mRNA_M-pyrifera_M_contig8117.18982.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig8117.18982.1
Unique NamemRNA_M-pyrifera_M_contig8117.18982.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig8117.18982.1 vs. uniprot
Match: D8LL60_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LL60_ECTSI)

HSP 1 Score: 369 bits (946), Expect = 1.110e-122
Identity = 188/228 (82.46%), Postives = 200/228 (87.72%), Query Frame = 1
Query:    1 DTAPCVGSTLFAHGGFVSKCDLVLASQSPRRREIVGMMGLADQVRVVVSDFEENLDKSSFKDPREYAIANARGKAREVAGRVLQDGSGSDGGDAPIVVIGSDTIVDLDGVILEKPRDDDHAFSMLSSLSGRRHLVHSGVSVFTDKIGKMEAAVSFCETTEVLFTALSPEEIRAYIRTREPMDKSGSYGIQGAGGQFVRKVEGCYFNVMGFPMHAFSRHLAGLIEDGKV 684
            D A   G TL A G F+SKCDLVLASQSPRR EIVGMMGLAD+VRVVVS+FEENLDKSSFKDPR+YAIANA GKAREVA R L D  G   G  PIVV+GSDTIVDLDGVILEKPRDD+HAFSMLSSLSGRRHLVHSGVS+FT K+GK +AAVSFCETT+VLFTALS EEIRAYIRTREPMDKSGSYGIQG GGQFVRKV+GCYFNVMGFPMHAFSR LA +I DGK 
Sbjct:   14 DVATTAGGTLLAQGDFMSKCDLVLASQSPRRLEIVGMMGLADRVRVVVSEFEENLDKSSFKDPRDYAIANAEGKAREVASRALLDAEGE--GAEPIVVVGSDTIVDLDGVILEKPRDDEHAFSMLSSLSGRRHLVHSGVSIFTSKLGKDKAAVSFCETTQVLFTALSAEEIRAYIRTREPMDKSGSYGIQGEGGQFVRKVDGCYFNVMGFPMHAFSRRLAEVIRDGKA 239          
BLAST of mRNA_M-pyrifera_M_contig8117.18982.1 vs. uniprot
Match: A0A836CIZ2_9STRA (Inosine triphosphate pyrophosphatase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIZ2_9STRA)

HSP 1 Score: 253 bits (645), Expect = 1.250e-77
Identity = 131/221 (59.28%), Postives = 161/221 (72.85%), Query Frame = 1
Query:   22 STLFAHGGFVSKCDLVLASQSPRRREIVGMMGLADQVRVVVSDFEENLDKSSFKDPREYAIANARGKAREVAGRVLQDGSGSDGGDAPIVVIGSDTIVDLDGVILEKPRDDDHAFSMLSSLSGRRHLVHSGVSVFTDKIGKMEAAVSFCETTEVLFTALSPEEIRAYIRTREPMDKSGSYGIQGAGGQFVRKVEGCYFNVMGFPMHAFSRHLAGLIEDGKV 684
            STL AH  F+  C +VLAS+SPRR+EI G+MGL +++ V+VS+FEE+L K+ F  P +YA A A+ KA EVA +VL   S +     P +V+GSDTIV+LDG ILEKP D  HAF ML SLSGRRHLVHSGV+VFT   G  + A  + +TT V F A+S +EI AY+ + EPMDK+G+YGIQG GGQFV+ VEGCYFNVMGFPM  F   LA LIE GKV
Sbjct:   10 STLLAHKAFMDGCRVVLASKSPRRKEIFGLMGLDERLEVIVSEFEEDLRKADFPQPGDYAAATAKFKAAEVAAKVLPARSDN----RPTIVVGSDTIVELDGTILEKPDDAQHAFRMLKSLSGRRHLVHSGVAVFTGACGSAQPAACWYDTTSVEFLAMSDDEIWAYVESGEPMDKAGAYGIQGLGGQFVKGVEGCYFNVMGFPMSKFGTCLAKLIESGKV 226          
BLAST of mRNA_M-pyrifera_M_contig8117.18982.1 vs. uniprot
Match: A0A7S2S2U2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S2U2_9STRA)

HSP 1 Score: 226 bits (575), Expect = 9.010e-67
Identity = 122/219 (55.71%), Postives = 154/219 (70.32%), Query Frame = 1
Query:   49 VSKCDLVLASQSPRRREIVGMMGLADQVR--VVVSDFEENLDKSSFKD---PREYAIANARGKAREVAGRVLQDGSGSDGGDAPIVVIGSDTIVDLDGVILEKPRDDDHAFSMLSSLSGRRHLVHSGVSVFTDKIGKMEAAVSFCETTEVLFTALSPEEIRAYIRTREPMDKSGSYGIQGAGGQFVRKVEGCYFNVMGFPMHAFSRHLAGLI---EDGK 681
