prot_M-pyrifera_M_contig81388.19039.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig81388.19039.1
Unique Nameprot_M-pyrifera_M_contig81388.19039.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length143
Homology
BLAST of mRNA_M-pyrifera_M_contig81388.19039.1 vs. uniprot
Match: UPI0004F0CCD1 (60S ribosomal protein L13a n=1 Tax=Acanthisitta chloris TaxID=57068 RepID=UPI0004F0CCD1)

HSP 1 Score: 176 bits (446), Expect = 5.460e-54
Identity = 87/134 (64.93%), Postives = 105/134 (78.36%), Query Frame = 0
Query:    3 YRNKLKFKEYLRKRTNTAPWKGPFHQRAPARIFFHTVRGMIPHKTARGQAALGRLKVFEGIPAPYDTTKRMVVPEALRVLKLKPARKFCVLGRLAHDLGWHHRDLVARLEEERKVAAAARYAETRAKETEIQKI 136
            YRNKLKF  +LRKR NT P +GPFH RAP+RIF+ TVRGM+PHKT RGQAAL RLKVF+GIP PYD  KRMVVP AL++++LKP RKF VLGRLAH++GW +RD+   LEE+RK  A  RY + R    ++QKI
Sbjct:   18 YRNKLKFLAFLRKRMNTNPSRGPFHFRAPSRIFWRTVRGMLPHKTKRGQAALERLKVFDGIPPPYDKRKRMVVPAALKIIRLKPTRKFAVLGRLAHEVGWKYRDVTEALEEKRKEKAKLRYNKKRKMMVKLQKI 151          
BLAST of mRNA_M-pyrifera_M_contig81388.19039.1 vs. uniprot
Match: RL13A_CYAPA (60S ribosomal protein L13a n=1 Tax=Cyanophora paradoxa TaxID=2762 RepID=RL13A_CYAPA)

HSP 1 Score: 176 bits (446), Expect = 1.790e-53
Identity = 84/124 (67.74%), Postives = 101/124 (81.45%), Query Frame = 0
Query:    1 AVYRNKLKFKEYLRKRTNTAPWKGPFHQRAPARIFFHTVRGMIPHKTARGQAALGRLKVFEGIPAPYDTTKRMVVPEALRVLKLKPARKFCVLGRLAHDLGWHHRDLVARLEEERKVAAAARYA 124
            +++RNKLKF  +L+KR NT P +GPFH R+PARI + T+RGMIPHKT RG AAL RLK FEG+P PYD  KRMV+P+ALRVL+LKP RKFCVLGRLA ++GW H DLV RLEE+RK  +AA YA
Sbjct:   45 SLFRNKLKFHAFLKKRMNTNPRRGPFHFRSPARILWRTIRGMIPHKTPRGAAALERLKAFEGVPPPYDKMKRMVIPQALRVLRLKPGRKFCVLGRLATEVGWRHSDLVTRLEEKRKTKSAAFYA 168          
BLAST of mRNA_M-pyrifera_M_contig81388.19039.1 vs. uniprot
Match: A0A7S1GMD6_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GMD6_CYCTE)

HSP 1 Score: 172 bits (435), Expect = 1.280e-52
Identity = 83/117 (70.94%), Postives = 100/117 (85.47%), Query Frame = 0
Query:    1 AVYRNKLKFKEYLRKRTNTAPWKGPFHQRAPARIFFHTVRGMIPHKTARGQAALGRLKVFEGIPAPYDTTKRMVVPEALRVLKLKPARKFCVLGRLAHDLGWHHRDLVARLEEERKV 117
            ++YRNK+KF E+LRKRTNT P +GPFH R+P+RIF+ TVRGMIPHKTARG AAL RLK FEGIP P+D  KRMVVP+ALRVL+L+  R +C LG LAH++GW HRDLVARLE++RKV
Sbjct:    3 SLYRNKVKFGEFLRKRTNTNPVRGPFHFRSPSRIFWRTVRGMIPHKTARGAAALLRLKTFEGIPPPFDKMKRMVVPKALRVLQLRADRAYCKLGDLAHNVGWKHRDLVARLEDQRKV 119          
BLAST of mRNA_M-pyrifera_M_contig81388.19039.1 vs. uniprot
Match: W7TSL6_9STRA (60s ribosomal protein l13a n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TSL6_9STRA)

