mRNA_M-pyrifera_M_contig80751.18896.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig80751.18896.1 vs. uniprot
Match: A0A5Q2RLM6_9ACTN (DNA helicase n=1 Tax=Actinomarinicola tropica TaxID=2789776 RepID=A0A5Q2RLM6_9ACTN) HSP 1 Score: 249 bits (635), Expect = 5.670e-74 Identity = 147/298 (49.33%), Postives = 183/298 (61.41%), Query Frame = 1 Query: 13 VRYSPATIDAAIVTARDNELPLNDAKSVFVEVLLRDARGQLLA--RGVAQEDLARLLPELRTSKEFKRLVDKIWPGLSGAQLVRGLLGSPTSRRRATHGVLHPEEAELLHRPSAKKIADEQWTTADLALLDEANAFTSGIGRTYGHVVVDEAQDLSAMALRATGRRAAGGSMTILGDIAQATGVGAQTSWHSVTNGLGMDPAAVRRRELTVGYRVPGPILDYANRLLPTTAPDITPSTSIRSRGPEPEH-HLAEGPEVPATVARAAAALGGDWSTIGVVVMPDRMNAVLAALHDAGLD 897 VR + + A+ TAR L A+ VF +L R LL RG A + + R F+ LV++ WP S QLVR +LG+ T R R VL EE +LLHR AKK+ DE+WTTAD+ LLDEA A G+ TYGH+V DEAQDLSAMALR GRRA GGS+TILGD+AQ+T G Q W V + LG PAA+ EL VGYRVPGP+LD A+RLLP APD+ PS S+R+ G P + +G E+PA VA AA L G W++IGV+ + AVL AL AG+D Sbjct: 315 VRLTADDVAEALATARARRLDDTAAREVFRSLLARRVEALLLPQFRGEAPAG-SDFQGDARADATFRALVNRTWPTTSAGQLVRKVLGTRTLRERVARDVLTAEERDLLHRAPAKKLTDERWTTADVPLLDEAEALVGGVRATYGHIVADEAQDLSAMALRMLGRRAQGGSLTILGDLAQSTAPGGQDRWDVVVDHLG-PPAALHIIELEVGYRVPGPVLDVASRLLPLAAPDVRPSRSVRTAGDPPTFTRVDDGRELPAVVAEIAADLSGTWTSIGVIAPEPHVEAVLDALRAAGVD 610
BLAST of mRNA_M-pyrifera_M_contig80751.18896.1 vs. uniprot
Match: A0A538JK77_9ACTN (DNA helicase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538JK77_9ACTN) HSP 1 Score: 217 bits (553), Expect = 5.710e-62 Identity = 137/310 (44.19%), Postives = 176/310 (56.77%), Query Frame = 1 Query: 10 SVRYSPATIDAAIVTARDNELPLNDAKSVFVEVLLRDARGQLLARGVAQEDLA-RLLPELRTSKEFKRLVDKIWPGLSGAQLVRGLLGSPTSRRRATHGVLHPEEAELLHRPSAKKIADEQWTTADLALLDEANAFTSGIGRTYGHVVVDEAQDLSAMALRATGRRAAGGSMTILGDIAQATGVGAQTSWHSVTNGLGMD--------PAAVRR-----RELTVGYRVPGPILDYANRLLPTTAPDITPSTSIRSRGPEPEHHLAEGPEVPATVARAAAALGGDWSTIGVVVMPDRMNAVLAALHDAGLD 897 SVR I A + A +LP ND + +F E L+R AR + AR A + + LR ++FK L+D+ WP L LVR +LG+ + RA GVL P E LL R + + ADE+WT ADLALLDEA A T+G TYGHVVVDEAQDL++M LR RR SMT+LGD+AQAT VGAQ++W V + L P A RR EL VGYRVP ILD+ANRLLP AP + PS S+R+ G P + VA AL W+T+GV+ ++++ AAL A +D Sbjct: 308 SVRLPAPQIAALVDIALGRDLPSNDRRELFRERLVRLARQRYEARPGADLSVEPAFVASLRAGRDFKALLDRTWPSLRAPALVRSVLGNRHTLSRAADGVLEPAEQALLLRRNTARAADERWTRADLALLDEAEALTTGTPVTYGHVVVDEAQDLTSMELRLLARRTPERSMTVLGDLAQATAVGAQSNWDDVLHHLVAQEARQTVVAPEAERRSRARIEELGVGYRVPAAILDFANRLLPVAAPHLRPSRSVRTAGDPPLVLSVATDGLAHAVATEVGALAQRWTTVGVIAPMSGLDSIAAALRAAAID 617