            +S+C LVLAS+SPRRREI  +MGL D+V   +VVSDFEE+L KS F     P+ Y  A A GKAR VAG++   GSG+   + P+ V+G+DTIVDLDG +LEKP  +  A + L  LSGR H VHS V++F+ + G  E  +SFCETT V F  LS  EI AY+ + EPMDK+GSYGIQG GGQFV ++EGCYFNVMG PM  FS  +AGL+   E+G+
Sbjct:   42 LSRCRLVLASKSPRRREIFDLMGL-DRVGYDIVVSDFEEDLPKSDFPGEDGPQRYCEATATGKARSVAGKIFSQGSGTPSAN-PVFVVGADTIVDLDGEVLEKPSSEQDAAATLRRLSGRAHFVHSSVAIFSSRHGVAEPVISFCETTRVKFGQLSDAEISAYVASGEPMDKAGSYGIQGLGGQFVDQIEGCYFNVMGLPMRRFSTAIAGLVAGDEEGR 258          
BLAST of mRNA_M-pyrifera_M_contig8117.18982.1 vs. uniprot
Match: A0A7S2UUT0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUT0_9STRA)

HSP 1 Score: 224 bits (571), Expect = 9.820e-66
Identity = 128/222 (57.66%), Postives = 151/222 (68.02%), Query Frame = 1
Query:   52 SKCDLVLASQSPRRREIVGMMGLADQ--VRVVVSDFEENLDKSSFKDPREYAIANARGKAREVAGRVLQDGSGSDGGDAPIVVIGSDTIVDLDGVILEKPRDDDHAFSMLSSLSGRRHLVHSGVSVFT-DKIGKMEAA--------VSFCETTEVLFTALSPEEIRAYIRTREPMDKSGSYGIQGAGGQFVRKVEGCYFNVMGFPMHAFSRHLAGLIEDGKV 684
            S C +VLASQSPRRREI  MMG+ +   + VVVS+FEENLDKSSF +P  YA  NA  KA++V  ++  D S        + V+ +DTIVDL G ILEKP D+ HAF MLS LSG  HLVHSGV++FT   +    A+        VSF ETTEV    LS +EI AYIRT EPMDKSGSYGIQG GGQFV+ V GCYFNVMGFPMH FS  +A LI+  K+
Sbjct:   73 SSCGIVLASQSPRRREIFDMMGINNSFDINVVVSNFEENLDKSSFDNPGIYAQINAECKAQDVYNQIRNDESRHA---KSLAVVAADTIVDLRGKILEKPSDEQHAFQMLSELSGTSHLVHSGVALFTRPPVANSGASSEDIEPNIVSFYETTEVEIVPLSEDEIWAYIRTGEPMDKSGSYGIQGIGGQFVKGVRGCYFNVMGFPMHRFSAAMAELIQSKKI 291          
BLAST of mRNA_M-pyrifera_M_contig8117.18982.1 vs. uniprot
Match: W7UAS6_9STRA (Acetylserotonin o-methyltransferase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7UAS6_9STRA)

HSP 1 Score: 215 bits (548), Expect = 2.510e-62
Identity = 123/228 (53.95%), Postives = 151/228 (66.23%), Query Frame = 1
Query:   46 FVSKCDLVLASQSPRRREIVGMMGLADQVRVVV-SDFEENLDKSSFKDPREYAIANARGKAREVA---------GRVLQDGSGSDGGDAPIVVIGSDTIVDLDGVILEKPRDDDHAFSMLSSLSGRRHLVHSGVSVFTDKIGKME-----AAVSFCETTEVLFTALSPEEIRAYIRTREPMDKSGSYGIQGAGGQFVRKVEGCYFNVMGFPMHAFSRHLAGLIEDGKV 684
            F +K +L+LAS+SPRR+EI+ +MG   +  VV+ SDF E+LDK +F +P +YA  NA  KA+EVA         G V + G   D G    +VIGSDTIVD DG+ILEKP D  HA++MLSSLSGR HLVHSGV++++ K  K         VSFCET  V F  LS EEI  YIR+ EPMDK+G YGIQG GGQ VR +EGCYF VMG PMH  S  LA   ED ++
Sbjct:   65 FKTKVNLILASKSPRRQEILQLMGFDSKDFVVLPSDFPEDLDKRNFINPADYAQKNAECKAQEVATKLFGGSSSGDVGKVGGQRDAGKKTTIVIGSDTIVDRDGIILEKPEDAQHAYAMLSSLSGRTHLVHSGVAIYSSKGPKSGDGIPLPVVSFCETARVDFAPLSEEEIWNYIRSGEPMDKAGGYGIQGLGGQVVRGIEGCYFTVMGMPMHKLSVALAQFAEDDQI 292          
BLAST of mRNA_M-pyrifera_M_contig8117.18982.1 vs. uniprot
Match: A0A1X6P3D6_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P3D6_PORUM)

HSP 1 Score: 206 bits (525), Expect = 6.240e-60
Identity = 114/209 (54.55%), Postives = 143/209 (68.42%), Query Frame = 1
