prot_M-pyrifera_M_contig8064.18876.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig8064.18876.1
Unique Nameprot_M-pyrifera_M_contig8064.18876.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length579
Homology
BLAST of mRNA_M-pyrifera_M_contig8064.18876.1 vs. uniprot
Match: A0A6H5KW77_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW77_9PHAE)

HSP 1 Score: 249 bits (636), Expect = 9.300e-68
Identity = 196/330 (59.39%), Postives = 228/330 (69.09%), Query Frame = 0
Query:    1 MCSCVGFPGLKAIAANFSHEDVCAVCKEEGNLLCCDFCPATHHLTCLDPPMLALPSENVQWACPACSAKVEVTEMTAPQQKPKRERKDGKKRQRASSAT-----AGSPRDSGEGAGTSFTIPKRKKEQKRAKAQGPPRGGASAQEGLESHKSPRVKMEGKEGKPTRDAAXXXXXXXXXXXSTRIANAPKQPRVLPRMGLGLADAAAAAEILAMRGQDVCGSRHA-RIPSKSMMSLAVAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKALGLKKLLHQRVQYDEASANPTSAFSPKKLLKHRLLAAHANQQQASSAPAPAP 324
            MCS +GF GLKA+AAN  HEDVCAVCKEEG+LLCCDFCP+T+HLTCLDPPML+LP ++VQWACPACSA VEV EM+APQ KPKRERKDG+KRQR S+AT     + SPR +G  AG SFTIPK KK  K+             +  L    SPR+              XXXX         R+  AP++  + PR+GLGL  +        +R  D+ GSR+  + P+K+MMSLAVAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       KALGLKKLLHQRVQ+DEA++NP  AFSPKKLLKHRLLAA       SS PAP+P
Sbjct:  126 MCSAIGFSGLKALAANSPHEDVCAVCKEEGDLLCCDFCPSTYHLTCLDPPMLSLPPDDVQWACPACSANVEVAEMSAPQLKPKRERKDGRKRQRTSNATVAVAESSSPR-AGADAGGSFTIPKLKKPGKKRNKXXXXXXXXXGEAKL----SPRIVKXXXXXXXXXXXXXXXXSSANSANRNRMMKAPQKAEISPRVGLGLTASTDEMSAATLRYPDLSGSRNNDKSPTKAMMSLAVAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------KALGLKKLLHQRVQHDEANSNP--AFSPKKLLKHRLLAAQQATITTSSDPAPSP 441          
BLAST of mRNA_M-pyrifera_M_contig8064.18876.1 vs. uniprot
Match: D7FS64_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS64_ECTSI)

HSP 1 Score: 239 bits (610), Expect = 1.460e-64
Identity = 184/313 (58.79%), Postives = 217/313 (69.33%), Query Frame = 0
Query:    1 MCSCVGFPGLKAIAANFSHEDVCAVCKEEGNLLCCDFCPATHHLTCLDPPMLALPSENVQWACPACSAKVEVTEMTAPQQKPKRERKDGKKRQRASSAT---AGSPRDSGEGAGTSFTIPKRKKEQKRAKAQGPPRGGASAQEGLESHKSPRVKMEGKEGKPTRDAAXXXXXXXXXXXSTRIANAPKQPRVLPRMGLGLADAAAAAEILAMRGQDVCGSRHA-RIPSKSMMSLAVAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKALGLKKLLHQRVQYDEASANPTSAFSPKKLLKHRLLAA 309
            MCS +GFPGLKA+AAN  HEDVCAVCKEEG+LLCCDFC +T+HLTCLDPPML+LPS++VQWACPACSA +EV EM+APQ KPKRERKDG+KRQR S+A    + SPR +G  AG +FTIPK KK  K+             +  L    SPR+              XX           R+  AP++  + PR+GLGL  +        +R  D+ GSR+  + P+K+MMSLAVAA XXXXXXXXXXXXXXXXXXXXXXXXXXXX        KALGLKKLLHQRVQ+DEA++NP  AFSPKKLLKHRLLAA
Sbjct:  126 MCSAIGFPGLKALAANSPHEDVCAVCKEEGDLLCCDFCTSTYHLTCLDPPMLSLPSDDVQWACPACSASIEVAEMSAPQLKPKRERKDGRKRQRTSTAAVAGSSSPR-AGADAGGNFTIPKLKKPGKKRNXXXXXXXXXXGEAKL----SPRIVKXXXXXXXXXXXXXXLASSANSANRNRMVKAPQKAEISPRVGLGLTASTDEMSAATLRYPDLSGSRNNDKSPTKAMMSLAVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------KALGLKKLLHQRVQHDEANSNP--AFSPKKLLKHRLLAA 423          
BLAST of mRNA_M-pyrifera_M_contig8064.18876.1 vs. uniprot
Match: A0A1W4VIZ2_DROFC (chromodomain-helicase-DNA-binding protein 3 n=1 Tax=Drosophila ficusphila TaxID=30025 RepID=A0A1W4VIZ2_DROFC)