HSP 1 Score: 172 bits (437), Expect = 6.180e-52
Identity = 87/145 (60.00%), Postives = 109/145 (75.17%), Query Frame = 0
Query:    2 VYRNKLKFKEYLRKRTNTAPWKGPFHQRAPARIFFHTVRGMIPHKTARGQAALGRLKVFEGIPAPYDTTKRMVVPEALRVLKLKPARKFCVLGRLAHDLGWHHRDLVARLEEERKVAAAARY----AETRAKETEIQKIKAELSA 142
            + RN  ++ ++LRKRTNT P +GPFH RAP+RI + T+RGM+PHKT RG  AL RL  FEGIPAPYDT KR+VVP+AL++L+LKP R+FC L RLAH++GW HRDLVARLE +RK+ A A Y    A T AK    +K  +ELSA
Sbjct:   48 LVRNHTRYMQFLRKRTNTNPKRGPFHYRAPSRILWRTIRGMLPHKTFRGAQALARLTTFEGIPAPYDTKKRVVVPQALKILRLKPGRRFCTLSRLAHEVGWGHRDLVARLEAKRKIKAEAYYQQKKAGTAAKALAERKAASELSA 192          
BLAST of mRNA_M-pyrifera_M_contig81388.19039.1 vs. uniprot
Match: B5G289_TAEGU (60S ribosomal protein L13a n=18 Tax=Neognathae TaxID=8825 RepID=B5G289_TAEGU)

HSP 1 Score: 172 bits (436), Expect = 6.460e-52
Identity = 83/121 (68.60%), Postives = 98/121 (80.99%), Query Frame = 0
Query:    3 YRNKLKFKEYLRKRTNTAPWKGPFHQRAPARIFFHTVRGMIPHKTARGQAALGRLKVFEGIPAPYDTTKRMVVPEALRVLKLKPARKFCVLGRLAHDLGWHHRDLVARLEEERKVAAAARY 123
            YRNKLKF  +LRKR NT P +GPFH RAP+RIF+ TVRGM+PHKT RGQAAL RLKVF+GIP PYD  KRMVVP AL++++LKP RKF VLGRLAH++GW +RD+   LEE+RK  A  RY
Sbjct:   48 YRNKLKFLAFLRKRMNTNPSRGPFHFRAPSRIFWRTVRGMLPHKTKRGQAALERLKVFDGIPPPYDKRKRMVVPAALKIIRLKPTRKFAVLGRLAHEVGWKYRDVTEALEEKRKEKAKIRY 168          
BLAST of mRNA_M-pyrifera_M_contig81388.19039.1 vs. uniprot
Match: UPI000A2A5613 (60S ribosomal protein L13a n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A5613)

HSP 1 Score: 172 bits (437), Expect = 7.190e-52
Identity = 82/135 (60.74%), Postives = 107/135 (79.26%), Query Frame = 0
Query:    3 YRNKLKFKEYLRKRTNTAPWKGPFHQRAPARIFFHTVRGMIPHKTARGQAALGRLKVFEGIPAPYDTTKRMVVPEALRVLKLKPARKFCVLGRLAHDLGWHHRDLVARLEEERKVAAAARYAETRAKETEIQKIK 137
            YRNKLK+ ++LRKRTNT P  GPFH RAP+RIF+ TVRGMIPHKT RG  A+ RLKVF+G+P PYD  KRMVVP ALRV++LKP RKFCVLGRL+H++GW ++D+++ LEE+RK  +A  +   +    ++QK+K
Sbjct:   65 YRNKLKYLDFLRKRTNTKPSHGPFHFRAPSRIFWRTVRGMIPHKTKRGTEAMNRLKVFDGVPHPYDKEKRMVVPSALRVIRLKPGRKFCVLGRLSHEVGWKYQDIISTLEEKRKAKSAVYFXHKK----KLQKLK 195          
BLAST of mRNA_M-pyrifera_M_contig81388.19039.1 vs. uniprot
Match: A0A3N4LV76_9PEZI (60S ribosomal protein L16 n=1 Tax=Terfezia boudieri ATCC MYA-4762 TaxID=1051890 RepID=A0A3N4LV76_9PEZI)