Query:   64 LVLASQSPRRREIVGMMGLADQVRVVVSDFEENLDKSSFKDPREYAIANARGKAREVAGRVLQDGSGSDGGDAPIVVIGSDTIVDLDGVILEKPRDDDHAFSMLSSLSGRRHLVHSGVSVFTDKIGKM--EAAVSFCETTEVLFTALSPEEIRAYIRTREPMDKSGSYGIQGAGGQFVRKVEGCYFNVMGFPMHAFSRHLAGLIEDGKV 684
            +VLAS SPRRREI+ M+GLA +V    S FEENLDK +F  P EYA  NA  KA  V   V +  +G   G  P +VIGSDTIV +DG ILEKPR +  A+ ML++LSGR H V S V++FT    ++  + A  FCE T V F  LSPE I AYIRT EPMDK+GSYGIQG GG F+  + GCY+NVMGFP+HAF+  +A L++ G++
Sbjct:   15 IVLASGSPRRREILTMLGLAHEVHA--SAFEENLDKGAFPTPAEYAKTNASSKAAAV---VAELAAGGGAGRCPDLVIGSDTIVVVDGRILEKPRSEAAAYEMLATLSGREHSVLSAVALFTPSRSEVRDKPATVFCEHTRVRFAPLSPETIAAYIRTGEPMDKAGSYGIQGVGGSFITGITGCYYNVMGFPLHAFTSAVARLLDAGEL 218          
BLAST of mRNA_M-pyrifera_M_contig8117.18982.1 vs. uniprot
Match: A0A7S0BNY9_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BNY9_9RHOD)

HSP 1 Score: 204 bits (519), Expect = 5.790e-59
Identity = 119/222 (53.60%), Postives = 145/222 (65.32%), Query Frame = 1
Query:   19 GSTLFAHGGFVSKCDLVLASQSPRRREIVGMMGLADQVRVVVSDFEENLDKSSFKDPREYAIANARGKAREVAGRVLQDGSGSDGGDAPIVVIGSDTIVDLDGVILEKPRDDDHAFSMLSSLSGRRHLVHSGVSVFTDKIGKMEAAVSFCETTEVLFTALSPEEIRAYIRTREPMDKSGSYGIQGAGGQFVRKVEGCYFNVMGFPMHAFSRHLAGLIEDGKV 684
            G  +  H  ++S   +VLASQSPRRREI+ ++ L   V  VVS FEENLDKS F  P EY + NAR KA EVA R++    GSD    P +VIGSDT+V LD  ILEKP  +  AF+ML SLS R H V + V++F     K  A  SF E T V F  L+ + I  YIRTREPMDK+G+YGIQG GG  V+ V+GCYFNVMGFPMH F+  LA L++ G V
Sbjct:   13 GFMIVQHLPYLSSKRIVLASQSPRRREILDLLELKHDV--VVSGFEENLDKSMFSHPSEYVLENARRKAEEVAKRLI----GSD--TPPDLVIGSDTVVVLDNKILEKPLSEAEAFTMLKSLSNRNHTVLTSVALFLKDAKKCSA--SFYEATNVRFAELNDDLIWEYIRTREPMDKAGAYGIQGIGGSLVKGVDGCYFNVMGFPMHRFATELAELVDRGAV 224          
BLAST of mRNA_M-pyrifera_M_contig8117.18982.1 vs. uniprot
Match: A0A0G4GLH8_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GLH8_VITBC)

HSP 1 Score: 206 bits (524), Expect = 9.320e-59
Identity = 112/210 (53.33%), Postives = 139/210 (66.19%), Query Frame = 1
Query:   64 LVLASQSPRRREIVGMMGLADQVRVVVSDFEENLDKSSFKDPREYAIANARGKAREVAGRVLQDGSGSDGGDAPI---VVIGSDTIVDLDGVILEKPRDDDHAFSMLSSLSGRRHLVHSGVSVFTDKIGKMEAAVSFCETTEVLFTALSPEEIRAYIRTREPMDKSGSYGIQGAGGQFVRKVEGCYFNVMGFPMHAFSRHLAGLIEDGKV 684
            ++LAS+SPRR+EI G+MGL   V V  S F E+LD  +F  P+ YA ANA  KA EVA   L  G   +    P    VVIG+DTIVDLDGVILEKP + D A SMLS +SGR H VH+GV++FT + G  E    F E+T+V F  LS  EI +Y+ + EPMDK+G YGIQG GG FV  +EGCYFNVMG PMH  S+ LA L  + ++
Sbjct:   87 VILASKSPRRKEICGLMGL--DVTVYPSTFAEDLDHGAFSSPQSYAAANAAHKAAEVARGALGAGGDDESSTCPPAADVVIGADTIVDLDGVILEKPANHDDAVSMLSRMSGRCHAVHTGVAIFTRRAGPAEPVAHFVESTKVKFAPLSRSEIDSYVASGEPMDKAGGYGIQGLGGMFVESIEGCYFNVMGLPMHHLSKVLAQLDANRQI 294          
BLAST of mRNA_M-pyrifera_M_contig8117.18982.1 vs. uniprot
Match: A0A7S1TQE1_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TQE1_9STRA)

HSP 1 Score: 203 bits (517), Expect = 9.440e-59