HSP 1 Score: 72.4 bits (176), Expect = 1.500e-9
Identity = 30/59 (50.85%), Postives = 39/59 (66.10%), Query Frame = 0
Query:    8 PGLKAIAANFSHEDVCAVCKEEGNLLCCDFCPATHHLTCLDPPMLALPSENVQWACPAC 66
            P  KA  +  S E+ C VCK+ G+LLCCD CP  +HLTCLDPP+ ++P  +  W CP C
Sbjct:   14 PQNKAKKSKLSDEEFCRVCKDGGDLLCCDSCPLVYHLTCLDPPLKSIPKGD--WTCPRC 70          
BLAST of mRNA_M-pyrifera_M_contig8064.18876.1 vs. uniprot
Match: A0A0R3VSS9_TAEAS (Uncharacterized protein n=1 Tax=Taenia asiatica TaxID=60517 RepID=A0A0R3VSS9_TAEAS)

HSP 1 Score: 72.4 bits (176), Expect = 2.010e-9
Identity = 29/55 (52.73%), Postives = 37/55 (67.27%), Query Frame = 0
Query:   18 SHEDVCAVCKEEGNLLCCDFCPATHHLTCLDPPMLALPSENVQWACPACSAKVEV 72
            SH+D C +C++ G +LCCD CPA  HLTCL PP+ A+P  N  W CP C  + EV
Sbjct:  470 SHDDFCRICRQSGEVLCCDTCPAVFHLTCLTPPLEAVP--NSSWHCPLCETEQEV 522          
BLAST of mRNA_M-pyrifera_M_contig8064.18876.1 vs. uniprot
Match: A0A0R3X3Z5_HYDTA (Uncharacterized protein n=1 Tax=Hydatigena taeniaeformis TaxID=6205 RepID=A0A0R3X3Z5_HYDTA)

HSP 1 Score: 72.4 bits (176), Expect = 2.010e-9
Identity = 29/54 (53.70%), Postives = 37/54 (68.52%), Query Frame = 0
Query:   18 SHEDVCAVCKEEGNLLCCDFCPATHHLTCLDPPMLALPSENVQWACPACSAKVE 71
            SH+D C +C++ G +LCCD CPA  HLTCL PP+ A+P  N  W CP C A+ E
Sbjct:  469 SHDDFCRICRQSGEVLCCDTCPAVFHLTCLTPPLEAVP--NSSWHCPLCEAEQE 520          
BLAST of mRNA_M-pyrifera_M_contig8064.18876.1 vs. uniprot
Match: UPI001885BB48 (autoimmune regulator n=1 Tax=Syngnathus acus TaxID=161584 RepID=UPI001885BB48)

