mRNA_M-pyrifera_M_contig8157.19089.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig8157.19089.1 vs. uniprot
Match: A0A6H5JWU4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWU4_9PHAE) HSP 1 Score: 689 bits (1779), Expect = 2.840e-226 Identity = 432/984 (43.90%), Postives = 555/984 (56.40%), Query Frame = 1
Query: 1 ADPDQGGVFFPSESFIGARHGYVFRLGDSGLGFYVDGYVDRPTKAKHAPLHRPWNAGPGEDVIRRAPIGPVHKPFKKIKT-RPRGGKSAAEEPNMRPFTARLAAQRNARVFQSTLVEREHAVDVHTLALLEKLSDPALMKVINACNGHGRTLGKDGKTADKVGQ*FLAQAHLLRVFEVHKHSRRMSIITHFFKLHKNCSLISIIMLTPPRSVSCLVFVLSQGKTKLEFVNTKHHYPGAYKTDGRVILEGGRPVSNELHRTEEQKERTRTYAFKAMQRFRVAHGDLAAAISKKDEDLQNALRNTDPTTLQGIEEEAASSYGAGVYRQ-KGSVDRESGLKGKKPTMAQPMESPEKLRDKFAQSLEAHVRGKDKALMEKVTSLDEEETNQQVVNYLGKGAECLPDSWRHNPDSLREIQKHRKKLVAEIAADNQKVVCPWRPGGRHIAHEPWQAFVPRDRRPPVRSASEEKASTLAGENEDATVKKHEKRWRTHGSGGVGXXXXXXXXXXRERPHTAPSRRRKPFIDIISTRARRVLAAQSPDMPLHNVFSAYSNEPFPRFEPALGPTRPSGQARRSPGPFTDTRPH-NVPGDPCR------------GRHQRVWSAMICPSSSCDRPFTRGNTMRPHSAAPQPQRKFRAPPQRPSTASGATNATESLDGI---GGRPSPDFAHERGQECSTSSQSLNLNVRSGLGVTVLWARLCTPSSDLAYEGSNWPSRPTKSSPSHLSRRRDKPSPKGATE----TAVAERENNPAQW----GDVGEAASAVRVCSTPVVDSECENGRDARRLSGGAT-----LVDLEERLLASTWNRINQRHTVFRGYAERSRRARVWDPSSAVYAEGASEYRAASPASCNVNDERRDRGGGVVMAFPGARANTRDCQREKGNRRKYVGADADQPVEMDWKEVDTRRFRGAADTIEASLAGKLCAAVTDNGTREHLEDCFREAQHFVESAGALLGCSKVERERF 2859
A+P VF S F GA+ GYVF+ GD GLGFYVDGYVDR + K + HRPWNAGPGE+ +R P+GP KPFKKI R + K AAEE + RPF AR+ AQRN+R FQS L ERE +D H L LLEK SDPA K + N HG+ LGKDGK KV S+ F P + G+TKLEF+ +HYPGAY TDG+VILE G PVSNELHRT+ Q ER TY +KA++R+R AH D+A+AI+KKD+ LQ L+ TDP L I EEA +S G G+YRQ K + R G + QP E PE+LR KFA SL++ ++ KDKAL++++ +L+E+ET +Q++ GKGA LP+SWR +P+ L +++ RK+L+AE AAD +KVVCPWRPGG+HIA EPW+ F+PRD RPPVRSASE KA T G ++ + +R G G RP TAP+ RRK F+D IS RARR+LAAQ+P PLH+VFS YSN+PFP RPS Q+ + ++ RP + +PC G QR W + C S + + G RPHSAA + +K R PP+RP+TA G ES D S + A E Q+ + QS +L+V+SG GVTVLWARLC+PSSDL Y+ S WP P S P+ RRR KP AT T VAE E+ +W GD P+V G+ +L G T L D+E L AS+ R+N R +FRGY++RSRR R WDP S YAEGAS++ P+ C RGG P +T + + R + + D PV+MDW++VD R + IE L GK A VTD+ + HL +CF+EAQ VESA LLGC + ERER+
Sbjct: 169 ANPKDEEVFISSSCFTGAKDGYVFKTGDKGLGFYVDGYVDRQVRRKRSLSHRPWNAGPGEEATKRGPLGPAPKPFKKIVPYRTQKEKRAAEENDTRPFMARMVAQRNSRGFQSNLFERERVLDKHILYLLEKFSDPAFFKKKHGYNVHGQMLGKDGKMIVKVSY------------------EEESMEPSF-----------------PGGAK------AWGQTKLEFITEDYHYPGAYNTDGKVILEKGAPVSNELHRTDAQNERACTYRYKAIRRYRAAHSDIASAIAKKDKALQKVLKKTDPAILVEISEEAVTSTGLGIYRQTKRAGGRNGSATGASSAVLQPGERPEQLRQKFAHSLKSQMKSKDKALLKEIAALEEDET-EQIMGNFGKGAGVLPNSWRQDPEGLNRMERRRKELIAENAADRRKVVCPWRPGGKHIAQEPWKPFIPRDHRPPVRSASEGKAETHGGSLGVSSAAQEGRRSVPIHEKGNGKKEA------ERRPRTAPAHRRKGFMDAISPRARRILAAQAPGTPLHSVFSTYSNDPFP----LETRQRPSAQSTPARTEYSGNRPSPTLTTEPCTDTLFQTSGRIGLGTQQRAWVEISC-SPTSSQTLRGGFVARPHSAAAKISKKLRTPPRRPATACGTRVPRESTDNAVAASNVSSTNQAREHEQDHRSDEQSRDLHVQSGPGVTVLWARLCSPSSDLVYKRSVWPEAPAASRPT---RRRGKPRKTSATAPVNGTTVAEGEH---EWDATPGDPSTGPG-------PIVAGSSGGGKP--KLPRGTTDTGGPLEDMENSLYASSSQRVNHRKRIFRGYSDRSRRERTWDPGSEFYAEGASKHSMVRPSPCTGRINWNRRGG---RGNPRQEDDTTKRKHRRDKRHQSRISGNDDPVDMDWEKVDIARLINGSKEIEKVLDGKFFAVVTDDESPVHLGECFQEAQELVESASVLLGCPENERERY 1081