Identity = 113/220 (51.36%), Postives = 143/220 (65.00%), Query Frame = 1
Query:   16 VGSTLFAHGGFVSKCDLVLASQSPRRREIVGMMGLADQVRVVVSDFEENLDKSSFKDPREYAIANARGKAREVAGRVLQDGSGSDGGDAPIVVIGSDTIVDLDGVILEKPRDDDHAFSMLSSLSGRRHLVHSGVSVFTDKIGKMEAA--VSFCETTEVLFTALSPEEIRAYIRTREPMDKSGSYGIQGAGGQFVRKVEGCYFNVMGFPMHAFSRHLAGLI 669
            + +TL   G        VL S SPRR EI G+MGL  Q  +VVS F E+L KSSF     YA   A  KAREVAGR+L D      G  P V++GSDT+V++DG +LEKP D + A +ML  +SGR H VHSGV+VF++  G+   A  ++F ETTEV F  L+  +I  Y+ +REPMDK+G YGIQG GGQ V  + GCYFNVMGFPMH FS+ +A L+
Sbjct:    1 MAATLLGAGDAARSVRWVLGSASPRRAEIFGLMGL--QPEIVVSGFAEDLAKSSFATAAAYAEGTATEKAREVAGRLLPDA-----GAQPTVIVGSDTVVEIDGDVLEKPGDVEEAKAMLRRMSGRNHFVHSGVAVFSNLGGRDAGAPTMTFAETTEVTFVELTELDIENYVASREPMDKAGGYGIQGLGGQMVCGLSGCYFNVMGFPMHRFSKSMAELL 213          
BLAST of mRNA_M-pyrifera_M_contig8117.18982.1 vs. uniprot
Match: R7QNE7_CHOCR (Maf protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QNE7_CHOCR)

HSP 1 Score: 199 bits (507), Expect = 1.800e-57
Identity = 110/205 (53.66%), Postives = 138/205 (67.32%), Query Frame = 1
Query:   61 DLVLASQSPRRREIVGMMGLADQVRVVVSDFEENLDKSSFKDPREYAIANARGKAREVAGRVLQDGSGSDGGDAPIVVIGSDTIVDLDGVILEKPRDDDHAFSMLSSLSGRRHLVHSGVSVFTDKIGKMEAAVSFCETTEVLFTALSPEEIRAYIRTREPMDKSGSYGIQGAGGQFVRKVEGCYFNVMGFPMHAFSRHLAGLIED 675
            ++VLASQSPRRREI+ +MGL      V S FEENLDKSSFK PR+Y +ANA GKA +VA                 +VIGSDT+V LDG +LEKP+ +  AF ML+ LSGR+H V +GVS+    I K +   +F E T V F  LS + I AYI+T EPMDK+G+YGIQG GG  VR++EGCYF VMG PMHA +R +A L ++
Sbjct:   13 NIVLASQSPRRREILTLMGLP--FTPVPSQFEENLDKSSFKSPRDYVMANAHGKAADVAASQTDYD----------LVIGSDTVVVLDGKVLEKPKSEGEAFRMLAQLSGRQHTVATGVSL----IAKGDTTRTFAEETSVWFAHLSDDVIGAYIKTGEPMDKAGAYGIQGRGGALVRRIEGCYFTVMGLPMHALAREIAELCKE 201          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8117.18982.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LL60_ECTSI1.110e-12282.46Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CIZ2_9STRA1.250e-7759.28Inosine triphosphate pyrophosphatase-like protein ... [more]
A0A7S2S2U2_9STRA9.010e-6755.71Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S2UUT0_9STRA9.820e-6657.66Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
W7UAS6_9STRA2.510e-6253.95Acetylserotonin o-methyltransferase n=3 Tax=Monodo... [more]
A0A1X6P3D6_PORUM6.240e-6054.55Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S0BNY9_9RHOD5.790e-5953.60Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A0G4GLH8_VITBC9.320e-5953.33Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
A0A7S1TQE1_9STRA9.440e-5951.36Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
R7QNE7_CHOCR1.800e-5753.66Maf protein n=1 Tax=Chondrus crispus TaxID=2769 Re... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig8117contigM-pyrifera_M_contig8117:5890..10447 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score319.3