HSP 1 Score: 69.3 bits (168), Expect = 4.340e-9
Identity = 29/58 (50.00%), Postives = 38/58 (65.52%), Query Frame = 0
Query:   10 LKAIAANFSHEDVCAVCKEEGNLLCCDFCPATHHLTCLDPPMLALPSENVQWACPACS 67
            + A   N  ++D CAVCK+ G L+CCD CP   HLTCLDPP+ ++PS +  W C  CS
Sbjct:  158 IAASGQNHHNDDDCAVCKDGGELICCDGCPRAFHLTCLDPPLASVPSGS--WCCKDCS 213          
BLAST of mRNA_M-pyrifera_M_contig8064.18876.1 vs. uniprot
Match: W6UFA6_ECHGR (Nucleosome-remodeling factor subunit BPTF n=1 Tax=Echinococcus granulosus TaxID=6210 RepID=W6UFA6_ECHGR)

HSP 1 Score: 71.2 bits (173), Expect = 4.430e-9
Identity = 28/55 (50.91%), Postives = 37/55 (67.27%), Query Frame = 0
Query:   18 SHEDVCAVCKEEGNLLCCDFCPATHHLTCLDPPMLALPSENVQWACPACSAKVEV 72
            +H+D C +C++ G +LCCD CPA  HLTCL PP+ A+P  N  W CP C  + EV
Sbjct:  470 AHDDFCRICRQSGEVLCCDTCPAVFHLTCLTPPLEAVP--NSSWHCPLCETEQEV 522          
BLAST of mRNA_M-pyrifera_M_contig8064.18876.1 vs. uniprot
Match: A0A068YJE0_ECHMU (Fetal alzheimer antigen falz n=2 Tax=Echinococcus TaxID=6209 RepID=A0A068YJE0_ECHMU)

HSP 1 Score: 71.2 bits (173), Expect = 4.580e-9
Identity = 28/55 (50.91%), Postives = 37/55 (67.27%), Query Frame = 0
Query:   18 SHEDVCAVCKEEGNLLCCDFCPATHHLTCLDPPMLALPSENVQWACPACSAKVEV 72
            +H+D C +C++ G +LCCD CPA  HLTCL PP+ A+P  N  W CP C  + EV
Sbjct:  470 AHDDFCRICRQSGEVLCCDTCPAVFHLTCLTPPLEAVP--NSSWHCPLCETEQEV 522          
BLAST of mRNA_M-pyrifera_M_contig8064.18876.1 vs. uniprot
Match: A0A811KH98_9BILA (Hypothetical protein n=1 Tax=Bursaphelenchus okinawaensis TaxID=465554 RepID=A0A811KH98_9BILA)

HSP 1 Score: 70.9 bits (172), Expect = 5.620e-9
Identity = 29/67 (43.28%), Postives = 40/67 (59.70%), Query Frame = 0
Query:    2 CSCVGFPGLKAIAANFSHEDVCAVCKEEGNLLCCDFCPATHHLTCLDPPMLALPSENVQWACPACSA 68
            C   G P  K I     + + C  CKE G++LCCD CP+++H+ C+DPP+  LP     WACP C+A
Sbjct:  273 CETEGVP-KKEIEEKKGNMEYCRACKEGGSILCCDSCPSSYHVYCIDPPLEELPPSEEHWACPRCTA 338          
BLAST of mRNA_M-pyrifera_M_contig8064.18876.1 vs. uniprot
Match: A0A7M7MCI1_VARDE (Uncharacterized protein n=9 Tax=Varroa TaxID=62624 RepID=A0A7M7MCI1_VARDE)