BLAST of mRNA_M-pyrifera_M_contig8157.19089.1 vs. uniprot
Match: D7G599_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G599_ECTSI) HSP 1 Score: 622 bits (1604), Expect = 4.170e-201 Identity = 409/965 (42.38%), Postives = 543/965 (56.27%), Query Frame = 1
Query: 1 ADPDQGGVFFPSESFIGARHGYVFRLGDSGLGFYVDGYVDRPTKAKHAPLHRPWNAGPGEDVIRRAPIGPVHKPFKKIKT-RPRGGKSAAEEPNMRPFTARLAAQRNARVFQSTLVEREHAVDVHTLALLEKLSDPALMKVINACNGHGRTLGKDGK-----TADKVGQ*FLAQAHLLRVFE----VHKHSRRMSII------THFFKLHKNCSLISIIMLTPPRSVSCLVFVLSQGKTKLEFVNTKHHYPGAYKTDGRVILEGGRPVSNELHRTEEQKERTRTYAFKAMQRFRVAHGDLAAAISKKDEDLQNALRNTDPTTLQGIEEEAASSYGAGVYRQ-KGSVDRESGLKGKKPTMAQPMESPEKLRDKFAQSLEAHVRGKDKALMEKVTSLDEEETNQQVVNYLGKGAECLPDSWRHNPDSLREIQKHRKKLVAEIAADNQKVVCPWRPGGRHIAHEPWQAFVPRDRRPPVRSASEEKASTLAGENEDATVKKHEKRW---RTHGSGGVGXXXXXXXXXXRERPHTAPSRRRKPFIDIISTRARRVLAAQSPDMPLHNVFSAYSNEPFP---RFEPALG--PTRPSGQARRS-PGPFTDTRPHNV---PGDPCRGRHQRVWSAMICPSSSCDRPFTRGNTM-RPHSAAPQPQRKFRAPPQRPSTASGAT---NATESLDGIGGRPSPDFAHERGQECSTSSQSLNLNVRSGLGVTVLWARLCTPSSDLAYEGSNWPSRPTKSSPSHLSRRRDKPSPKGATE----TAVAERENNPAQWGDVGEAASAVRVCSTPVVDSECENGRDARRLSG----GATLVDLEERLLASTWNRINQRHTVFRGYAERSRRARVWDPSSAVYAEGASEYRAASPASCN--VNDERRDRGGGVVMAFPGARANTRDCQREKGNRRKYVGADADQPVEMDWKEVDTRRFRGAADTIEASLAGKLCAAVTDNGTR 2766
A+P GVF S F GA+ GYVF+ GD GLGFYVDGYVDR + K + HRPWNAGPGE +R P+GP KPFKKI R + K AAEE + RPF AR+ AQRN+R FQS L ERE +D H L LLEK SDPA K + N HG+ LGKDGK T +K + +V+E H S+R+ + + H + ++ + +G+TKLEF+ +HYPGAY TDG+VILE G PVSNELHRT+ Q ER TY +KA++R+R AH D+A+AI+KKD+ LQ L+ TDP L I EEA +S G G+YRQ K + R G+ + QP E PE+LR KFA SL+A ++GKDKAL++++ +L+E+E Q + ++ GKG E LP+SWR +P+ L+ +++ RK+L+AE AAD +KVVCPWRPGG+HIA EPW+ F+PRD RPPVRSASE KA T G + + +R G+G G RP TAP+ RRK F+D IS RARR+LAAQ+P PLH+VFS YSN+PFP R P+ P R A R P P T+ R + G G QR W+ + C +S RG+ + RP SAA + + + PP+RP+TA G +T + S + A E Q + QS +L+V++G GVTVLWARLC+PSSDL Y+ S WP S+ S +R R KP AT T AE E+ +W +A +D+ G + G G L D+E L AS+ R+N R VFRGY++RSRR R WDP S YAEGAS++ P+ C +N R GG R +R+K ++ + G D PV+MDW++V G T A LC +G++