Seed ortholog evalue1.2e-84
Seed eggNOG ortholog2880.D8LL60
Preferred nameASMTL
KEGG rclassRC00055,RC00523
KEGG koko:K01868,ko:K06287
KEGG ReactionR03663
KEGG Pathwayko00970,map00970
KEGG ModuleM00359,M00360
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464
EggNOG free text desc.nucleoside-triphosphate diphosphatase activity
EggNOG OGsCOG0424@1,KOG1509@2759
Ec32 ortholog descriptionMaf-like protein
Ec32 orthologEc-25_000130.1
EC6.1.1.3
COG Functional cat.D
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko03016
Exons6
Model size1611
Cds size579
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig8117.18982.1prot_M-pyrifera_M_contig8117.18982.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig8117 5998..9523 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816717.2854867-UTR-M-pyrifera_M_contig8117:5889..59971622816717.2854867-UTR-M-pyrifera_M_contig8117:5889..5997Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig8117 5890..5997 +
1692278137.5266488-UTR-M-pyrifera_M_contig8117:5889..59971692278137.5266488-UTR-M-pyrifera_M_contig8117:5889..5997Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig8117 5890..5997 +
1622816717.3746624-UTR-M-pyrifera_M_contig8117:9523..104471622816717.3746624-UTR-M-pyrifera_M_contig8117:9523..10447Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig8117 9524..10447 +
1692278137.6079278-UTR-M-pyrifera_M_contig8117:9523..104471692278137.6079278-UTR-M-pyrifera_M_contig8117:9523..10447Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig8117 9524..10447 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816717.296962-CDS-M-pyrifera_M_contig8117:5997..60121622816717.296962-CDS-M-pyrifera_M_contig8117:5997..6012Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8117 5998..6012 +
1692278137.5408213-CDS-M-pyrifera_M_contig8117:5997..60121692278137.5408213-CDS-M-pyrifera_M_contig8117:5997..6012Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8117 5998..6012 +
1622816717.3108146-CDS-M-pyrifera_M_contig8117:6644..67521622816717.3108146-CDS-M-pyrifera_M_contig8117:6644..6752Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8117 6645..6752 +
1692278137.551358-CDS-M-pyrifera_M_contig8117:6644..67521692278137.551358-CDS-M-pyrifera_M_contig8117:6644..6752Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8117 6645..6752 +
1622816717.3230925-CDS-M-pyrifera_M_contig8117:7599..76861622816717.3230925-CDS-M-pyrifera_M_contig8117:7599..7686Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8117 7600..7686 +
1692278137.5617623-CDS-M-pyrifera_M_contig8117:7599..76861692278137.5617623-CDS-M-pyrifera_M_contig8117:7599..7686Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8117 7600..7686 +