BLAST of mRNA_M-pyrifera_M_contig80751.18896.1 vs. uniprot
Match: A0A349B0F1_9ACTN (DNA helicase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A349B0F1_9ACTN) HSP 1 Score: 208 bits (530), Expect = 1.600e-59 Identity = 125/265 (47.17%), Postives = 158/265 (59.62%), Query Frame = 1 Query: 124 RGQLLARGVAQEDLARLLPEL--------RTSKEFKRLVDKIWPGLSGAQLVRGLLGSPTSRRRATHGVLHPEEAELLHRPSAKKIADEQWTTADLALLDEANAFTSGIGRTYGHVVVDEAQDLSAMALRATGRRAAGGSMTILGDIAQATGVGAQTSWHSVTNGLGMDPAAVRRRELTVGYRVPGPILDYANRLLPTTAPDITPSTSIRSRGPEPEHHLAEGPEVPATVARAAAALGGDWSTIGVVVMPDRMNAVLAALHDAGL 894 R QLL R + + +P L R+ F R +D++WP L+ LV+ LL + +RRRAT G+L EE++LL RP + AD +W A++ LLDEA A G+ TYGH++VDEAQDLSAMALR RRA GGSMT++GD+AQAT Q SW V GL AA R ELTVGYR P PILD ANRLLP APD+TP+ SIR G P E+ AT A A A G+ T+ VV + + +AL DAG+ Sbjct: 238 RNQLLHRAYELHERSAEVPALKANFVAAARSDAGFARYLDRLWPTLAATTLVQRLLTNRAARRRATDGLLSAEESDLLARPLPSRKADVRWWPAEVPLLDEAEARLHGVRTTYGHIIVDEAQDLSAMALRMLARRAHGGSMTVVGDLAQATRAWGQASWDDVV-GLLQGAAAPARAELTVGYRTPAPILDLANRLLPVAAPDVTPARSIRKTGEAPVLVPTTESELAATSAGAVADAAGERGTVAVVATAGHHDELASALDDAGI 501
BLAST of mRNA_M-pyrifera_M_contig80751.18896.1 vs. uniprot
Match: UPI001C627ADE (AAA family ATPase n=1 Tax=Iamia sp. SCSIO 61187 TaxID=2722752 RepID=UPI001C627ADE) HSP 1 Score: 199 bits (505), Expect = 6.010e-55 Identity = 116/246 (47.15%), Postives = 148/246 (60.16%), Query Frame = 1 Query: 178 PEL----RTSKEFKRLVDKIWPGLSGAQLVRGLLGSPTSRRRATHGVLHPEEAELLHRPSAKKIADEQWTTADLALLDEANAFTSGIGRTYGHVVVDEAQDLSAMALRATGRRAAGGSMTILGDIAQATGVGAQTSWHSVTNGLGMDPAAVRRRELTVGYRVPGPILDYANRLLPTTAPDITPSTSIRSRGPEPEHHLAEGPE-VPATVARAAAALGGDWSTIGVVVM-PDRMNAVLAALHDAGLD 897 PEL RTS + +R + ++WP G LVR LL S + RRA G+L +E L+ RP+A + DE+WT A+ L+DEA A G+ RTYGH+V DEAQDLS MALRA RR SMTILGD+AQAT GA SW LG P A RR +LTVGYRVP ++ A+RLLP AP +TP+ S+R G P P+ + A A L W+++GV+V PDR + V AL AG+D Sbjct: 394 PELEAAVRTSDDLRRALTRLWPSARGPALVRRLLTSRAALRRAAAGILDADEQALVLRPAAASLDDERWTVAEAVLVDEAGARIDGVPRTYGHLVADEAQDLSPMALRALARRCPSASMTILGDLAQATEPGATASWDEALRHLGSPPTA-RREDLTVGYRVPAAAMELADRLLPRVAPGLTPTVSVRVGGRPPRLEAVTEPDALEAAAVAAVRRLATGWASVGVIVPGPDRRDGVAGALLAAGVD 638
BLAST of mRNA_M-pyrifera_M_contig80751.18896.1 vs. uniprot