Sbjct: 170 ANPKDEGVFVSSSCFTGAKDGYVFKTGDKGLGFYVDGYVDRQARRKRSLSHRPWNAGPGEQATKRGPLGPAPKPFKKIVPYRTQKEKRAAEENDTRPFMARMVAQRNSRGFQSNLFERERVLDKHILYLLEKFSDPAFFKKKHGYNVHGQMLGKDGKMIVKVTPEKTEEEKARLPWYRKVYEDRLGKHLPSKRLGDSIEARREAYAYSRHFTAEIDG-----RQDELNRALTKALKGQTKLEFITEDYHYPGAYNTDGKVILEKGAPVSNELHRTDAQNERACTYRYKAIRRYRAAHSDIASAIAKKDKALQKVLKKTDPAILVEISEEAVTSTGMGIYRQTKRAGGRNGSATGESSAVLQPAERPEQLRQKFAHSLKAQIKGKDKALLKEIAALEEDEAEQMMGDF-GKGTEVLPNSWRQDPEGLKRMERRRKELIAENAADRRKVVCPWRPGGKHIAQEPWKPFIPRDHRPPVRSASEGKAETHGGSLGATSAAQEGRRGVPIHEKGNGKKGA---------ERRPRTAPAHRRKGFMDAISPRARRILAAQAPGTPLHSVFSTYSNDPFPLETRQRPSAQSTPARTEYSANRPWPTPTTEPRTDTLFQTSGRVGLGTQQRAWAEISCSPTSSQ--TLRGDFVARPRSAAAEISKNLQTPPRRPATACGTRVPRESTANAVAASNVSSANQAREHEQGHRSDEQSRDLHVQNGPGVTVLWARLCSPSSDLVYKRSVWPEA---SAASRQTRPRGKPRKTSATAPVNATTEAEGEH---EW----DATPGDPSTGPGPIDAGDSGGGKPKLPRGTTDTGGPLEDMENSLYASSSQRVNHRKRVFRGYSDRSRRERTWDPGSEFYAEGASKHSMVRPSPCTGRINGNRI---GGKGDPRQEDDTTKRKHRRDKRHQSRISGDDV--PVDMDWEKV------GVVATRWAFYPCTLCGYHAGSGSK 1096
BLAST of mRNA_M-pyrifera_M_contig8157.19089.1 vs. uniprot
Match: A0A835YZN9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZN9_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 1.060e-10 Identity = 78/265 (29.43%), Postives = 115/265 (43.40%), Query Frame = 1
Query: 214 HKPFKKIKTRPRGGKSAAEEPNMRPFTARLAAQRNARVFQSTLVEREHAVDVHTLALLEKLSDPALMKVINA----CNGHGRTLGKD-GKTADKV--GQ*FLAQAHLL---RVFEVHKHSRRMSIITHFFKLHKNCSLISIIMLTPPRSVSCLVFVLSQGKTKLEFVNTKHHYPGAYKTDGRVILEGGRPVSNELHRTEEQKERTRTYAFKAMQRFRVAHGDLAAAISKKDEDLQNALRNTDPTTLQGIEEEAASSYGAGVYRQK 978
H P + R RG EE + F +R+ AQRNAR+F TL RE +D +A L+ ++D +++ +GH R + GK +V G A+ L R F R + H + ++ + ++ PR+V G Y DG++IL G LH ++ R Y +KA QRF+ AH D+A AIS K ++ LR T+ LQ I E+A SS A +RQK
Sbjct: 103 HSPQYETLLRKRGETPVDEEASTELFLSRMVAQRNARLFSGTLDGREQQLDSAVIAALDGMTDQEYKRLLQRRGYNIHGHRRIFEERVGKLVPRVTLGDAIEARREGLSCARQFTESLDGREAELQAHLEEGLRDVWRMDVVR---PRNV------------------------GGYGIDGKIILPEGEERDKRLHLDDKALARATPYVYKATQRFKAAHEDIANAISAKSLEVSKLLRKTNWKLLQSIAEQAVSSSLA-QHRQK 339 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8157.19089.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig8157.19089.1 >prot_M-pyrifera_M_contig8157.19089.1 ID=prot_M-pyrifera_M_contig8157.19089.1|Name=mRNA_M-pyrifera_M_contig8157.19089.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=952bp MSIITHFFKLHKNCSLISIIMLTPPRSVSCLVFVLSQGKTKLEFVNTKHHback to top mRNA from alignment at M-pyrifera_M_contig8157:4467..11230+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig8157.19089.1 ID=mRNA_M-pyrifera_M_contig8157.19089.1|Name=mRNA_M-pyrifera_M_contig8157.19089.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=6764bp|location=Sequence derived from alignment at M-pyrifera_M_contig8157:4467..11230+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig8157:4467..11230+ >mRNA_M-pyrifera_M_contig8157.19089.1 ID=mRNA_M-pyrifera_M_contig8157.19089.1|Name=mRNA_M-pyrifera_M_contig8157.19089.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=5712bp|location=Sequence derived from alignment at M-pyrifera_M_contig8157:4467..11230+ (Macrocystis pyrifera P11B4 male)back to top |