HSP 1 Score: 171 bits (434), Expect = 1.190e-51
Identity = 83/135 (61.48%), Postives = 107/135 (79.26%), Query Frame = 0
Query:    3 YRNKLKFKEYLRKRTNTAPWKGPFHQRAPARIFFHTVRGMIPHKTARGQAALGRLKVFEGIPAPYDTTKRMVVPEALRVLKLKPARKFCVLGRLAHDLGWHHRDLVARLEEERKVAAAARYAETRAKETEIQKIK 137
            +R+KLK+  YLRK T     +GPFH RAP+RIF+  VRGMI HKT RGQAAL RLKVFEG+P PYDTTKRMVVP+ALRVL+LKP RK+C +GRL+H++GW ++D+V +LEE+RKV +AA YA  +A   ++ + K
Sbjct:   49 FRSKLKYHAYLRKATRFNKTRGPFHFRAPSRIFYKAVRGMIAHKTPRGQAALERLKVFEGVPPPYDTTKRMVVPQALRVLRLKPGRKYCTVGRLSHEVGWKYQDVVVKLEEKRKVKSAAYYARKKAIAKQLDEAK 183          
BLAST of mRNA_M-pyrifera_M_contig81388.19039.1 vs. uniprot
Match: UPI001F037591 (60S ribosomal protein L13a-like n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F037591)

HSP 1 Score: 170 bits (431), Expect = 3.380e-51
Identity = 78/121 (64.46%), Postives = 99/121 (81.82%), Query Frame = 0
Query:    3 YRNKLKFKEYLRKRTNTAPWKGPFHQRAPARIFFHTVRGMIPHKTARGQAALGRLKVFEGIPAPYDTTKRMVVPEALRVLKLKPARKFCVLGRLAHDLGWHHRDLVARLEEERKVAAAARY 123
            YRNKLK+ ++LRKR NT P +GPFH RAP++IF+ TVRGMIPHKT RG  AL R+KVFEG+P PYD  KRMVVP ALRV++LKP R++CVLGRL+H++GW ++D+V  LEE+RK  +A  Y
Sbjct:   48 YRNKLKYLDFLRKRMNTKPSRGPFHFRAPSKIFWRTVRGMIPHKTKRGMEALNRMKVFEGVPPPYDKMKRMVVPSALRVIRLKPGRRYCVLGRLSHEVGWKYQDVVKTLEEKRKAKSAVYY 168          
BLAST of mRNA_M-pyrifera_M_contig81388.19039.1 vs. uniprot
Match: A0A3M7NAU6_9EURO (Uncharacterized protein (Fragment) n=2 Tax=unclassified Chaetothyriales TaxID=316340 RepID=A0A3M7NAU6_9EURO)

HSP 1 Score: 170 bits (431), Expect = 3.590e-51
Identity = 85/136 (62.50%), Postives = 106/136 (77.94%), Query Frame = 0
Query:    3 YRNKLKFKEYLRKRTNTAPWKG-PFHQRAPARIFFHTVRGMIPHKTARGQAALGRLKVFEGIPAPYDTTKRMVVPEALRVLKLKPARKFCVLGRLAHDLGWHHRDLVARLEEERKVAAAARYAETRAKETEIQKIK 137
            +R KLK+  YLRK T   P +G PFH RAPARIF+ TVRGM+PHKTARG AA+ RLKVFEG+P PYDT KR+VVP+ALRVL+LKP RKFC +GRL+H++GW ++D+VARLEE RKV +AA Y   +A   ++   K
Sbjct:   49 FRAKLKYHAYLRKITRYNPTRGGPFHFRAPARIFYKTVRGMVPHKTARGAAAMERLKVFEGVPPPYDTKKRVVVPQALRVLRLKPGRKFCTVGRLSHEVGWKYQDVVARLEERRKVKSAAYYERKKAARKQLADAK 184          
BLAST of mRNA_M-pyrifera_M_contig81388.19039.1 vs. uniprot
Match: UPI000FFD96B1 (60S ribosomal protein L13a n=1 Tax=Empidonax traillii TaxID=164674 RepID=UPI000FFD96B1)