Match: A0A7V9GFN0_9ACTN (DNA helicase n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7V9GFN0_9ACTN) HSP 1 Score: 180 bits (456), Expect = 3.450e-48 Identity = 121/295 (41.02%), Postives = 156/295 (52.88%), Query Frame = 1 Query: 13 VRYSPATIDAAIVTARDNELPLNDAKSVFVEVLLRDARGQL-LARGVAQEDLARLLPELRTSKEFKRLVDKIWPGLSGAQLVRGLLGSPTSRRRATHGVLHPEEAELLHRPSAKKIADEQWTTADLALLDEANAFTSGIGRTYGHVVVDEAQDLSAMALRATGRRAAGGSMTILGDIAQATGVGAQTSWHSVTNGLGMDPAA-VRRRELTVGYRVPGPILDYANRLLPTTAPDITPSTSIRSRGPEPEHHLA---EGPEVPATVARAAAA-LGGDWSTIGVVVMPDRMNAVLAAL 879 VR + A+ +P N + LLR AR + RG L L + F +++ +WP + L+R LL + A+ GVL +E L+ RP A+ +ADE+WT A+ LDEA + G TYGH++VDEAQDL+AMALRA RR GSMT+LGD+AQAT G Q SW L A VR EL +GYRVP PIL+ ANRLL AP I P+ S+R+ GP P A +G + PA VA AAA G ++GVV P AV A L Sbjct: 311 VRIDADELADAVDEVAARGVPSNIGRVALRTRLLRLARADVDRRRGEGVVPAGALEGSLPRDRAFVKVLHGLWPATTAPALMRRLLSKGRALAEASAGVLDDDERALVRRPVARGLADERWTHAEQVALDEAASLLDGATTTYGHIIVDEAQDLTAMALRALARRCPSGSMTVLGDLAQATAPGGQRSWDEALRELASPTGAPVRLVELELGYRVPAPILEVANRLLAEAAPHIRPARSVRTHGPAPVFLAAGGADGADGPAAVAVAAAVERAGRGHSVGVVATPTYAAAVTALL 605
BLAST of mRNA_M-pyrifera_M_contig80751.18896.1 vs. uniprot
Match: UPI0013E0926C (AAA family ATPase n=1 Tax=Modestobacter sp. KNN46-3 TaxID=2711218 RepID=UPI0013E0926C) HSP 1 Score: 179 bits (454), Expect = 1.330e-47 Identity = 121/294 (41.16%), Postives = 151/294 (51.36%), Query Frame = 1 Query: 34 IDAAIVTARDNELPLNDAKSVFVEVLLRDA-RGQLLARGVAQEDLARLLPELRTSKEFKRLVDKIWPGLSGAQLVRGLLGSPTSRRRATHGVLHPEEAELLHRPSAKKIADEQWTTADLALLDEANAFTSGIGRTYGHVVVDEAQDLSAMALRATGRRAAGGSMTILGDIAQATGVGAQTSWHSVTNGLGMDPAAVRRRELTVGYRVPGPILDYANRLLPTTAPDITPSTSIRSRGPEPEHHLAEGPEVPATVARAAAALGGDWS---TIGVVVMPDRMNAVLA----ALHDAG 891 + A + A +LP N + V +L A R A+ A + P +R F +D++WP + +L+R L G+ T AT GVL +E L R I DE WT ADL LDE + +G GRTYGHVVVDEAQDLS M RA RR GS T+LGD+AQATG + +WH +T LG D ++ ELT+GYRVPGP++D A RLLPT AP + SIR EP HL V RA D + T VVV VLA L DAG Sbjct: 325 VRALVADAASRDLPHNQTRDVLRRLLSAAAFRAHSEAQAAAGRAVIATEPAIRRLSTFTNALDRMWPTFTPEELLRSLYGTQTWLVNATTGVLSADERASLFRDPQPGIDDEPWTQADLFCLDELSFLLNGDGRTYGHVVVDEAQDLSPMHARALARRCPNGSFTLLGDLAQATGPWIRDNWHELTQYLGDDSPSIE--ELTIGYRVPGPVVDLAARLLPTIAPSLAAPRSIRRGLGEPSVHLGPDDGSSGVVERATLLAEADVNAGLTTAVVVADAAFADVLAQIRQGLPDAG 616
BLAST of mRNA_M-pyrifera_M_contig80751.18896.1 vs. uniprot
Match: A0A495JEY1_9ACTN (DNA helicase n=1 Tax=Micromonospora pisi TaxID=589240 RepID=A0A495JEY1_9ACTN) HSP 1 Score: 169 bits (428), Expect = 4.070e-44 Identity = 117/297 (39.39%), Postives = 148/297 (49.83%), Query Frame = 1 Query: 7 RSVRYSPATIDAAIVTARDNELPLNDAKSVFVEVLLRDARGQLLARGVAQEDLARLLPELRTSKEFKRLVDKIWPGLSGAQLVRGLLGSPTSRRRATHGVLHPEEAELLHRPSAKKIADEQWTTADLALLDEANAFTSGIGRTYGHVVVDEAQDLSAMALRATGRRAAGGSMTILGDIAQATGVGAQTSWHSVTNGLGMDPAAVRRRELTVGYRVPGPILDYANRLLPTTAPDITPSTSIRSRGPEPEHHLAEGPEVPATVARAAAALGGDWSTIGVVVMPDRMNAVLAALHDAGLD 