1622816717.3336728-CDS-M-pyrifera_M_contig8117:8217..84261622816717.3336728-CDS-M-pyrifera_M_contig8117:8217..8426Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8117 8218..8426 +
1692278137.572097-CDS-M-pyrifera_M_contig8117:8217..84261692278137.572097-CDS-M-pyrifera_M_contig8117:8217..8426Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8117 8218..8426 +
1622816717.345434-CDS-M-pyrifera_M_contig8117:9110..91881622816717.345434-CDS-M-pyrifera_M_contig8117:9110..9188Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8117 9111..9188 +
1692278137.585081-CDS-M-pyrifera_M_contig8117:9110..91881692278137.585081-CDS-M-pyrifera_M_contig8117:9110..9188Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8117 9111..9188 +
1622816717.3598967-CDS-M-pyrifera_M_contig8117:9441..95231622816717.3598967-CDS-M-pyrifera_M_contig8117:9441..9523Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8117 9442..9523 +
1692278137.597111-CDS-M-pyrifera_M_contig8117:9441..95231692278137.597111-CDS-M-pyrifera_M_contig8117:9441..9523Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8117 9442..9523 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig8117.18982.1

>prot_M-pyrifera_M_contig8117.18982.1 ID=prot_M-pyrifera_M_contig8117.18982.1|Name=mRNA_M-pyrifera_M_contig8117.18982.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=193bp
MMGLADQVRVVVSDFEENLDKSSFKDPREYAIANARGKAREVAGRVLQDG
SGSDGGDAPIVVIGSDTIVDLDGVILEKPRDDDHAFSMLSSLSGRRHLVH
SGVSVFTDKIGKMEAAVSFCETTEVLFTALSPEEIRAYIRTREPMDKSGS
YGIQGAGGQFVRKVEGCYFNVMGFPMHAFSRHLAGLIEDGKV*
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mRNA from alignment at M-pyrifera_M_contig8117:5890..10447+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig8117.18982.1 ID=mRNA_M-pyrifera_M_contig8117.18982.1|Name=mRNA_M-pyrifera_M_contig8117.18982.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=4558bp|location=Sequence derived from alignment at M-pyrifera_M_contig8117:5890..10447+ (Macrocystis pyrifera P11B4 male)
GACACCGCTCCATGCGTGGGGTCGACGCTGTTCGCTCACGGTGGATTTGT CTCGAAGTGCGACTTGGTTCTTGCCAGCCAAAGCCCTCGCCGGCGGGAGA TAGTGGGCATGATGGGACTGGCAGTGAGTGATCCTTTCGCATGTGGAGGA CTCGTGTAGAGCTACAAAATATCTGCGCATTATGTATCCCCTCACGGCCG CCTCAACGGTTGGGATACCAACCACTTGAAGGTAGGGCTGGGCATTTTTT GCAGTAGCAAAACGAGTTAACAGCAGCACTGCGGGCAACATCCCTTGTGT CGGTTTGATGTCGGTCGATGGAGAAGTTGGATCTTACGCCGAAACGCGCG TGTTTGCTTCGCTGCTGCCCGGTCCAAGGCTCGTTGGTTTGGCGGGATAC TAACTTACTTCGTGGTGGCTTGTTGTGAGGTAGCACGAGGCGTATGGCAA ATCCTTTTTTCCCTCTTCCTCGCGTAAGGTGAGAGTTCTATCGTTTTTTT TACGTCCACCCTTCGCTCCTGAGGCTCGATCGTGCTCGATTCTCCACCAC GCTCGATGCAAAGTGCCTAATGTATCGTGCGATGATGTCCGCCTTCGGGG ACACCTTCCGAGCATCTTGATAGAATCTCATTCCAAGCGATGTCGTAATT CATTAAAAAACAAGAGCGTTTTTTTAATGGTAAAAAATGATACTTGGATG TATGAGATTCGTTGTTGACTCGTCGCCGCCCCCGACTCGATTTCCCTCTT