HSP 1 Score: 170 bits (430), Expect = 3.750e-51
Identity = 82/121 (67.77%), Postives = 98/121 (80.99%), Query Frame = 0
Query:    3 YRNKLKFKEYLRKRTNTAPWKGPFHQRAPARIFFHTVRGMIPHKTARGQAALGRLKVFEGIPAPYDTTKRMVVPEALRVLKLKPARKFCVLGRLAHDLGWHHRDLVARLEEERKVAAAARY 123
            YRNKLKF  +LRKR NT P +GPFH RAP+RIF+ TVRGM+PHKT RGQAAL RLKVF+GIP PYD  KRMVVP AL++++LKP RKF VLGRLAH++GW +R++   LEE+RK  A  RY
Sbjct:   65 YRNKLKFLAFLRKRMNTNPSRGPFHFRAPSRIFWRTVRGMLPHKTKRGQAALERLKVFDGIPPPYDKRKRMVVPAALKIIRLKPTRKFAVLGRLAHEVGWKYREVTEVLEEKRKEKAKLRY 185          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig81388.19039.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI0004F0CCD15.460e-5464.9360S ribosomal protein L13a n=1 Tax=Acanthisitta ch... [more]
RL13A_CYAPA1.790e-5367.7460S ribosomal protein L13a n=1 Tax=Cyanophora para... [more]
A0A7S1GMD6_CYCTE1.280e-5270.94Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
W7TSL6_9STRA6.180e-5260.0060s ribosomal protein l13a n=1 Tax=Nannochloropsis... [more]
B5G289_TAEGU6.460e-5268.6060S ribosomal protein L13a n=18 Tax=Neognathae Tax... [more]
UPI000A2A56137.190e-5260.7460S ribosomal protein L13a n=1 Tax=Exaiptasia diap... [more]
A0A3N4LV76_9PEZI1.190e-5161.4860S ribosomal protein L16 n=1 Tax=Terfezia boudier... [more]
UPI001F0375913.380e-5164.4660S ribosomal protein L13a-like n=1 Tax=Xenia sp. ... [more]
A0A3M7NAU6_9EURO3.590e-5162.50Uncharacterized protein (Fragment) n=2 Tax=unclass... [more]
UPI000FFD96B13.750e-5167.7760S ribosomal protein L13a n=1 Tax=Empidonax trail... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005822Ribosomal protein L13PIRSFPIRSF002181RPL13p_RPL13Aa_RPL16e_RPL13ocoord: 2..117
e-value: 4.1E-25
score: 86.3
IPR005822Ribosomal protein L13PFAMPF00572Ribosomal_L13coord: 12..70
e-value: 2.9E-5
score: 24.3
IPR005822Ribosomal protein L13PANTHERPTHR11545RIBOSOMAL PROTEIN L13coord: 2..131
IPR005755Ribosomal protein L13, eukaryotic/archaealTIGRFAMTIGR01077TIGR01077coord: 3..103
e-value: 1.4E-33
score: 114.2
IPR005755Ribosomal protein L13, eukaryotic/archaealPANTHERPTHR11545:SF3RIBOSOMAL PROTEIN L13Acoord: 2..131
IPR036899Ribosomal protein L13 superfamilyGENE3D3.90.1180.10coord: 1..104
e-value: 1.3E-41
score: 143.9
IPR036899Ribosomal protein L13 superfamilySUPERFAMILY52161Ribosomal protein L13coord: 3..103
IPR023563Ribosomal protein L13, conserved sitePROSITEPS00783RIBOSOMAL_L13coord: 39..62

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig81388contigM-pyrifera_M_contig81388:382..810 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig81388.19039.1mRNA_M-pyrifera_M_contig81388.19039.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig81388 382..810 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig81388.19039.1 ID=prot_M-pyrifera_M_contig81388.19039.1|Name=mRNA_M-pyrifera_M_contig81388.19039.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=143bp
AVYRNKLKFKEYLRKRTNTAPWKGPFHQRAPARIFFHTVRGMIPHKTARG
QAALGRLKVFEGIPAPYDTTKRMVVPEALRVLKLKPARKFCVLGRLAHDL
GWHHRDLVARLEEERKVAAAARYAETRAKETEIQKIKAELSA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005822Ribosomal_L13
IPR005755Ribosomal_L13_euk/arc
IPR036899Ribosomal_L13_sf
IPR023563Ribosomal_L13_CS