCCGACGACCCTTACATTCTCAAGGGATCGTGCCAGCTCGTCTACT
CCCTCAAAGCTCCGGCCAAGGAATGGCGCTCATGGGATGCTGGCAAGCAC
CGAACCTGGGATGGGCGTGAGGCTGGTAGCTTTCAAGGGGCTGAGAGTGA
CCGGAGCGATATCGGAAGCCGTTTGGTGACATGGGCTGTGCTGGGGGTGA
TTGGATACGTCTTGTACAACGTGTTTGCCCGCTCGAGCGGGGGGCCTACG
GGTGAGTGTACGGCTCGCTTTCGCGGTTGTTGGAGGGGGGGG
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