ATCAGGATCAAGTGCGAGTTGTGGTGTCTGACTTCGAAGAGAATCTAGAC AAATCGTCTTTTAAAGACCCGAGGGAATACGCCATTGCCAACGCACGCGG CAAAGCAAGAGAGGTAACTGTTGGGACGGGTGCATCGCTGCACATCACCA CGAGTAGTGCACAAACTTCTAGAAGTTGGTTGTCCGCGCACGGTATGGGT GCATTTTATTATTTCGCAGTGAGTACTGTGTCCAATCTGCTTGAGAGCTA GAATGTTTTCGGCACGCACAATGTCGCAAATACTCAGCCTAAATTGCGCA TACAAGTACCGGAGGTTCTGCAATGAGCACGTGCCTTTTCCACCGCACAT AACGAAAAACTCACTACTGTTTTAGCACCCAGCAACTGAGTATTGAGGGT GGGCATCGTTGACTGTTGGTTGCTCTTCCTTTTAAAAGCGCGTCGTTCGC GCTAGCGTCGGTACCGAGTATAGTTTATCTTTACACGTGGCCTATTGCTG CAGTCGGTTTCTTATCTATCTCAGTTGTCCCCTATATTTCGCTATAAAGG CATAGGCTTGTGGATCACCCGGTGCTTTCTCAAGATTTTTCGGATGACGA TGTGGAGTCGCCATATGTGTTAGCTCTTGCTTCTCCTGCGATCTTTTTTT TTCGGTATATTTTTTGCGGGCTTGCTGCTTCTGCTATTAATAGTGCTTCC CCTGACAAGAACCGGGTATTAATAGTGCTTCCCCTGACAAGAACCGGGTT GGACCGACTACTGATGCAACCTTATCCTGGGATTAGGCTGTAACATTTTA CAAACGTTAAATTTGCAGGCGCAATCGTTTGGGTACATTCGCTCCGATGG TGGTACACGACCGCAACACATTGCGCCGTTCGCTACTGGAGGAATGCAGG CGCAAATGTGCACAAGAATAGTTTTAAATTGCGCGTTCTCCGCGGCTTGC CCGAACGCAGGTGGCAGGCCGTGTACTCCAGGACGGCAGCGGGAGCGATG GGGGCGACGCACCTATCGTTGTGATAGGGTCCGACACCATTGTCGACGTG AGGCTTATCGACATTGCAGGTTTACGGCATATAAAGTTATTTGCTTTCAT CGGCAACCAGATATATACTCGTGTCGCGCGGGGTACGCGTCGTATACTGT ACGTGCAGCGGTGATCACATGGTAGTTGACTGCCTTCATCGTAGGCCTAT TTGACCCAAACGTGTGGTGCGACCGGTCGTGCATTGGCAGTCGTTTGTCT GGTAGAGCTGAGTGGCAACCAAGGGCAACTCGAATCGAAGACACAAGGTG GAGGACGCAACGCAAGCTAGCCTTTGTGAGCGCATTGCGTTTTTGGCCGT GCCGATCAATATTGTTTCCACCGCTGTTGCGCATGTCCGAGCCACCCTCC TCAGCCTCGATAACCTTTTCGCTAGCAGAAATTATACGGTTCTAAGCCCA AGCAAGTTGTGCCCAAACCTTTCGGGCCGTTCCAAAGGGGTTGACGATTC CAACCTTCCCTATAGCCTCCACGGTCCTATTCGGCAACATAACCGAGCGA GCATCCGTGCCGCACCCACCGTTTTCAGTTGGATGGCGTTATCTTGGAGA AGCCCAGGGACGACGACCACGCGTTCTCGATGCTTTCGAGCCTAAGCGGG CGACGGCATCTGGTGCACTCGGGAGTGTCCGTATTTACCGACAAGATCGG CAAAATGGAGGCAGCGGTTAGCTTTTGCGAGACCACAGAAGTACTCTTCA CGGCTCTCTCGCCCGAAGAAATCCGCGCGTACATCCGGTGGGTACCATAC GCGTAGCGACCGGGTGCACAGAACTTGGAGGACGCCGGTAAAGAGACACT GCACAATCTATTGTTCGTCAGCTGTCCCCACTCTCAACGTGAACACTGGG GCGGTCTTGTTTTGAGACTACTGTAGCATGTGCAATGCGCCTGCGCCCAT TCGAGGGCTACTACAGTGCATTAAAAAGTCAAGTCCGCTTTGTTTGTGGC GTATATAGGAAGCTCTCCTTTGAAAATACGCATCCACGCGACCCTCGAGA GGACGCAGTTGACCACCACCGCAAGGACCGATACGAGGTACAAGTTTGGA GCAGGGGAGGAAATACGATGTTCACAGCATTGGCCACTGCTTGCTTGGGG CATAATAAATTTTGTGTCCGTACTGCAATGGCTGGTGCAAGGGGTCGTAC GACACGGGCGCAGCAGGATCCCACGCGTACTGCTGCGCGCTCCCTCTGCT CGTAGATGGTTCAATGGTTGATAAAGCCAAACTTGTCAGTGCTTGGTGGA TACCTCTGGCTGCCGAGATTGTTACGCTTTGTCTTCGCTATTCCCCGCTG CTTTAGCCGCACCGCCCCAAATGGATCCGGCGAAAATTGCTCCGGGTAAT AAAATATGCTGTGTGCGACAGCACCCCTCCTGATTCGATTATCTACCGTC CTTTGCTACTACACCGCTCAGAACTCGAGAGCCGATGGACAAGTCGGGGT CTTACGGCATTCAGGGCGCAGGAGGACAATTTGTTCGCAAAGTGGAAGGG TGAGCTCGTGATTATCGTTGCAAGACAACCCGCGGGTGTAAGGCGCGCGG CACCTCGCAGGATTAATTGCAGCAACCACTTCTTTGATTAACTGGGGGCT CTTTGGGTACGGTGGGCATTGGAGTCGCCTGCACCACTCGCTGTGCTGTG