HSP 1 Score: 70.9 bits (172), Expect = 5.830e-9
Identity = 28/48 (58.33%), Postives = 36/48 (75.00%), Query Frame = 0
Query:   19 HEDVCAVCKEEGNLLCCDFCPATHHLTCLDPPMLALPSENVQWACPAC 66
            H+D C VC + G+LLCC+ CPA +HLTCLDPP+  +PSE+  W CP C
Sbjct:  333 HDDHCRVCHKLGDLLCCEQCPAVYHLTCLDPPLETVPSED--WVCPVC 378          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8064.18876.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KW77_9PHAE9.300e-6859.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FS64_ECTSI1.460e-6458.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A1W4VIZ2_DROFC1.500e-950.85chromodomain-helicase-DNA-binding protein 3 n=1 Ta... [more]
A0A0R3VSS9_TAEAS2.010e-952.73Uncharacterized protein n=1 Tax=Taenia asiatica Ta... [more]
A0A0R3X3Z5_HYDTA2.010e-953.70Uncharacterized protein n=1 Tax=Hydatigena taeniae... [more]
UPI001885BB484.340e-950.00autoimmune regulator n=1 Tax=Syngnathus acus TaxID... [more]
W6UFA6_ECHGR4.430e-950.91Nucleosome-remodeling factor subunit BPTF n=1 Tax=... [more]
A0A068YJE0_ECHMU4.580e-950.91Fetal alzheimer antigen falz n=2 Tax=Echinococcus ... [more]
A0A811KH98_9BILA5.620e-943.28Hypothetical protein n=1 Tax=Bursaphelenchus okina... [more]
A0A7M7MCI1_VARDE5.830e-958.33Uncharacterized protein n=9 Tax=Varroa TaxID=62624... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 22..67
e-value: 4.0E-10
score: 49.6
IPR036427Bromodomain-like superfamilyGENE3D1.20.920.10coord: 19..100
e-value: 8.6E-16
score: 60.5
IPR019787Zinc finger, PHD-fingerPFAMPF00628PHDcoord: 22..68
e-value: 5.5E-8
score: 32.6
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 20..69
score: 9.891
IPR042163PHD finger protein 12PANTHERPTHR46309FAMILY NOT NAMEDcoord: 20..176
NoneNo IPR availablePANTHERPTHR46309:SF1PHD FINGER PROTEIN 12coord: 20..176
IPR019786Zinc finger, PHD-type, conserved sitePROSITEPS01359ZF_PHD_1coord: 2..66
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 17..71

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig8064contigM-pyrifera_M_contig8064:10331..12327 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig8064.18876.1mRNA_M-pyrifera_M_contig8064.18876.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig8064 10331..12336 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig8064.18876.1 ID=prot_M-pyrifera_M_contig8064.18876.1|Name=mRNA_M-pyrifera_M_contig8064.18876.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=579bp
MCSCVGFPGLKAIAANFSHEDVCAVCKEEGNLLCCDFCPATHHLTCLDPP
MLALPSENVQWACPACSAKVEVTEMTAPQQKPKRERKDGKKRQRASSATA
GSPRDSGEGAGTSFTIPKRKKEQKRAKAQGPPRGGASAQEGLESHKSPRV
KMEGKEGKPTRDAAAGGGGGDGGGSSTRIANAPKQPRVLPRMGLGLADAA
AAAEILAMRGQDVCGSRHARIPSKSMMSLAVAAASVAASEAAAAVAAAAT
VAATAAAAAPPPAPAPPAPPKALGLKKLLHQRVQYDEASANPTSAFSPKK
LLKHRLLAAHANQQQASSAPAPAPTLATTPATAPALAPTPKMEGGGLGYG
VDEKNEPSPRGDPATTGGGPCEGGRFEGGGDNGSAGGRWEGDGGSGGGGF
TASREGEVGGRGFGGAATFGGGRRVVAADGATVNGGHAGESGDYSRRYGM
RVGGEDSGGVGGIGGSGGGGGAGGGSGGGSNGQDLGGDVGGEESLGDGRN
RAMGAGCDKGEVGAGDDREPNPLNGMHVAPGVRKGNPKEEAMRFAQGADA
AERSHGGGGDAGRWPGGGEVERRDAPREH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001965Znf_PHD
IPR036427Bromodomain-like_sf
IPR019787Znf_PHD-finger
IPR042163PHF12
IPR019786Zinc_finger_PHD-type_CS
IPR011011Znf_FYVE_PHD