897 R V A + A+ AR ELP + +F RD GQ++A A LV+++WP + +R LLGS + R A EE LHR SA +++ E W+ ADLALLDE + +G GR YGHVVVDEAQDLS M LRA GRR+A GS T++GDIAQ+TG A+ SW VT L P V L GYRVP P + A RLLP AP +T +R EP H E P V A +G+V P V AAL + G++ Sbjct: 297 RFVTVPGAEVAEALDHARAAELPYLGRRQLF-----RDRLGQIVADRTGGAAPA-------GGSALANLVERLWPQQTAPAFLRDLLGSRSRLRAAAGTDFTAEELTHLHRRSADRLSQELWSAADLALLDELDHLVNGAGRRYGHVVVDEAQDLSPMQLRAVGRRSANGSFTVVGDIAQSTGAWARDSWDEVTRHL-PTPHPVTVTALRYGYRVPRPAYELAARLLPVAAPGVTAPEVVRDGPAEPRTHRVGLTERPGRVVAVALEHAAAGRFVGIVCPPRCRREVEAALAENGVE 580
BLAST of mRNA_M-pyrifera_M_contig80751.18896.1 vs. uniprot
Match: A0A1G7TKR7_9ACTN (DNA helicase n=2 Tax=Klenkia brasiliensis TaxID=333142 RepID=A0A1G7TKR7_9ACTN) HSP 1 Score: 167 bits (422), Expect = 3.760e-43 Identity = 113/276 (40.94%), Postives = 148/276 (53.62%), Query Frame = 1 Query: 46 IVTARDNELPLNDAKSVFVEVLLRDA-RGQLLARGVAQEDLARLLPELRTSKEFKRLVDKIWPGLSGAQLVRGLLGSPTSRRRATHGVLHPEEAELLHRPSAKKIADEQWTTADLALLDEANAFTSGIGRTYGHVVVDEAQDLSAMALRATGRRAAGGSMTILGDIAQATGVGAQTSWHSVTNGLGMDPAAVRRRELTVGYRVPGPILDYANRLLPTTAPDITPSTSIRSRGPEPEHHLA--EGPEVPATVARAAAALGGDWSTIGVVVMPDRMNA 864 + A LP N A+ V + L A R A+ A + P LR F +D++WP L+ +++RG+ G+ T A GVL +E LL R I DE WT ADL LDE + +G GR+YGHVVVDEAQDLS M RA RR GS T+LGD+AQATG + W +T L PA + +LTVGYRVPGP+++ A LLP APD+ S+R P H+A ++ ATV A+A T VVV PD+ +A Sbjct: 331 VTDAASRRLPHNQARDVLRQSLSAAAFRAYSEAQAAAGRAVIATEPALRRLSTFTNALDRMWPTLTPEEMLRGVYGTQTWLVDAASGVLSADERALLFREPRSSIDDEPWTAADLFCLDELSYLLNGEGRSYGHVVVDEAQDLSPMQARALARRCPSGSFTLLGDLAQATGQWIRDDWQELTVHLHHQPAQIE--DLTVGYRVPGPVVELAAGLLPHIAPDLAVPRSVRQGLGAPTVHVAAQSDADLLATVVTLASADVEAGLTTAVVV-PDQDHA 603
BLAST of mRNA_M-pyrifera_M_contig80751.18896.1 vs. uniprot
Match: A0A6G0A814_9ACTN (DNA helicase n=2 Tax=Bacteria TaxID=2 RepID=A0A6G0A814_9ACTN) HSP 1 Score: 166 bits (419), Expect = 6.160e-43 Identity = 124/313 (39.62%), Postives = 157/313 (50.16%), Query Frame = 1 Query: 1 GLRSVRYSPATIDAA--IVTARDNELPLNDAKSVFVEVLLRDARGQLLARGVAQEDLARLLPELRTSKEFKRLVDKIWPGLSGAQLVRGLLGSPTSRRRATHGVLHPEEAELLHRPSAKKIADEQWTTADLALLDEANAFTSGIG--------RTYGHVVVDEAQDLSAMALRATGRRAAGGSMTILGDIAQATGVGAQTSWHSVTNGLGMDPAAVRRRELTVGYRVPGPILDYANRLLPTTAPDITPSTSIRSRGPEP----EHHLAEGPEVPATVARAAAALGGDWSTIGVVVMPDRMNAVLAALHDAGLD 897 GL+++R+ T+D + IVT ++A FVE D L A G Q D L R + E ++ ++ +WP LS AQL+ L GSP A L E LL+RP A + D WT D+ LLDEA A RTYGH+V+DEAQDLS M LR RR+ GSMTI+GDIAQATG A