TCTTAGCATTCCCGTTAATGTGAAAAAATAGCCATGTGTTCCTTCGATTT TTTTATTTTTATTCGCTGGACCTTCCGGTTGTACGTGTGCATTTACGCGC AGGTGCTACTTCAACGTGATGGGTTTCCCCATGCACGCGTTCTCGAGGCA TTTAGCGGGCCTCATCGAGGACGGGAAAGTGTGATAAAGCAACGACGGAG GCCTTGGACAAGATCTCAGGGGCGTTTTATACCGCATGCTACGTGGTTGG AACACATACATCTGGTGGCAAAATGTTGAGTTCTGAGCGGCGTGAACCTG CTTCGATACTACTGGTACATGGTAGGCAGTGTATACGTGGTAGAATTATA GGGCGCCGCAAGAAGGCTTGGGCACTGCCTAGTCGCACAAACGGGCAGAT CCTCCTCGACATGCCGGCCTTATTCACCGTGGCCGCCGCTTTGTACAGGT GGTTGATTTTGTTTTGGTTCAACTTGCATGATGAGGGAAAAGACGAAATG TGTACTTATGACGCATGGGGTCGGGGGAGACAAGCTAAAAAATCTCCGTT CATGGCGGCTTGTCGTTATCACATATTTTTAATGCGGACACGCTTTTCAA GGTGGGCGGGTATGACGCTGTAACGGTTCCATTGGATTATTTACAACGCT TTACCGGAACCGGCAACGCAGACGACGACCCATGGCGTCTCACATGCAAG ACGAGCCTTCCATACACATCCTCCAGATATGAGCCCTCCTATGCTTGTTA GTTAGCCTGGACCGTCTTAGGCGAGAAGGCAGCTATAGTAGTAGCTCATA AGCATCTGTCCATCGGCCCGGGTTCGATGTTATTGATGGTCGACGATTGG AAGACGCCCCAATGATTCAGTTGTTGCAGTGTCCCCGGTTCCCTGTTTCC GCACTAGGATTTGGCGTAATCGTCACGTCATCGCAACTGGTACGCATAGG CGCTACGGCTTGCCTAGGCATTACTCATCCTTCTTCCGTCAGGACATCTG GGCGAGGAGAGCAAGTATCCCCGAATTTACTGGGGTTCTCTGTGACGGAA AGTCGACCTGTTTCCGTCCGACGAAATGTGTCTGTCTGCCTAATGTGATT ACGTGAAC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig8117:5890..10447+

>mRNA_M-pyrifera_M_contig8117.18982.1 ID=mRNA_M-pyrifera_M_contig8117.18982.1|Name=mRNA_M-pyrifera_M_contig8117.18982.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1158bp|location=Sequence derived from alignment at M-pyrifera_M_contig8117:5890..10447+ (Macrocystis pyrifera P11B4 male)
ATGATGGGACTGGCAATGATGGGACTGGCAGATCAAGTGCGAGTTGTGGT
GTCTGACTTCGAAGAGAATCTAGACAAATCGTCTTTTAAAGACCCGAGGG
AATACGCCATTGCCAACGCACGCGGCAAAGCAAGAGAGGATCAAGTGCGA
GTTGTGGTGTCTGACTTCGAAGAGAATCTAGACAAATCGTCTTTTAAAGA
CCCGAGGGAATACGCCATTGCCAACGCACGCGGCAAAGCAAGAGAGGTGG
CAGGCCGTGTACTCCAGGACGGCAGCGGGAGCGATGGGGGCGACGCACCT
ATCGTTGTGATAGGGTCCGACACCATTGTCGACGTGGCAGGCCGTGTACT
CCAGGACGGCAGCGGGAGCGATGGGGGCGACGCACCTATCGTTGTGATAG
GGTCCGACACCATTGTCGACTTGGATGGCGTTATCTTGGAGAAGCCCAGG
GACGACGACCACGCGTTCTCGATGCTTTCGAGCCTAAGCGGGCGACGGCA
TCTGGTGCACTCGGGAGTGTCCGTATTTACCGACAAGATCGGCAAAATGG
AGGCAGCGGTTAGCTTTTGCGAGACCACAGAAGTACTCTTCACGGCTCTC
TCGCCCGAAGAAATCCGCGCGTACATCCGTTGGATGGCGTTATCTTGGAG
AAGCCCAGGGACGACGACCACGCGTTCTCGATGCTTTCGAGCCTAAGCGG
GCGACGGCATCTGGTGCACTCGGGAGTGTCCGTATTTACCGACAAGATCG
GCAAAATGGAGGCAGCGGTTAGCTTTTGCGAGACCACAGAAGTACTCTTC
ACGGCTCTCTCGCCCGAAGAAATCCGCGCGTACATCCGAACTCGAGAGCC
GATGGACAAGTCGGGGTCTTACGGCATTCAGGGCGCAGGAGGACAATTTG
TTCGCAAAGTGGAAGGAACTCGAGAGCCGATGGACAAGTCGGGGTCTTAC
GGCATTCAGGGCGCAGGAGGACAATTTGTTCGCAAAGTGGAAGGGTGCTA
CTTCAACGTGATGGGTTTCCCCATGCACGCGTTCTCGAGGCATTTAGCGG
GCCTCATCGAGGACGGGAAAGTGTGAGTGCTACTTCAACGTGATGGGTTT
CCCCATGCACGCGTTCTCGAGGCATTTAGCGGGCCTCATCGAGGACGGGA
AAGTGTGA
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