W S+ L D RR ELT+GYRVPGP ++ A R+L APD+ P SIR G P H + V V R AL T+ V+ + AAL AG+D Sbjct: 306 GLQTLRF---TVDQSLEIVTEARRRFRSHNAARRFVEERFFDV---LAASGRGQVDPKTLRERTRRTLEIRKALEWMWPVLSPAQLLHDLFGSPALLALAAGRHLDASELTLLYRPRAARADDVVWTRQDVPLLDEARARLGPRPAHREEDELRTYGHIVIDEAQDLSPMELRVLKRRSLNGSMTIVGDIAQATGAWAHEDWESILEHL-PDRRPPRRAELTIGYRVPGPSMELAARVLREAAPDLRPPRSIREEGDNPVITPAVHASLAHTVAGEVQRELEALSS--GTLAVIAPESLVADTEAALEAAGVD 609
BLAST of mRNA_M-pyrifera_M_contig80751.18896.1 vs. uniprot
Match: A0A653ZH41_9MICC (DNA helicase n=1 Tax=Arthrobacter sp. 9AX TaxID=2653131 RepID=A0A653ZH41_9MICC) HSP 1 Score: 163 bits (413), Expect = 8.320e-42 Identity = 100/212 (47.17%), Postives = 126/212 (59.43%), Query Frame = 1 Query: 214 VDKIWPGLSGAQLVRGLLGSPTSRRRATHGVLHPEEAELLHRPSAKKIADEQWTTADLALLDEANAFTSGIGRTYGHVVVDEAQDLSAMALRATGRRAAGGSMTILGDIAQATGVGAQTSWHSVTNGLGMD-PAAVRRR--ELTVGYRVPGPILDYANRLLPTTAPDITPSTSIRSRGPEPEHHLAEGPEVPATVARAAAALGGDWSTIGVV 840 V+KIWP ++ Q +R LLGS +RA G L P+E ELL+R A+K++DE WTTADLALLDEA A RTYGH+VVDEAQDLS M LRA RR+ GSMT++GDIAQ+TG ++ SW + LG PA V + EL GYRVP + D A +L + AP +TP +R P E+ VAR G +GVV Sbjct: 376 VEKIWPQITPQQFLRELLGSRERMKRAAEGHLAPDEMELLYRQQAEKVSDEPWTTADLALLDEAQAAMREAPRTYGHIVVDEAQDLSKMQLRAIRRRSKNGSMTVVGDIAQSTGPYSRDSWDDIAAILGEGTPAQVTSQIAELEHGYRVPKQVFDVALPILQSAAPSVTPPRILRDVEYAPRFAAVPAGELAEEVARTVFMHSGRGRFVGVV 587 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig80751.18896.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig80751.18896.1 >prot_M-pyrifera_M_contig80751.18896.1 ID=prot_M-pyrifera_M_contig80751.18896.1|Name=mRNA_M-pyrifera_M_contig80751.18896.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=299bp GLRSVRYSPATIDAAIVTARDNELPLNDAKSVFVEVLLRDARGQLLARGVback to top mRNA from alignment at M-pyrifera_M_contig80751:42..938+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig80751.18896.1 ID=mRNA_M-pyrifera_M_contig80751.18896.1|Name=mRNA_M-pyrifera_M_contig80751.18896.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=897bp|location=Sequence derived from alignment at M-pyrifera_M_contig80751:42..938+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig80751:42..938+ >mRNA_M-pyrifera_M_contig80751.18896.1 ID=mRNA_M-pyrifera_M_contig80751.18896.1|Name=mRNA_M-pyrifera_M_contig80751.18896.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1794bp|location=Sequence derived from alignment at M-pyrifera_M_contig80751:42..938+ (Macrocystis pyrifera P11B4 male)back to top |